Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00290 ATGGTTAGCAAGACTAACACAAACAACAACAAAAAGGAGAGAGACTTTGAGCTTGTCTTTGAGGAAGATATCGACGAAGGTGTACATCATGATGTTGAAACTGCCAAGTTACAGAGTGAGACTAGCAGCGATGACGAAGGAAATGATGCAACACAGCCTCACTTTTTCACTTCTCAACAATGGCCTCAAAGTTACAAAGAGACAACAGATTCTTACACACTTGCTGCAACTCCACAATTTGAATCAATTCTACGAGGAGCAAGTTTTAGATATTCCAATCGTTCAAATAATAACTTAGACATAGACGACAGAAAGACTCCTTTTCTCTCTAGTCATGAAGGTGTTACGCAATCAACATTGTCTAGGGAAGGTTCTGTGCAGAGGCAATTATCTAGTGAATTGCCCGTTGGTCAAGGATGCAGCTTCGTTCAAACAGTTTTCAATGCGACTAATGTGATGGCTGGAGTTGGCATTTTGTCTACACCTTACACAATAAAAGAAGCTGGTTGGGCGAGCATGGTGTTGATGGTTCTTTTTGCAGTCATTTGTTGCTATACAGCTACCCTTATGAGATACTGCTTTGAGAGCAGAGAAGGAATTAGTAGCTACCCAGATATAGGAGAAGCTGCATTTGGAAAATTTGGTCGTATCATTGCATCATCATGTTGTGTGGAAATCATCACCTTGGAAGGAGATAACCTAACAGGGCTATTTCCAGGAACATCTTTAGATTTGGGCAGTTTGCAGTTAGACTCTGTGCACTTGTTTGGAATTTTGGCTGCTCTTATTATTATCCCAACTGTTTGGCTAAAGGATCTTCGTATGATCTCTTTGTTGTCAGCTGGAGGGGTTTTTGCAACACTGTTGATTATTATTTGTGTGATTTGGGTTGGGACAATAGATGGTGTAGGATTCCACCACACTAGTCAATTCGTCAATTGGAGTGGCATTCCATTAGCTATTGGTATACACGGGTTTTGCTTTGCAGGACATTCAGTTTTTCCAAATATTTACCAATCTATGGCCGATAAAAGACAGTTTACTAAAGCAGTCATAATATGTTTCATATTGTCTGTTACAATATATGGAGGTGTTGCAATCATGGGATTTCTCATGTTTGGTGGTGGCACTTTGTCTCAAATAACATTAAATCTGCCACCTAGTGCACTTGCTTCCAAGGTTGCAATATGGACAACAGTAATTAATCCATTAACTAAATATGCTTTGTTGATGAACCCATTGGCAAGAAGTCTGGAGGAATTGCTACCAGATATAGTCTCAAGTACTTATTGGTGTTTCATTCTTCTTAGAGCAGCCCTTGTTGCATCTACAGTTTGTGCTGCCTTTCTGATTCCATTTTTTGGTGAGTCTTAA 1374 0.3974 MVSKTNTNNNKKERDFELVFEEDIDEGVHHDVETAKLQSETSSDDEGNDATQPHFFTSQQWPQSYKETTDSYTLAATPQFESILRGASFRYSNRSNNNLDIDDRKTPFLSSHEGVTQSTLSREGSVQRQLSSELPVGQGCSFVQTVFNATNVMAGVGILSTPYTIKEAGWASMVLMVLFAVICCYTATLMRYCFESREGISSYPDIGEAAFGKFGRIIASSCCVEIITLEGDNLTGLFPGTSLDLGSLQLDSVHLFGILAALIIIPTVWLKDLRMISLLSAGGVFATLLIIICVIWVGTIDGVGFHHTSQFVNWSGIPLAIGIHGFCFAGHSVFPNIYQSMADKRQFTKAVIICFILSVTIYGGVAIMGFLMFGGGTLSQITLNLPPSALASKVAIWTTVINPLTKYALLMNPLARSLEELLPDIVSSTYWCFILLRAALVASTVCAAFLIPFFGES 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00290 457 MobiDBLite consensus disorder prediction 44 62 - -
Pste1g00290 457 Pfam Transmembrane amino acid transporter protein 140 455 IPR013057 -
Pste1g00290 457 PANTHER OS05G0424000 PROTEIN-RELATED 145 456 - -
Pste1g00290 457 MobiDBLite consensus disorder prediction 27 43 - -
Pste1g00290 457 MobiDBLite consensus disorder prediction 27 62 - -
Pste1g00290 457 FunFam Amino acid transporter AVT1A 138 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00290 Pste-Chr1 1031470 1034012 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00290 8 457 Amino Acid or Auxin Permease AAAP Family AT2G41190 60.294 0.0 543