Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00274 GGAAGGAAGAGTGAGGGAGAGAGAATTAGAATGGTGAAGTTTGAGGGTTGGGAATGGATGCAGATGCAGTGCTGTGGAAACCTGTCGCCGCAGGCACACTATCCGCCGGCGAGGAGGGCGGTGGAATTAGAAAGTTCAGAGACCAAAGTGGTTTTGAGCGTTCTGGGAATGACATGCGCTGCTTGCGCCGGTTCTGTTGAGAAAGCCGTCAAACGCTTACCCGGAATTCAGCAGGCCGTTGTTGATGTCTTGAACAATAAAGCTCAGGTTCTTTACTCCCCGCAAACCGTTAACGAGGAAAGAATACGTGAGGCCATAGAAGATGCTGGATTTGAGGCGAAAGTGATTGAAGAAGAGTCCCACGACATGTCCACTCAATTATGCAGAATACACGTACGAGGAATGACTTGCACTTCTTGTTCCTCCACTATTGAATCAGTTCTCCAATCCCTTCATGGGGTGCATGACGCACGAGTGGCCTTAGCAACTGAAGAAGCACAAGTTCGCTATGACCCCAACATTCTCACCCACAACCACCTAATCAGTGTCATTGAAGAAACTGGCTTCGAACCCGTTCTAATAAGCACAGGGGAACACATAACCAACATTCAACTTAAAATAGATGGCATTAAAAACGAACAATGCCTCAATGTCATTGAACGCTCTCTACATGCACTCCCTGGTGTTGAATCCATTGACATATATCCTGATACTGACAAAATTTCTATAACTTATAAACCGTACATGACAGGACCAAGAACCTTCATAGAAGTCATAGAATCCACAGGATCAGGGTGTTTTAAAGCGACCATATTCCCAAATGACGGAGGAAGAGAAGCACAAAGACAAGACGAAATTAACCGCTACTCCAAGTTATTCATATGGAGTTTGGCTTTTACCATTCCTGTATTCATGACATCCATGGTCCTCATGTATATACCTGGAGTTAAACATGTTTTGGAGATCAAAGTTGTCAATATGCTCGACATTGGACTTCTCTTGAGGTGTGAATTTGCTACCCCGGTGCAGTTTGTCATAGGTAGAAGGTTCTATGTTGGGGCATATAGAGCATTGCGCAAAGGTTTTGCCAACATGGATGTGTTGATAGCCTTGGGGACAAATGCAGCATATTTCTACTCTCTATATGTTGTGGAAAGAGCTGCTTTCTCTCGGCATTTCAAAGGCAACGATTTCTTTGAGACCAGCTCTATGCTTATTTCCTTTATTCTTCTGGGGAAGTATTTAGAAGTGTTGGCTAAGGGGAAGACGTCTCAGGCCATTGCAAAGCTTATGGACTTGACACCCGACACCGCAACCTTGTTAACTCAAGATGATGAGGGAAATGTCGTTAGTGAAAGGCAGATTGATAGCCGGTTGATACAAAAGGACGATGTGATTAAGGTTCTTCCTGGTGCAAAAGTAGCCTCAGATGGTTTTGTCATATGGGGTCAGAGTCATGTAAATGAGAGCATGATAACTGGAGAGGCAAGGCCTGTCGCCAAGAGGAAGGGTGATATGGTGATTGGAGGCACTGTGAATGAGAATGGAGTTTTGCATGTTAAGGTGACAAGGGTTGGATCAGAAACTGCCCTCTCTCAGATTGTTCGACTCGTTGAGTCTGCCCAGATGGCTAAAGCTCCTGTCCAAAAACTTGCAGATCATATTTCTAAATATTTTGTTCCCCTGGTCATTGTGCTTTCTCTTTCAACATGGCTTTCTTGGTTCCTAGCTGGAAAGTTCCATGCTTACCCAAAATCTTGGATACCGTCCTCCATGAACAGCTTTGAGCTTGCACTTCAGTTTGGGATTTCAGTCATGGTCATTGCCTGCCCTTGTGCTCTAGGCCTAGCCACTCCTACGGCTGTTATGGTTGGTACTGGTGTTGGTGCGACACAAGGTGTGTTGATCAAAGGGGGGCAAGCATTAGAAAGTGCACACAAGGTGAATTGCATTGTGTTTGATAAGACAGGGACCCTCACAGTTGGGAAGCCTGTGGTTGTGAACAGCGAACATCCTATTGCCAAGGCCATTGTTGAGCACGCGAAAAAGATCATAGAAGAAGAGAATCATCCCTGGCCAGAAGCACGTGACTTTGTTTCTGTTTCAGGCCATGGAGTGAAGGCCATTGTTCTAAACAAGGAAATAATGGTCGGGAATAAAAAGATGATGTCGGATCATAACATAGCCATTTCAGTAGATGCCGAAGAAACACTAGCAGAAGCTGAAAGCCTGGCTCAAACTGGGATTTTAGTATCCTTGGATGGAGAAATCGCTGGAGTTTTAGCTGTATCTGATCCACTGAAACCCGGTGCCGAAGAAGTTATTTCCATTCTTAATTCCATGAAAATCAAGAGCATCATGGTGACAGGTGATAACTGGGGAACTGCCAAGTCTATAGCAAGACAAGCTGGTATTGAAACTGTCATGGCAGAGTCTCAGCCTGAAACTAAAGCGACCAAAATAAAAGAATTGCAGAACTCTGGATACACGGTGGCAATGGTGGGAGATGGCATAAACGATTCACCAGCATTAGTGGCAGCTGATGTTGGAATGGCAATTGGTGCTGGCACGGATATAGCTATTGAGGCAGCTGATATTGTTCTGATGAAGAGCAACTTGGAGGATATAATAACGGCCATTGACCTTGCAAAGAGAACTTTCACTCGTATACGTTTAAACTATATTTGGGCTTTGGGTTACAATCTGCTAGCCATCCCAATTGCTGCGGGAGTCCTTTACTCCTCCACTAGATTCCGGTTACCACCATGGATTGCTGGAGCTGCAATGGCTGCCTCTTCTCTCAGTGTTGTTTGCTCATCCCTCTTGTTAAAGAATTACAAGAGACCTAGGAAGCTAAACAAGTTGGAGATAAATGGTATAAAGATTGAATAATCAACGTCTCCACTGTAAATGTCTTGTTTGTTGGGACTTGGGATTATTGTACTTTTTGGGCATGGGGGCTGTAAGTAAACTAAGATAGATTTTATCAAAACTAGATATCCCTACTTTTCCAAATACCACAGTAGTGAATAGAGTTTTGTTTCGATCTGATGATTTTTTCTGGTTGATCATGGATTCTCGGTCGAATTGGATTTAAAAATTAAAAAATAAATTTATTATTATGAATAAATAGATTGACT 3140 0.4366 MVKFEGWEWMQMQCCGNLSPQAHYPPARRAVELESSETKVVLSVLGMTCAACAGSVEKAVKRLPGIQQAVVDVLNNKAQVLYSPQTVNEERIREAIEDAGFEAKVIEEESHDMSTQLCRIHVRGMTCTSCSSTIESVLQSLHGVHDARVALATEEAQVRYDPNILTHNHLISVIEETGFEPVLISTGEHITNIQLKIDGIKNEQCLNVIERSLHALPGVESIDIYPDTDKISITYKPYMTGPRTFIEVIESTGSGCFKATIFPNDGGREAQRQDEINRYSKLFIWSLAFTIPVFMTSMVLMYIPGVKHVLEIKVVNMLDIGLLLRCEFATPVQFVIGRRFYVGAYRALRKGFANMDVLIALGTNAAYFYSLYVVERAAFSRHFKGNDFFETSSMLISFILLGKYLEVLAKGKTSQAIAKLMDLTPDTATLLTQDDEGNVVSERQIDSRLIQKDDVIKVLPGAKVASDGFVIWGQSHVNESMITGEARPVAKRKGDMVIGGTVNENGVLHVKVTRVGSETALSQIVRLVESAQMAKAPVQKLADHISKYFVPLVIVLSLSTWLSWFLAGKFHAYPKSWIPSSMNSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVNSEHPIAKAIVEHAKKIIEEENHPWPEARDFVSVSGHGVKAIVLNKEIMVGNKKMMSDHNIAISVDAEETLAEAESLAQTGILVSLDGEIAGVLAVSDPLKPGAEEVISILNSMKIKSIMVTGDNWGTAKSIARQAGIETVMAESQPETKATKIKELQNSGYTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDIITAIDLAKRTFTRIRLNYIWALGYNLLAIPIAAGVLYSSTRFRLPPWIAGAAMAASSLSVVCSSLLLKNYKRPRKLNKLEINGIKIE 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00274 953 ProSiteProfiles Heavy-metal-associated domain profile. 191 257 IPR006121 GO:0046872
Pste1g00274 953 CDD P-type_ATPase_Cu-like 283 920 - -
Pste1g00274 953 CDD HMA 41 104 IPR006121 GO:0046872
Pste1g00274 953 NCBIfam copper ion binding protein 39 103 IPR006122 GO:0005507
Pste1g00274 953 SUPERFAMILY HAD-like 641 930 IPR036412 -
Pste1g00274 953 PRINTS Copper-transporting ATPase 1 signature 39 64 - -
Pste1g00274 953 PRINTS Copper-transporting ATPase 1 signature 65 88 - -
Pste1g00274 953 PRINTS Copper-transporting ATPase 1 signature 140 161 - -
Pste1g00274 953 PRINTS Copper-transporting ATPase 1 signature 94 114 - -
Pste1g00274 953 NCBIfam heavy metal translocating P-type ATPase 355 933 IPR027256 GO:0006812|GO:0016020|GO:0019829
Pste1g00274 953 SUPERFAMILY HMA, heavy metal-associated domain 187 256 IPR036163 GO:0046872
Pste1g00274 953 Gene3D - 647 755 IPR023299 GO:0000166
Pste1g00274 953 Pfam E1-E2 ATPase 423 620 - -
Pste1g00274 953 ProSitePatterns Heavy-metal-associated domain. 122 151 IPR017969 GO:0046872
