Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00279 CACTGCATACAAAACCAATGTTAACAGCCTCATCTCTTGGGTAACGACTGACTCATTCACAAGCAAAAGATTTAACTACACCTTCATACTGATGACAACAATGTCAACGGTTCCGATGATATACGACATCACAGGATATTTGTGTCAGTTCTGTCTTACCAGTGCTGCCAACGACATCTCTGGGCTGTGTCCTAACAGTGTAACCGCTATCATATGGTATGATGACTCAACTAAAGTTGAGAGAATGGAGAGTGCTATGAAGGGTTTGATTACAAAAGCAACCATAGAGACAAAGCAGTTTTGGGCAGTGGAGGAGTTCCATTGGGCTGAAAATGAGACATTGTATGGATGGGTTCAGTGTGATAGGGACCTTCCAAGTGATGATTGTGGGCAGTGTTTGTATGCTTTGTTAGACTTATTTCCACAATGTTGTGCCACAAACTTACAATGGGCAATTTTTGCTCCAAGCTATTGTGAATCAGGCAAAGGAGGAACTGGTAAGTCAAGAAAGTTGATCATTTACTTAAGTGTCTTGGGGTTTTTTTGCTATGTTTCAGTGTCTACTTCTTCTGGTACAGGAAACGAGTTAGAAAAGATTAGAACGCTCGATGAGGAAACATGGAATGGAGACTTACCAACAATCCCATTAATCACAATTCTACAAAGTACTAATAACTTTTCAGAAACTTCTGAATTAGGGGAAGGTGGATTTGGCTTTGTTTTCAAGGGAATGCTACCAAATGGAAGACCAATTGCAGTAAAAACTCTCAAAATTCTCTGGTCAAGATTTCTTCTCTATGTTTATGTTCTCATATATGAGAAAAAAATGCAGCTTGATTGGAACATAAGATTAAGCATTATCAATGGAATAGCAAAAGGTATTGTCTACCTCCATGAGGACTCTCAACTTAGAGTAATTCACAAGGATGTCAAAGCTAGCAATGTGTTATTAGATGATAAGATAAATCCTAAAATATCAGATTTTGGATTAGCAAGAGCATTTGAAATAGAGCAAAATCAAGCAAATACAAAACGAGCTTGGAACGTATGGTGTGCAGGAAAATGTTTGGAATATATTGATCAAGTGTTGGTGAAATCCTTCATAGCTAATGAAGTTGAGAAGTGCTTACACACTGGTTTATTGTGTGTTCAACAAGAAGCAAAAGATAGACCAACTATGTCCATGGTTGTTCTAATGCTGGGAAGTGACACAATGACTCTTCCAAAACCTAATCAACCAGCATATTCAGCCGGCAGAACAACCTTAAATGAAACATCAACTTTAAGAAGTTTCAATAATGATGTAACAATCCCTAACATGTTGCCA 1327 0.3798 MTTMSTVPMIYDITGYLCQFCLTSAANDISGLCPNSVTAIIWYDDSTKVERMESAMKGLITKATIETKQFWAVEEFHWAENETLYGWVQCDRDLPSDDCGQCLYALLDLFPQCCATNLQWAIFAPSYCESGKGGTGKSRKLIIYLSVLGFFCYVSVSTSSGTGNELEKIRTLDEETWNGDLPTIPLITILQSTNNFSETSELGEGGFGFVFKGMLPNGRPIAVKTLKILWSRFLLYVYVLIYEKKMQLDWNIRLSIINGIAKGIVYLHEDSQLRVIHKDVKASNVLLDDKINPKISDFGLARAFEIEQNQANTKRAWNVWCAGKCLEYIDQVLVKSFIANEVEKCLHTGLLCVQQEAKDRPTMSMVVLMLGSDTMTLPKPNQPAYSAGRTTLNETSTLRSFNNDVTIPNMLP 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00279 412 ProSitePatterns Protein kinases ATP-binding region signature. 202 224 IPR017441 GO:0005524
Pste1g00279 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Pste1g00279 412 Pfam Protein kinase domain 244 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00279 412 SMART serkin_6 196 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00279 412 Gene3D Transferase(Phosphotransferase) domain 1 236 311 - -
Pste1g00279 412 ProSiteProfiles Gnk2-homologous domain profile. 27 137 IPR002902 -
Pste1g00279 412 Gene3D Phosphorylase Kinase; domain 1 156 233 - -
Pste1g00279 412 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 315 394 - -
Pste1g00279 412 FunFam Os07g0541700 protein 234 319 - -
Pste1g00279 412 Pfam Salt stress response/antifungal 56 115 IPR002902 -
Pste1g00279 412 ProSiteProfiles Protein kinase domain profile. 124 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00279 412 SUPERFAMILY Protein kinase-like (PK-like) 183 389 IPR011009 -
Pste1g00279 412 Gene3D - 44 129 IPR038408 -
Pste1g00279 412 Gene3D Transferase(Phosphotransferase) domain 1 312 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00279 Pste-Chr1 974593 979211 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00279 47 385 Receptor kinase-like Gene Family AT4G23190 27.677 8.62e-49 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g00279 Pkinase 4.8e-13 CL0016