Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00271 CTGAGTAAAAAATTCCATGTTGGGAGCACTACTAAACCTGAGATCAACATGCTTTGCTTTCTTGTTCTTGCTGAGTTTCAGACCATTGATTATGAAGGCACAAACACCCATTTATGTGGGAAGTAACTGCCAAAATAACCCCCAACAACATCTCAGTAGTGAATACAAAACCAATATTAAGAAAATGCTCAAATGGGCATCCTCAGATTCAGCCTCAAGCAAAGGTTACAACAGCACCCGCATAGGCAACGAAAGTCTTGTGTATGGCTACTATGATTGCCGTGGTGATGTGGTGGGATACTTTTGCCAATTTTGTGTTTCTAATGCTGCTAGAGAAGTACCTCGGCGCTGCCCCAATAGGGTGTCTGCAATGGTTTGGTATGATTACTGCATTCTAAAGTACTCAAATGAGAGGTTCTTTGGGACTGTTTTAACAAACCAATCATGGCATGCTCTTGGAACAAAAAACATATCCAACAAAGCAGAGATTCAGAAAGATGAGGACTTTGTGAGAAGTTTGATCACAAAGGCAACTAAAGAAACCAACCAGTTGTACTATATGGATTACTTCAACTTGAGTTTCACTCAGAGAAGGTTTGGCATGGTGCAGTGTAGTAGAGATCTCACTAATGAAGGGTGCAGACAGTGTTTGGAGGCCATGTTAACACAAGTTCCCATATGTTGCGGGCAAAAAATAGGATGGCTTATTTTGTCTGGAACTTGTATGATAAGGTATGATCATCAAATGTTCTACCTTCTTAACAACCAAACATCTTCCCTTCCTGTGCCAAATATGCAAACAGCAAAATTTGGGGGTAACAAGAGGTCAAAAATCTTGATCATTAGCGTCGGTGTGATGGGGTCAATAATTCTCATATGTTTCAGTGTATATTGCTTCTGGTACAGCAGAAGAGTTAGAAAAGATTGGTTACATCTATCTTCTTTTCATAAAATTCAAACTGAGGCAACATGGACAAAAGACTTGCCTATAATCCCATTAACCACAATTCTACAGAGTACTGATAACTTTTCAGAAGCATTTAAATTAGGGGAAGGAGGATTTGGCTCTGTTTACAAGGGAATTCTACCAGATGGAAGCCAAATTGCAGTTAAAAGGCTTTCAGAATTTTCCTTTCAAGGCTCTCAGGAGTTTAATAATGAAGTAATATTTATAGCTAATTTGCAACATCGCAACCTTGTAAAAATTTTGGGATGTTGCTTGGATGAAAATGAAAAGATACTTGTATACGAGTATTTGGCAAATAAAAGTCTCGACATTCACCTGTTTGATGATGAGAAAAGAAAACAATTAGATTGGAAACTGAGATTAAGGATTATAAATGGAATAGCAAGAGGTATTCTATACCTTCATGAGGACTCAAGAGTCACAGTTATTCATAGAGATCTCAAAGCAAGCAATGTTCTATTAAACCAAGATATGAATCCTAAAATATCAGATTTTGGGTTAGCAAGGGCATTTGAAATAGGACAGAGTCAAGAAAAAACAAAACGAGTAATGGGCACTTTTGGATACATGGCTCCAGAGTATGCTATGCAAGGATTATTTTCGGTGAAGTCTGATGTTTTCAGTTTTGGAGTTCTTGTTCTAGAAATCATTAGTGGGAAAAAGAATAGTGGATTATACATGTCACAGCATGGTCAAACTCTTCTTTTATATGCTTGGAGAATATGGTGTGCAGGAAAATGTTTGGAATTGATGGATCCAATACTCGTAAAATCCTTCATAGGCAGTGAAGTTGAAAGGTGCATACACATTGGCTTGCTGTGTGTTCAAGAAGATGCAAAAGATAGACCAACCATGTCTGATGTTGTTGTAATGTTGGTAAGTGAGACAATGGCCCTTCCAAAACCCAAGCACCCAGCATTTTCAACTGGAATAATGGACTCAGACGAAGTACCAACATCAAAACGTTCAAAGAATCTTTCAAATAATGATGTAACAGTCTCTATTTCATTACCAAGATAGTGGATAATTACATAAAGGATTAATCTCTCCTCATCTGTGACAAGTAAAGTTCTATTTATGCTTGATTTAAATTAAAAGTAAAACTACTATTAAATCTACACTTATCGCAATACATAAATCTACACTGAATTAATCAG 2124 0.3715 