Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00348 ATGTCTTTGAACGTGATGCTTCTTCTAGTGGGTCTTTTTGTTTTACAAAGTTTTCTAATACCAAACTGCTACTGCCAGACCAATAATCCTCAGAATATTGAAACATTTTATCCAATCCGAACAGTAGAACCACCCCTCCCAATCTCACCTCATAAGCCAGCACCAGGACCAGTGGCTGCATCAAAATCGTCTTCATCAAGCAGTAAGGTTGGAACTGCTGTGGCTGCAACTGCTGCAAGTACTTTACTTGTTTCTGGTTTGATTTTCTTAATGGTTCAAAGGTGCTTCAGAGCAAGGAAGAGAAAGGAGATAAGAAGAAACACTGCTTCTGCTGTAGATAAGGGAGCTGCGCCTCAGGCACAAGTGTTTGAGAGAATGAATGGAAACGTCAAGGGACTGATTGTTGATGAGGATGGTTTAGATGTGGTTTATTGGAGAAAACTTGAAGGTAAAAAATTAACAGACATGGAATTCCAAAGGGAGGTTTTGGACAGTCCCAGAGGCAATGAAGAAGATGATCATGAGAGGAATCCAAGGCAAAGATGTGAGTCCATTCAAGAAAGTCCTCTTCTTAGGGAAAAATCTTCAACTCCTCACATGAATATATTTCTTCCAGAGGAATCATATACAGTCATGAGAATTCCACCTCCTGCTCCTCCTCCTAGTATTCCTTCACCACTTGGAGGCTCTAATTTTCCACCATCTTCTCCACTCTTTTCCCCATCATCACCAAAACCAATCTCCACTTTTTTTTCATCAATTCCAAACATATCAAATCCTTCACCAACAATACCTGATAGAAATACTCAAACACCAGCACCACCTCCTCCTCCACCAATCCCTGGTAGAAAGAGCTCAACACCACCACCACCACCACCTCCTCCACCAATCCCAAATAAAAGAACTCCAGCAGCAGCACCACCACCTCCTACACCAATCCCTGCTAGAAAGAGTCCAGCACCACCTCCTCCTCCACCAAAGGCAAGTGCTTCGAAGTCACCATCAAAACCACCACCTACCCCTGCTGAAAGAACACGACGTACCACAAGTAAGCAAGGAAACACTTCTTCTGAGGTAAAACTGAAGCCATTGCATTGGGATAAGGTGAATACCAACCTTGATCACTCTATGGTATGGGACAAAATGGACCGTGGTTCTTTCAGTGTTGATGATGATCTTATGGAAGCTCTTTTCGGGTTAGTCGACACCAACGGAAATGATAATGCCCCAAAAGTAAATTACTCAATGAGTCCTAGCAGGGATGCTTTGGCTCCATCAGCGCTTACCTTTCTGCTTGACCCCAGAAAATCACAAAACATTGCTATTATTTTGAAGTCTCTGGCAGTCTCACGTAAAGATATTATCGAAGCACTCGTTGATGGTCAATGTCTTGACACCGATACCATTGAAAAGCTTGGTAGAGTAGCGCCAACGGAAGAAGAGCAAGCACTTATACTTGCATATGAAGGAGACCCTTCAAAACTTGCTGCAGCCGAATCTTTCCTACATCACATCCTCAAAGCTGTTCCTTCAGCATTTAAGCGCTTGAATGCTTTATTATTCAGGTTGAATTATGATTCTGAGATTGTAGAAATCAAGGAGTTTCTGCAGACTCTTGAGATGGGGTGTACGGAGCTTCGAAACCAAGGAATGTTTGTGAAGCTTCTTGAAGCAGTGCTTAAGGCTGGAAATCGCATGAATGCAGGTACTCAAAGGGGTAATGCTCGAGCTTTCAACTTGGCTTCTCTCAGAAAGCTCTCTGATGTCAAGAGCACTGATGGAAAAACCACATTGCTTCACTTTGTGGTTGAAGAAGTAGTTCGCTCTGAAGGAAAACGTGCGGTACTTAACCGCAATCAGAGTTTTAGTAGCAGTAGGAGCAGCAGCAACACTGAAGACTCTCGGAACTCTTCTACTTCAAATGAACAAAAACAAAAGGAATATATAACACTAGGATTGCCAGTCGTAGGAGGGATCAGTTCTCAGTTTTCCAATGTAAAGAAAGCTGCAGCTACAGATTACAACAGTTTTGTTGGTTCAATTTCATCTCTCTCAGCCAGGATTTTAGAGATTAGAGAACTTGTTTCCCAGTGCGGAAATGACAAGGGAGGCAACTTTGTGAGAGAAATGAACCATTTTCTTAACACTGCTGTGGAGGAATTGAGATTAGTGATGGAAGAGCAAACAAGGGTGATGCAACTTGTGAAAAGAACAACAGATTATTATCAAGGAGGAGCTTCAAAAGATAGTGCAGAACACCCTTTTTATCTATTTGTCATAGTTAAAGATTTTCTGGGAATGGTTGACCAAGCATGCATTGATATTGCTCGTAACATGCAAAAGAGGAAGACACCTAAGGTAAATTAA 2367 0.425 