Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00365 ATCAGTGTTTGCTTCTTACGCTGTTGGGCCATTTTTTCTTTCTTTTTTAGCAACACTGCTTCTCTGTTCCCGTCTAATCAATGATGCTCTGTTCTGTTTTTCTTTGACTTGTTTGGTTTAGTTCCAATAGGTTATCATTGCCAACAACCAGAGAGTGTGATTTTCTTTTGGGTGTGTTGTGGAATTTAGAGATTCTTCTTCCATAGTGAGTTGTGACCAGTTGCAGAGGGGTATATGGTATATCTTGTTTCTTGTGGACTACACGGATCTCCTCTTTTTCCTTTCTTCTTTCCCACTTTTCGGATAGAATGAACCACGGTTTGGCAGAGAGGTATAAAGTAAAAGCTGCAAGTGGGATTTGTTCCAATTTGCTTTTTTGTAACTAGAAACGAAAACAAGGGTACTTGAAGGTGAAGCACAAGTGAGTCAAGTGTGAAGTGAATGATGGAGGGTGGAGGAAGAGAAGGTTATAATGGAATGGTCACGACCATGACAAGAGACCCCAAACCAAGGCTTAGGTGGACAGCAGATCTTCATGACCGCTTTGTGGATGCAGTCACAAAGCTTGGTGGCCCCGATAAAAACGACATTAATATGAAACGGTTTATTTTGTATTCAGAAGCGACTCCCAAGTCTGTTCTGAGGTTAATGGGGTTGAAAGGTCTGACACTATATCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAGCAGGCTCGGAAACAAAATGAAGATCTGCACAAAGAAAATAATGGATGTTCGTATGTAAATTTTAATAATCGTTCTTCTGCGCCTAACACCAGTTACAGAGGTGATCATGAAGGGGGAGAAATTCCAATAGCAGAAGCACTGAGGCGTCAGATTGAAGTTCAAAAAAGACTTGAAGAGCAGCTGGAGGTACAAAAGAAGTTGCAGATGAGAATAGAAGCCCAAGGAAAGTATTTGCAAGCAGTGTTAGAGAAGGCCCAGAGGAGTCTTTCCCTGGATGGGCCAGGCAGTCTTGAAGCATCAAGAGCTCAATTGACTGAATTCAACTCTGCTTTGACCAATTTCATGGAAAATGTGAATAAAGATAGCAAAGAAAACATAATAGAAGTGAATGATTTTTATAGTAAGAGCCATGACTCAGCTTTCCATTATGAGGGCACAGGGGGAGAACAAAATAGGGATCATAAGCCCAAGGTTCAAGGGGGTTCAATACAGTTTGATTTAAACATCAAAGGTAGCAATGACCTTGTGTCTTCAGGTGGTGGAGCTGAAATGGATGCCAATATGATTTCGTATAGGCTATAAATCTTTTGAATTCTCACATGTTAAGTTAGCCATTAGATTGAATGATATATACCCCTTCTCCTAGCTATTCTTAATAATTTTCACTGAAGTTGCATACCAGGACAGCCTGTTACATCTAGTACCTTTTCTAAAGGAAACTGCCTATTCCCAATTTTC 1452 0.4029 MMEGGGREGYNGMVTTMTRDPKPRLRWTADLHDRFVDAVTKLGGPDKNDINMKRFILYSEATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQARKQNEDLHKENNGCSYVNFNNRSSAPNTSYRGDHEGGEIPIAEALRRQIEVQKRLEEQLEVQKKLQMRIEAQGKYLQAVLEKAQRSLSLDGPGSLEASRAQLTEFNSALTNFMENVNKDSKENIIEVNDFYSKSHDSAFHYEGTGGEQNRDHKPKVQGGSIQFDLNIKGSNDLVSSGGGAEMDANMISYRL 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00365 284 Gene3D - 21 92 - -
Pste1g00365 284 Coils Coil 135 165 - -
Pste1g00365 284 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 13 226 IPR044848 GO:0003700
Pste1g00365 284 Pfam MYB-CC type transfactor, LHEQLE motif 133 178 IPR025756 -
Pste1g00365 284 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 90 IPR006447 GO:0003677
Pste1g00365 284 SUPERFAMILY Homeodomain-like 22 92 IPR009057 -
Pste1g00365 284 Pfam Myb-like DNA-binding domain 25 88 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00365 Pste-Chr1 1285950 1288845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00365 16 204 G2-like Transcription Factor Family AT4G13640 48.469 3.13e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste1g00365 Myb_DNA-binding 5.1e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00365 1 1285950 1288845 Pste1g00365 1 1285950 1288845 ECH