Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00265 ATGAAAATGATGGGAAAGACATTGTTAACATTGTTGTTTCTGTCCTCAGTTTTCTCAATAGCCTCGTCAAGAAGAAGACATTCGAATTCAAACATAGAATGGTGGTGCAAGCAAACCCCGTATCCGGAGCCATGCAAATACTACATGAAATTACAACATAGGCAGCACCGTGAGAAAGTGAAACACAAATCAGAATTCCGCGCGGTTCTAGTTGAGTTGGCGTTGGAGAGAGCAGTGGTGATGCGAAGTGAATTGGAGCAAAAGCAAAAGGGGATGAGCAAGAAGCAGAAATCAGTGTTGCGTGATTGTTTGAAGCTGTGCGACAACACGGTTTTCCATCTAAACCGTACCCTTGAGGGGATTAACGTGAAGAGAAGGTGTTCGGGTTTTGATGCACAAACGTGGCTCAGCACAGCTCGGACAAACATTGAAACATGCAAAAATGGAGCTTTAGAACTGGGTGTAGGAGATTGGATGGTTCCGAGGGAGAGAAGCAACGTAACAGAGATGATAAGCAACGGGTTATTCGTGAATTGGGGTTTGGTGGGTGAAGGTGAAGATGGTGCAGGTGCAGGTGCAGGTGCAGGTGCATATCCAAGATGGGTTTGGGTGCATGAGAGGAAGCTGTTGCAGTCTTCTAGTGCTAGGATAAAGGGAAAGGCAAATATAGTGGTGGCAAAAGATGGTTCGGGGCAATTCAAGAGTGTACAAGCAGCAATAAATGCTGCGGGAAGGAGAAGGTTGAAGAGCAGGTTTATAATTCATGTAAAGAGAGGCGTTTATAGAGAGAACATAGAGGTTGACAAGAGAAACGATAACATTATGTTGGTGGGTGATGGGATGAGAAACACCATAATAACAAGTGGGAGGAGCGTGAGTGATGGTTATACCACTTATAGCTCGGCAACAGCAGGAATTGATGGTCTTCACTTCATAGCACGTGACATTACGTTCAGAAACACTGCTGGTCCTCTAAAGGGTCAAGCAGTGGCACTTCGATCCGCCTCTGACCTATCGGTCTTCTATCGTTGTGGCATCCAAGGATACCAAGACACTCTAATGGTTCATGCACAAAGACAGTTTTACAGAGCATGCTACATCTATGGCACCGTTGACTTCATATTTGGCAATGCTGCTGTTGTTTTCCAAAACTCTCTCATTCTTGTTAGAAGGCCATTAAATGGGCAAGCAAACATGATCACTGCCCAAGGTCGAGATGACCCTTTTCAAAACACTGGCTTTACAATTCACAATTCTCAGATCAGGGCTGCCCCAGACCTCAGGCCCGTTATCAGCTCATTCAACACCTTCTTGGGCCGCCCATGGCAACGATACTCCCGTGTTGTCGTCATCAAATCCTTCCTCGATTCCTTGGTCAATCCAATGGGTTGGTCTCCTTGGGGTGATTCTACTTTTGCTTTCAATACTCTTTATTACGGAGAGTACAGAAACTTTGGGCCTGGCTCATCCACAACACACAGGGTTTCATGGCCTGGTTTTCATCCCATAACAAGCCCACTTCAGGCTTCGCCATTCACAGTTGCTAACCTCCTTGCTGGCCGCACATGGTTGCCTGCCACCGGTGTCCCGTTCACTTCTGGCCTTTAA 1608 0.4633 MKMMGKTLLTLLFLSSVFSIASSRRRHSNSNIEWWCKQTPYPEPCKYYMKLQHRQHREKVKHKSEFRAVLVELALERAVVMRSELEQKQKGMSKKQKSVLRDCLKLCDNTVFHLNRTLEGINVKRRCSGFDAQTWLSTARTNIETCKNGALELGVGDWMVPRERSNVTEMISNGLFVNWGLVGEGEDGAGAGAGAGAYPRWVWVHERKLLQSSSARIKGKANIVVAKDGSGQFKSVQAAINAAGRRRLKSRFIIHVKRGVYRENIEVDKRNDNIMLVGDGMRNTIITSGRSVSDGYTTYSSATAGIDGLHFIARDITFRNTAGPLKGQAVALRSASDLSVFYRCGIQGYQDTLMVHAQRQFYRACYIYGTVDFIFGNAAVVFQNSLILVRRPLNGQANMITAQGRDDPFQNTGFTIHNSQIRAAPDLRPVISSFNTFLGRPWQRYSRVVVIKSFLDSLVNPMGWSPWGDSTFAFNTLYYGEYRNFGPGSSTTHRVSWPGFHPITSPLQASPFTVANLLAGRTWLPATGVPFTSGL 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00265 535 Pfam Pectinesterase 222 520 IPR000070 GO:0030599|GO:0042545
Pste1g00265 535 CDD PMEI-like_3 34 178 - -
Pste1g00265 535 PANTHER PECTINESTERASE 17 525 - -
Pste1g00265 535 Pfam Plant invertase/pectin methylesterase inhibitor 31 175 IPR006501 GO:0004857
Pste1g00265 535 Gene3D - 217 535 IPR012334 -
Pste1g00265 535 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 177 IPR035513 -
Pste1g00265 535 SUPERFAMILY Pectin lyase-like 220 534 IPR011050 -
Pste1g00265 535 SMART PMEI_2 27 177 IPR006501 GO:0004857
Pste1g00265 535 NCBIfam pectinesterase inhibitor domain 8 178 IPR006501 GO:0004857
Pste1g00265 535 ProSitePatterns Pectinesterase signature 2. 367 376 IPR033131 -
Pste1g00265 535 FunFam Pectinesterase 216 535 - -
Pste1g00265 535 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 181 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00265 Pste-Chr1 931349 932956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00265 28 535 Carbohydrate Esterase AT5G51500 58.949 0.0 608