MLGALLNLRSTCFAFLFLLSFRPLIMKAQTPIYVGSNCQNNPQQHLSSEYKTNIKKMLKWASSDSASSKGYNSTRIGNESLVYGYYDCRGDVVGYFCQFCVSNAAREVPRRCPNRVSAMVWYDYCILKYSNERFFGTVLTNQSWHALGTKNISNKAEIQKDEDFVRSLITKATKETNQLYYMDYFNLSFTQRRFGMVQCSRDLTNEGCRQCLEAMLTQVPICCGQKIGWLILSGTCMIRYDHQMFYLLNNQTSSLPVPNMQTAKFGGNKRSKILIISVGVMGSIILICFSVYCFWYSRRVRKDWLHLSSFHKIQTEATWTKDLPIIPLTTILQSTDNFSEAFKLGEGGFGSVYKGILPDGSQIAVKRLSEFSFQGSQEFNNEVIFIANLQHRNLVKILGCCLDENEKILVYEYLANKSLDIHLFDDEKRKQLDWKLRLRIINGIARGILYLHEDSRVTVIHRDLKASNVLLNQDMNPKISDFGLARAFEIGQSQEKTKRVMGTFGYMAPEYAMQGLFSVKSDVFSFGVLVLEIISGKKNSGLYMSQHGQTLLLYAWRIWCAGKCLELMDPILVKSFIGSEVERCIHIGLLCVQEDAKDRPTMSDVVVMLVSETMALPKPKHPAFSTGIMDSDEVPTSKRSKNLSNNDVTVSISLPR 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00271 656 FunFam Cysteine-rich receptor-like protein kinase 10 301 413 - -
Pste1g00271 656 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Pste1g00271 656 Pfam Domain of unknown function (DUF3403) 611 656 IPR021820 GO:0004674
Pste1g00271 656 ProSiteProfiles Protein kinase domain profile. 338 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00271 656 Gene3D Transferase(Phosphotransferase) domain 1 414 618 - -
Pste1g00271 656 ProSiteProfiles Gnk2-homologous domain profile. 32 134 IPR002902 -
Pste1g00271 656 Gene3D Phosphorylase Kinase; domain 1 300 413 - -
Pste1g00271 656 MobiDBLite consensus disorder prediction 630 656 - -
Pste1g00271 656 FunFam cysteine-rich receptor-like protein kinase 10 414 616 - -
Pste1g00271 656 CDD STKc_IRAK 344 609 - -
Pste1g00271 656 Pfam Salt stress response/antifungal 38 131 IPR002902 -
Pste1g00271 656 Pfam Salt stress response/antifungal 163 242 IPR002902 -
Pste1g00271 656 Gene3D - 140 245 IPR038408 -
Pste1g00271 656 Gene3D - 32 134 IPR038408 -
Pste1g00271 656 MobiDBLite consensus disorder prediction 627 656 - -
Pste1g00271 656 Pfam Protein tyrosine and serine/threonine kinase 343 606 IPR001245 GO:0004672|GO:0006468
Pste1g00271 656 ProSiteProfiles Gnk2-homologous domain profile. 140 245 IPR002902 -
Pste1g00271 656 SUPERFAMILY Protein kinase-like (PK-like) 312 609 IPR011009 -
Pste1g00271 656 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 45 652 - -
Pste1g00271 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Pste1g00271 656 SMART serkin_6 338 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00271 Pste-Chr1 942820 945683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00271 10 656 Receptor kinase-like Gene Family AT4G05200 41.740 6.29e-172 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g00271 PK_Tyr_Ser-Thr 4.5e-46 CL0016