Pste1g00274 953 PRINTS P-type cation-transporting ATPase superfamily signature 771 781 - -
Pste1g00274 953 PRINTS P-type cation-transporting ATPase superfamily signature 749 760 - -
Pste1g00274 953 PRINTS P-type cation-transporting ATPase superfamily signature 824 843 - -
Pste1g00274 953 PRINTS P-type cation-transporting ATPase superfamily signature 642 656 - -
Pste1g00274 953 PRINTS P-type cation-transporting ATPase superfamily signature 478 492 - -
Pste1g00274 953 PRINTS P-type cation-transporting ATPase superfamily signature 847 859 - -
Pste1g00274 953 FunFam Copper-transporting ATPase 1, putative 410 532 - -
Pste1g00274 953 SUPERFAMILY HMA, heavy metal-associated domain 116 188 IPR036163 GO:0046872
Pste1g00274 953 FunFam Probable copper-transporting ATPase HMA5 705 881 - -
Pste1g00274 953 NCBIfam HAD-IC family P-type ATPase 395 906 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste1g00274 953 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 16 949 - -
Pste1g00274 953 ProSiteProfiles Heavy-metal-associated domain profile. 116 182 IPR006121 GO:0046872
Pste1g00274 953 ProSitePatterns E1-E2 ATPases phosphorylation site. 644 650 IPR018303 -
Pste1g00274 953 Pfam haloacid dehalogenase-like hydrolase 638 838 - -
Pste1g00274 953 SUPERFAMILY HMA, heavy metal-associated domain 35 110 IPR036163 GO:0046872
Pste1g00274 953 Gene3D - 609 881 IPR023214 -
Pste1g00274 953 ProSiteProfiles Heavy-metal-associated domain profile. 38 104 IPR006121 GO:0046872
Pste1g00274 953 SUPERFAMILY Calcium ATPase, transduction domain A 442 528 IPR008250 -
Pste1g00274 953 Pfam Heavy-metal-associated domain 120 180 IPR006121 GO:0046872
Pste1g00274 953 Pfam Heavy-metal-associated domain 42 102 IPR006121 GO:0046872
Pste1g00274 953 Pfam Heavy-metal-associated domain 196 253 IPR006121 GO:0046872
Pste1g00274 953 CDD HMA 194 260 IPR006121 GO:0046872
Pste1g00274 953 CDD HMA 122 181 IPR006121 GO:0046872
Pste1g00274 953 ProSitePatterns Heavy-metal-associated domain. 44 73 IPR017969 GO:0046872
Pste1g00274 953 FunFam Copper-transporting ATPase HMA5 37 108 - -
Pste1g00274 953 Gene3D - 191 276 - -
Pste1g00274 953 SUPERFAMILY Calcium ATPase, transmembrane domain M 392 634 IPR023298 -
Pste1g00274 953 Gene3D - 410 532 - -
Pste1g00274 953 FunFam ATPase copper transporting beta 112 186 - -
Pste1g00274 953 Gene3D - 34 107 - -
Pste1g00274 953 Gene3D - 116 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00274 Pste-Chr1 953075 964332 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00274 30 953 Primary Pumps ATPases AT1G63440 71.714 0.0 1396