Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00312 GAGATGATGGTGTAGGAGCTTCAAATAAAGGGACCGTAGAGAGGAGGGTGTATAGATGGATGGTGGTGTGGTATAATAGGAAGATGAAGAAGCAGCAGTTTCTCTCTCTCTCACTCATCTCTAGCAGTACCACCAACAAAACCCACTGAAGCAAATTATCATGATGAAACTCCCTCTGCACCCTGCACTCCGAAAAAGCGATTGTCATCCTCATCAAAACCTTCCTTCCCTTAAATTTACCCCTTTGAACACCACCCCCTTCTCATCCACAACTCCCACCACCCCAAAACCATGAAACCTTTTCTTCTCTTTCTCACATTCTCCTTCCTCTGTCAAGCACACCCACTCTTAGTTTTCTCTGCCACAACCCTGCCCCTCCAACTCATCGCCCTCCTCTCAATAAAATCAACCCTCCTAGACCCTCTCAATAACCTCCATGACTGGGACCCCTCCAACTCCAATAATCCGTGCTCCTGGAGAGGCATCACATGCCACTCAAAAACAGCACAAATCATCACTCTCAACCTCTCCCACCTCAATCTCTCCGGCACAATCTCCCCCCAAATTCGCCACCTATCCGCCTTAAACCACCTTAACCTCAGCGGAAATGACTTCAGTGGGAGTTTCCAATATGCCATTTTTGAACTAACAGAGCTAAGAAGTCTAGACATCGCTCGCAATTCCTTCAACTCAACCTTCCCACCCGGCATATCAAAGCTCAAGTTCCTCAGGCACTTGGACGCCTACAGCAACAACTTCACCGGCCCTCTCCCCCAAGAGTTAAGCACCCTTCGTTTCCTGGAACACCTCAACCTCGGCGGAAGCTACTTCAGCGACGGAATTCCTCCAAGTTATGGCACTTTCCCCAGGCTCAAGTTTCTAGACTTAGCTGGCAACGCCTTGGTAGGTCCACTCCCACCCCAACTAGGGCACCTGGCAGAACTAGAACACTTGGAAATTGGATACAACAATTTCTCAGGAACACTACCCCCTCAACTGGCATTGCTCTCTAACCTCAAATACCTGGACATCTCATGCACCAACATCTCAGGAAAGGTGATCCCGGAGCTGGGAAACCTGGCCAAGCTGGAGACCCTTCTGCTGTTCAAAAACAGGTTAACAGGGGAAATCCCATCAACCATAGGTAAACTTAAGTTCCTCAAGGGCCTTGATCTCTCTGATAATCAACTGACAGGACCTATCCCCACACAACTCACCATGCTAACACAACTAACCATGCTCAACCTAATGGAGAACAACCTAACCGGACAAATACCGCAGGGAATTGGGGAACTGCCAAAGCTAGAGATTCTCTTCCTCTTCAACAACTCACTCAGTGGAACCCTCCCGGAGCAACTCGGCTCCAACGGGCTGCTACTCAAACTCGACGTTTCCACAAACTCACTGGAAGGTCCAATCCCTCAGAATGTGTGCAAAGGTAACAGGCTCGTCAGACTCATACTCTTCCTCAACAGATTCACCGGTTCTCTCCCCCCATCCCTTGCCAACTGCACCTCTCTCACTAGGGTTCGCATCCAAAACAATTTCCTCAACGATTCAATCCCCCAAGGCCTCACGCTCCTCCCTAACCTCACATTTCTCGATATCAGCAACAACAACTTCAATGGCCAAATTCCGGAACGGTTAGGCAACTTGCAGTACTTGAATATCTCCGGAAACTCGTTCGGGACCTCCTTACCTGCATCTATTTGGAATGCAACTAATCTTGCCATCTTCTCTGCTGCTTCGTCGAACATCACCGGTCAAATTCCCGATTTCATAGGGTGTCAGGCATTGTATAAGCTAGAATTGCAGGGAAATGCCATCAACGGTACGATTCCATGGGACATTGGACACTGCCAGAAGCTCATTTTACTGAATCTGAGTCGAAACTCGCTCACCGGAATCATTCCCTGGGAAATCTCCACTCTACCTTCCATCACCGACGTTGATCTCTCTCACAATGCCCTCACCGGAACCATTCCTTCCAACTTCAACAACTGTTCCACGCTCGAGAATTTCAACGTCAGTTTCAACTCCCTCAGCGGTCCAATTCCGTCGTCCGGCATTTTTCCGAACCTGCATCCTTCGTCATACTCCGGCAACCAGGGATTATGCGGAGGCGTGTTGGCGAAACCGTGCGCCGCAGACGCACTGGCGGCCTCAGAGAACGAGGTGGACGTCCGGCGGCAGCAGCCGAAGCGAACAGCGGGTGCAATAGTGTGGATCGTGGCGGCGGCGTTCGGGATCGGGCTCTTCGTGCTGGTAGCCGGGACGCGGTGCTTCCACGCGAACTACAACCGTGGGTTGGGCGAGGAGGTGGGGCCGTGGAAGTTAACGGCGTTCCAGCGGGTGAATTTCACGGCAGAGGAGGTGCTGGAGTGTTTGTCGCTGTCGGATAAGATATTGGGGATGGGATCGACGGGAACGGTATACAGAGCGGAAATGCCAGGTGGCGAGATAATAGCGGTGAAGAAGCTATGGGGGAAGCAGAAGGAGAATATCCGACGGAGGAGAGGGGTTCTGGCGGAGGTGGAGGTGTTGGGAAACGTGAGGCACAGGAACATCGTGAGACTGTTAGGGTGCTGCAGCAACAGGGAGTGCACCATGCTGCTTTACGAGTACATGCCCAACGGGAACTTGGATGATTTGTTGCATGCAAAAAATAAAGGTGATAATTTAGTTGCTGATTGGTTGACTAGGTATAAAATAGCCCTTGGCGTGGCTCAGGGAATCTGCTATCTTCACCACGACTGTGATCCCGTTATCGTCCACCGCGATCTAAAACCTAGTAACATCTTACTGGACGCTGAGATGGAGGCCAGAGTCGCTGATTTTGGCGTCGCCAAGTTGATTCAGACCGACGAGTCCATGTCTGTCATTGCCGGTTCCTATGGTTACATTGCTCCAGAATATGCTTACACTCTTCAAGTGGACGAGAAGAGTGACATTTACAGCTACGGAGTGGTGTTGATGGAGATTCTAAGTGGAAAACGTTCTGTGGATGCAGAATTTGGAGATGGAAACAGCATAGTTGATTGGGTTAGGTCTAAGATAAAGTCAAAAGATGGCATTGATGATATATTGGACAAGAATGCAGGGGCGGGATGCACCTCGGTCAGAGAAGAGATGATACAGATGCTTAGAATTGCATTGCTTTGTACCAGCAGAAACCCAGCGGATAGACCATCCATGAGGGATGTTGTGCTCATGCTGCAAGAGGCCAAGCCAAAGAGGAAATTGCTTCATGCTCTTGTAATACCTCCATGTGCACGGGACAATGCTTTGCCACAAAAGCCAACCGCTGATCAATGCTAATGTGTTTATATCTTTCAAATCTTTTTTCTTTTCTTTCTTATTGTGGGGGATTGGTATAGAACAAAGTCATTTTCTATTTTACTTTCAATGGAATTTCAAGTATTACTTGTTCTAGTTTTTCTCCTGTTATATATCACTCTTGTTTCCTATGCTTATATACTAAAACTTGTGTGTGTGTGCGGCTCATGTGGTTACTGTTGCCTCCCAC 3526 0.4906 MKPFLLFLTFSFLCQAHPLLVFSATTLPLQLIALLSIKSTLLDPLNNLHDWDPSNSNNPCSWRGITCHSKTAQIITLNLSHLNLSGTISPQIRHLSALNHLNLSGNDFSGSFQYAIFELTELRSLDIARNSFNSTFPPGISKLKFLRHLDAYSNNFTGPLPQELSTLRFLEHLNLGGSYFSDGIPPSYGTFPRLKFLDLAGNALVGPLPPQLGHLAELEHLEIGYNNFSGTLPPQLALLSNLKYLDISCTNISGKVIPELGNLAKLETLLLFKNRLTGEIPSTIGKLKFLKGLDLSDNQLTGPIPTQLTMLTQLTMLNLMENNLTGQIPQGIGELPKLEILFLFNNSLSGTLPEQLGSNGLLLKLDVSTNSLEGPIPQNVCKGNRLVRLILFLNRFTGSLPPSLANCTSLTRVRIQNNFLNDSIPQGLTLLPNLTFLDISNNNFNGQIPERLGNLQYLNISGNSFGTSLPASIWNATNLAIFSAASSNITGQIPDFIGCQALYKLELQGNAINGTIPWDIGHCQKLILLNLSRNSLTGIIPWEISTLPSITDVDLSHNALTGTIPSNFNNCSTLENFNVSFNSLSGPIPSSGIFPNLHPSSYSGNQGLCGGVLAKPCAADALAASENEVDVRRQQPKRTAGAIVWIVAAAFGIGLFVLVAGTRCFHANYNRGLGEEVGPWKLTAFQRVNFTAEEVLECLSLSDKILGMGSTGTVYRAEMPGGEIIAVKKLWGKQKENIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGDNLVADWLTRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDAEMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDAEFGDGNSIVDWVRSKIKSKDGIDDILDKNAGAGCTSVREEMIQMLRIALLCTSRNPADRPSMRDVVLMLQEAKPKRKLLHALVIPPCARDNALPQKPTADQC 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00312 1008 Gene3D Ribonuclease Inhibitor 453 498 IPR032675 -
Pste1g00312 1008 Gene3D Ribonuclease Inhibitor 382 452 IPR032675 -
