Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00309 GGTTCCTTGGTGAGTACAAGTGAATACTTAATATGCAACGATAGCATCCTTGAATCCCTACCATTTTACCTATCAATCATGTCTGAAATCTTGCTACTTTTCTCCGAGGTAACCGCCCTAACCCCTCACTCTTTCTAAATGCAGATTTCCCTCTTTCTCTTTCTCTTTTTCTCTCCCTCTCCCACTCCCAGATTCACCCTCTTTCCCTCTTCTGCATAAATACCATGAGCGTTCCTCCGCCGTCTACGGCGGCCATGTGGACGCCGTTCACGGCGGCGCAGTGGCACGAGCTCGAGCACCAGGCCCTCATCTTCAAGTACCTCAAAGCCGGTCTCTCCGTCCCCCCTGACCTCCTTCTCCCCATTCGCAAGAGCCTCCAATTGATGTCTCACCCATCTCTTGGGGGTTATTATGGGAAGAAGATAGACCCTGAACCGGGTCGGTGCAGGAGGACTGATGGGAAGAAGTGGAGGTGTTCAAGGGATGCTCACCCTGACTCCAAGTACTGCGACCGCCATATGATACGACGTCGTTACCGTTCAAGAAAGCCTGTGGAATCTCAACCTCACTCTTCATCTTCTTCTGCTACTTCAAACCCTCCTGCTGCTGCTTCTGCTACTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCCTCCGCAGCTGCACCTGCAACCGCAACCACCCTTCCCTTGCACACCAATGGTGCCAGAGAAGCTTTTACTTTCTCCCTTGGGAACAGCACCAACACCACCCTCCCCCACCTTCACATGGACCCCCTCACTCTTTCAGCTGACAATACCAAGAAAACTTACAGGGCATGGTGTGTTACCTTGTCAGAATGTGAATGGATTGATGAAATGGGAAATCTAGGATTTACTGCTGATTGCATGTTTGGACTGAACTCAGAAGCAGATGAGCACAACGTCTTACAGAAAGATCTGGGAAATGTGAGGTATCAAGGTTATGACTTTACCTCAGATGCTGTGTGGTCTCATATGTCTCAAATGCCATCAAATACTGTTTCTGAGTCAAGAAGTGGTTGTACTATGCTTGGCAACTGCTTCCAACAGCAAACAATGCGAGATGCCGAACTGTTGAACCTAGAAACAGCAAGGACCAAAGACCTTGTCTTTAGTGGCCAGTTAGGTTCAGCAGGGAGTTTGAAACAGGAATATCAGTCCCCTCAGTCTCTCTTCAGTGATTGGGACTGGAAGAAGGATTTAAGTTCCTCTGCTATTGAGTATAGACCCACCAAGGATTTTAACTGCAATCCGGATGTTAATGTTGATTAAAATGGTTCCTTTATAAGGCTTGGAAGGAGTGTTTTTTGTGTCTTATGATATGTCAGCATCCACCCGAAGGAAGCATTTGAATCAGGAACTGGTCCCCTACCTTTAGTTTTTCCCCAACAAATGGAAATACAAGTCAGGCAGTGATAAATTTTTATCCATGGCATTCAGATACCCAAGGGAATCATGGTTTTAATTTCGTGTTGTTCTTTTATATAACTTAAATACTTGAAGGAGTTATGCTTCTTTACATGTAAGCTTGTAATATTTGTCCGTCTTCTCATTTTTCTTTATTGTAATGGTATGTAGTTTGACTCTTGTCTCCTATGATTGTTAGATTGTGCTATTTTCAGACAACTAGTAAGGTCTTATGGATGTTGAATTATTGTATGAATGATTGTGATTGTGAATGACCAACATTCTTTAACATGGCATTTGGATGTTGTCATCAATCATCAATTATGTGCATGTTGGACTGAGTGTAGAGCCTTGGAACTGATCAACGAAAGTGC 1807 0.4483 MSVPPPSTAAMWTPFTAAQWHELEHQALIFKYLKAGLSVPPDLLLPIRKSLQLMSHPSLGGYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCDRHMIRRRYRSRKPVESQPHSSSSSATSNPPAAASATASASASASASASASAAAPATATTLPLHTNGAREAFTFSLGNSTNTTLPHLHMDPLTLSADNTKKTYRAWCVTLSECEWIDEMGNLGFTADCMFGLNSEADEHNVLQKDLGNVRYQGYDFTSDAVWSHMSQMPSNTVSESRSGCTMLGNCFQQQTMRDAELLNLETARTKDLVFSGQLGSAGSLKQEYQSPQSLFSDWDWKKDLSSSAIEYRPTKDFNCNPDVNVD 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00309 357 MobiDBLite consensus disorder prediction 106 130 - -
Pste1g00309 357 SMART QLQ_2 13 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste1g00309 357 Pfam WRC 69 111 IPR014977 -
Pste1g00309 357 ProSiteProfiles QLQ domain profile. 14 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste1g00309 357 ProSiteProfiles WRC domain profile. 68 112 IPR014977 -
Pste1g00309 357 MobiDBLite consensus disorder prediction 111 130 - -
Pste1g00309 357 MobiDBLite consensus disorder prediction 68 90 - -
Pste1g00309 357 MobiDBLite consensus disorder prediction 67 90 - -
Pste1g00309 357 PANTHER GROWTH-REGULATING FACTOR 5 13 329 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pste1g00309 357 Pfam QLQ 14 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00309 Pste-Chr1 1099606 1103158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00309 14 111 GRF Transcription Factor Family AT3G13960 60.550 5.49e-38 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pste1g00309 WRC 2.7e-19 No_clan