MSLNVMLLLVGLFVLQSFLIPNCYCQTNNPQNIETFYPIRTVEPPLPISPHKPAPGPVAASKSSSSSSKVGTAVAATAASTLLVSGLIFLMVQRCFRARKRKEIRRNTASAVDKGAAPQAQVFERMNGNVKGLIVDEDGLDVVYWRKLEGKKLTDMEFQREVLDSPRGNEEDDHERNPRQRCESIQESPLLREKSSTPHMNIFLPEESYTVMRIPPPAPPPSIPSPLGGSNFPPSSPLFSPSSPKPISTFFSSIPNISNPSPTIPDRNTQTPAPPPPPPIPGRKSSTPPPPPPPPPIPNKRTPAAAPPPPTPIPARKSPAPPPPPPKASASKSPSKPPPTPAERTRRTTSKQGNTSSEVKLKPLHWDKVNTNLDHSMVWDKMDRGSFSVDDDLMEALFGLVDTNGNDNAPKVNYSMSPSRDALAPSALTFLLDPRKSQNIAIILKSLAVSRKDIIEALVDGQCLDTDTIEKLGRVAPTEEEQALILAYEGDPSKLAAAESFLHHILKAVPSAFKRLNALLFRLNYDSEIVEIKEFLQTLEMGCTELRNQGMFVKLLEAVLKAGNRMNAGTQRGNARAFNLASLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRAVLNRNQSFSSSRSSSNTEDSRNSSTSNEQKQKEYITLGLPVVGGISSQFSNVKKAAATDYNSFVGSISSLSARILEIRELVSQCGNDKGGNFVREMNHFLNTAVEELRLVMEEQTRVMQLVKRTTDYYQGGASKDSAEHPFYLFVIVKDFLGMVDQACIDIARNMQKRKTPKVN 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00348 788 ProSiteProfiles Formin homology-2 (FH2) domain profile. 351 788 IPR015425 -
Pste1g00348 788 Gene3D Formin, FH2 domain 371 787 IPR042201 -
Pste1g00348 788 MobiDBLite consensus disorder prediction 162 188 - -
Pste1g00348 788 MobiDBLite consensus disorder prediction 213 241 - -
Pste1g00348 788 MobiDBLite consensus disorder prediction 242 266 - -
Pste1g00348 788 MobiDBLite consensus disorder prediction 267 341 - -
Pste1g00348 788 SUPERFAMILY Formin homology 2 domain (FH2 domain) 429 783 - -
Pste1g00348 788 MobiDBLite consensus disorder prediction 342 359 - -
Pste1g00348 788 MobiDBLite consensus disorder prediction 618 644 - -
Pste1g00348 788 MobiDBLite consensus disorder prediction 162 199 - -
Pste1g00348 788 MobiDBLite consensus disorder prediction 213 363 - -
Pste1g00348 788 PRINTS Proline rich extensin signature 214 226 - -
Pste1g00348 788 PRINTS Proline rich extensin signature 270 291 - -
Pste1g00348 788 PRINTS Proline rich extensin signature 292 308 - -
Pste1g00348 788 PRINTS Proline rich extensin signature 253 265 - -
Pste1g00348 788 PRINTS Proline rich extensin signature 309 326 - -
Pste1g00348 788 SMART it6_source 351 783 IPR015425 -
Pste1g00348 788 Pfam Formin Homology 2 Domain 356 768 IPR015425 -
Pste1g00348 788 PANTHER FORMIN-RELATED 45 779 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00348 Pste-Chr1 1238449 1240899 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00348 328 784 FH2 protein (formin) Gene Family AT1G70140 55.150 2.80e-172 513
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00348 1 1238449 1240899 Pste1g00348 1 1238449 1240899 ECH
Pste1g00348 1 1238449 1240899 Pste7g00785 7 7150084 7153213 PCT