Pste1g00312 1008 Pfam Leucine Rich Repeat 454 473 IPR001611 GO:0005515
Pste1g00312 1008 FunFam Leucine-rich repeat receptor-like protein kinase 30 185 - -
Pste1g00312 1008 ProSitePatterns Protein kinases ATP-binding region signature. 706 729 IPR017441 GO:0005524
Pste1g00312 1008 Pfam Protein kinase domain 703 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00312 1008 Gene3D Ribonuclease Inhibitor 279 381 IPR032675 -
Pste1g00312 1008 FunFam Leucine-rich repeat receptor protein kinase EMS1 186 283 - -
Pste1g00312 1008 SMART LRR_typ_2 191 215 IPR003591 -
Pste1g00312 1008 SMART LRR_typ_2 119 143 IPR003591 -
Pste1g00312 1008 SMART LRR_typ_2 452 476 IPR003591 -
Pste1g00312 1008 SMART LRR_typ_2 547 570 IPR003591 -
Pste1g00312 1008 SMART LRR_typ_2 263 287 IPR003591 -
Pste1g00312 1008 SMART LRR_typ_2 335 359 IPR003591 -
Pste1g00312 1008 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 670 778 - -
Pste1g00312 1008 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Pste1g00312 1008 Gene3D Phosphorylase Kinase; domain 1 683 778 - -
Pste1g00312 1008 Gene3D Ribonuclease Inhibitor 31 181 IPR032675 -
Pste1g00312 1008 Gene3D Ribonuclease Inhibitor 182 278 IPR032675 -
Pste1g00312 1008 SUPERFAMILY RNI-like 280 588 - -
Pste1g00312 1008 Gene3D Ribonuclease Inhibitor 499 619 IPR032675 -
Pste1g00312 1008 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 239 977 - -
Pste1g00312 1008 Gene3D Transferase(Phosphotransferase) domain 1 779 987 - -
Pste1g00312 1008 ProSiteProfiles Protein kinase domain profile. 700 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00312 1008 FunFam leucine-rich repeat receptor-like protein kinase TDR 779 987 - -
Pste1g00312 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 826 838 IPR008271 GO:0004672|GO:0006468
Pste1g00312 1008 FunFam Leucine-rich repeat receptor-like protein kinase TDR 308 619 - -
Pste1g00312 1008 SUPERFAMILY RNI-like 77 380 - -
Pste1g00312 1008 SUPERFAMILY Protein kinase-like (PK-like) 703 975 IPR011009 -
Pste1g00312 1008 Pfam Leucine rich repeat 501 560 IPR001611 GO:0005515
Pste1g00312 1008 SMART serkin_6 700 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00312 Pste-Chr1 1127390 1131235 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00312 6 983 Receptor kinase-like Gene Family AT1G08590 42.631 0.0 757
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste1g00312 Pkinase 5.7e-47 CL0016