Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00298 ACACTGTCTCCCTCTCATTTTCTGGCTTCAAAATATCGCAACCCCTCCGTCCCTCCCGTCTCTTTCTCTTTCTCTGCATTTCATTCCCAGCTAAGCATTTTCTCTCATTCGCTCGTGTCAGTTCGAGGGAAGAGAAGAAAAACAAAACTGCTACAAAGAGCACCAAAACCTGAAGCGCACAACACCTTCTCTCTGTGTTTCACACAGAGAGACAAAGCACAAGAAGCAGTTGAGCTTTCATTGGAAGAAGAAAAAGCGTGTACGAAGCAAACGGCGGAGGAGGGGGAAGAGAGTGGCACGCCGAGTACAAAAGAAGCCGTCAAAAGCCTGAGTGCGCAGTTAAAGGATATGGCACTGAAGTTTTCGGGTGCATATAAGCAATGCAAACCTTGCACAGGGTCTAGTACCTACAAGAAAGGACAGAGGCCATACCCTGACTTTGACACCATTTCAGAAGGGGTTCCATACCCCTATATTGGAGGTGCAAGCTCAACTTCAACCCCTGCTTGGGACTTCACAAACTCTAATTTCCCTGGTGGTAGATCAGACCAAAGGTTTATGGGAGGTTTCAATGGTGATGGGATCCATACAGGGCCTGAATCAGCATCGGCTTGTGATGTAGTTGTTGAGAATGAGGATGAAACCAAGGAGTGGATGGCACAGGTGGAACCAGGGATTCACATTACCTTTGTGTCTCTTCCTAATGGGGGAAATGATCTCAAAAGAATTCGCTTCAGCCGAGAGATTTTCGACAAGTGGCAAGCTCAAAAATGGTGGGGTGAGAATTATGACAGAATCATGGAACTTTACAATGTGCAGAGATTCAATCGACAAGCTCTCAACACTCCTTCAAGATCTGAGGATGAGCAAAGAGATTCTTCTTACTCAAGACTGACATCTGGACAAGAAAGCCCGGGATCCATGTCGTTAAAGGAGTGGACACCAAGGAATCACTATAAACCCTCAGGGAATAACCCCTCTGAAGCTGTGGATCAAGGTGGTGGCCAAAACTTCCATGCAGGGTCATCCGTGGAACCATCAAGGACAACCACCTCTTCTAGAGATGAACGTTCAGTGAGCAATGCCAGTGACATGGAGACTGAATGGATTGAGCAAGATGAACCTGGAGTGTACATCACAATCAGGCAATTAGCTGATGGAACAAAGGAACTTCGCCGTGTCAGATTCAGCCGGGAGAGATTTGGGGAGGGACATGCAAAGAAATGGTGGGAAGAGAACAGAGAAAGAATACAAGCTCAATATCTTTGAATTGGTTGGTTGGCCTGGAAGAGATGTGGATGTCCTAAGTTGGTGGAATCCTCAATTTTGTTTTCTAGAATGTAGTGTTGTTGACTCCAGTTTCCGGAGTGGAGTTGTATACAGAAACTAGCCTTCTTCCCAATATCATTGGTGATGGTCTCATGGCAGTAATTAAATTGTTGATACTCAAACAATTCAAGCCCAGAATATGCTATTGTGGTGACTCCATTTAAGAGTCAGTCGCCATGGTATTGGGAGGTCTAAT 1525 0.4564 TLSPSHFLASKYRNPSVPPVSFSFSAFHSQLSIFSHSLVSVRGKRRKTKLLQRAPKPEAHNTFSLCFTQRDKAQEAVELSLEEEKACTKQTAEEGEESGTPSTKEAVKSLSAQLKDMALKFSGAYKQCKPCTGSSTYKKGQRPYPDFDTISEGVPYPYIGGASSTSTPAWDFTNSNFPGGRSDQRFMGGFNGDGIHTGPESASACDVVVENEDETKEWMAQVEPGIHITFVSLPNGGNDLKRIRFSREIFDKWQAQKWWGENYDRIMELYNVQRFNRQALNTPSRSEDEQRDSSYSRLTSGQESPGSMSLKEWTPRNHYKPSGNNPSEAVDQGGGQNFHAGSSVEPSRTTTSSRDERSVSNASDMETEWIEQDEPGVYITIRQLADGTKELRRVRFSRERFGEGHAKKWWEENRERIQAQYL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00298 422 MobiDBLite consensus disorder prediction 84 107 - -
Pste1g00298 422 ProSiteProfiles BRX domain profile. 216 271 IPR013591 -
Pste1g00298 422 MobiDBLite consensus disorder prediction 280 369 - -
Pste1g00298 422 MobiDBLite consensus disorder prediction 93 107 - -
Pste1g00298 422 MobiDBLite consensus disorder prediction 295 311 - -
Pste1g00298 422 Pfam Transcription factor regulating root and shoot growth via Pin3 216 270 IPR013591 -
Pste1g00298 422 Pfam Transcription factor regulating root and shoot growth via Pin3 366 421 IPR013591 -
Pste1g00298 422 ProSiteProfiles BRX domain profile. 367 422 IPR013591 -
Pste1g00298 422 PANTHER PROTEIN BREVIS RADIX-LIKE 1 86 422 IPR044532 -
Pste1g00298 422 MobiDBLite consensus disorder prediction 318 366 - -
Pste1g00298 422 Pfam Transcription factor BRX N-terminal domain 96 131 IPR027988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00298 Pste-Chr1 1063653 1070304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00298 86 422 Major Intrinsic Protein MIP AT1G31880 63.920 1.72e-152 434