Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00263 ATGATCACTATGAAGATTAATCTCAGCTTCATGCTCCTGCTTCTAACCACAACAAATGCCCAACCACCAATTTACAATAAAAATTTTTGTGAGAACTCAACTCATATTAGCCCTTCATACAAAACCAATGTTAAAACCCTCATCTCTTGGGTAACCAGTGACTCATTCACAAGCAAAGGATTTAACTACACCATAATTGACGACCATGACGACAACAACAACGATATCGGTTTTAGTGATGTTGTTTATGGTTTGTACAGCTGCAGATACGACATCACAGGATATTTGTGTCAGTTCTGTCTTACAACTGCTGCCAGCGACATCTCTCGGCAGTGTCCTAACAGTGTAACCACTATTATATGGTATGATGTATGCATCCTTCGTTACTCAAACCAAAGTTTCCATGGCAAAGTTAGTTTAAGCCCAACATGGAACATTACAGGACCCAGAAAAATCAAGGACTCAACTGAAGCTGAGAAAATGGAGACTGCTATGAAAGGTTTGATTAGAAAAGCAACCATAGAGACAAAGCAGTTTTGGGCAGTGGAGGAGTTCCATTGGGCTGAAAATGAGACATTGTATGGATGGGTGCAGTGTGATAGGGACCTTCCAAGTGATGATTGTGGGCAGTGTTTGTATGCTTTGTTAGACTTATTTCCACAATGTTGTGCCACAAACTTACAATGGGCAATTTTTGCTCCAAGCTGTGGTATCAGGCTAGATGATGAGAAGTTCTACCAGAGTTCAGGCAAAGGAGGAACTGGAAAAGAGTCAGAAAAGAAACATGTTTTTGTAGATGAGATAACGCTCGATGAGGAAACATGGAATGGAGACTTGCCAACAATCCCGTTAATCACAATTCTACAAAGTACTAATAACTTTTCAGAAACTTCTAAATTAGGGGAAGGTGGATTTGGCCTTGTTTTCAAGGGAATGCTACCAAATGGAAGACAAATTGCAGTAAAAAAGCTCTCAAAATTCTCTGGTCAAGGTTCAGAAGAGTTCAAAAATGAAATAATGTTTATAGCTAAATTACAACATCGCAACCTTGTAAGACTTTTGGCATATTGCTTGGAGGAAAATGAGAAGATACTTGTATATGAGTATATGTCTAATGGAAGCCTCCACTCTCACTTGTTTGATGATGAGAAAAAAACGCAGCTTGATTGGAACATAAGATTAAGCATTATCAATGGAATAGCGAAAGGTATTGTCTACCTACATGAGGACTCTCGACTCAGAGTAATTCACAGGGATCTCAAGGCTAGCAACGTCTTATTAGATGATGAAATGAACCCTAAAATCTCAGATTTTGGATTAGCAAGAGCATTCGAAATAGGACAAAATCAAGCAAATACAAAACGAGTAATGGGAACATTTGGATACATGGCTCCGGAGTATGCTATGGAAGGATTATTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTGTTCTAGAAATCATTATTGGCAGAAAGAACAGTGGATTTCATTTGTCAGACCATGGTCAAAGTCTTCTTTTATATGCCTGGAAAGTATGGTGTGCAGGAAAATGTTTAGAATTGATTGATCAAGTGTTGGTGAAATCCTTCATAGCTAGTGAAGTTGAGAAGTGCTTACACATTGGTTTGTTGTGTGTTCAACAAGAAGCAGAAGATAGACCAACTATGTCCAGTGTTGTTCTAATGCTGGGAAGTGATACAATGACTCTTCCAAAACCTAATCAACCAGCATATTCAGTTGGCAGAACAACCTTAAATGAAACATCAACTTCAAGAAGTTCCAACAATAATGTAACAATCTCTAACATGTTGCCAAGGTAA 1827 0.3837 MITMKINLSFMLLLLTTTNAQPPIYNKNFCENSTHISPSYKTNVKTLISWVTSDSFTSKGFNYTIIDDHDDNNNDIGFSDVVYGLYSCRYDITGYLCQFCLTTAASDISRQCPNSVTTIIWYDVCILRYSNQSFHGKVSLSPTWNITGPRKIKDSTEAEKMETAMKGLIRKATIETKQFWAVEEFHWAENETLYGWVQCDRDLPSDDCGQCLYALLDLFPQCCATNLQWAIFAPSCGIRLDDEKFYQSSGKGGTGKESEKKHVFVDEITLDEETWNGDLPTIPLITILQSTNNFSETSKLGEGGFGLVFKGMLPNGRQIAVKKLSKFSGQGSEEFKNEIMFIAKLQHRNLVRLLAYCLEENEKILVYEYMSNGSLHSHLFDDEKKTQLDWNIRLSIINGIAKGIVYLHEDSRLRVIHRDLKASNVLLDDEMNPKISDFGLARAFEIGQNQANTKRVMGTFGYMAPEYAMEGLFSVKSDVFSFGVLVLEIIIGRKNSGFHLSDHGQSLLLYAWKVWCAGKCLELIDQVLVKSFIASEVEKCLHIGLLCVQQEAEDRPTMSSVVLMLGSDTMTLPKPNQPAYSVGRTTLNETSTSRSSNNNVTISNMLPR 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00263 608 Gene3D - 24 134 IPR038408 -
Pste1g00263 608 Gene3D - 146 245 IPR038408 -
Pste1g00263 608 Gene3D Transferase(Phosphotransferase) domain 1 370 575 - -
Pste1g00263 608 ProSitePatterns Protein kinases ATP-binding region signature. 300 323 IPR017441 GO:0005524
Pste1g00263 608 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 255 603 - -
Pste1g00263 608 ProSiteProfiles Protein kinase domain profile. 294 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00263 608 Pfam Protein tyrosine and serine/threonine kinase 297 563 IPR001245 GO:0004672|GO:0006468
Pste1g00263 608 CDD STKc_IRAK 300 565 - -
Pste1g00263 608 FunFam Uncharacterized protein 370 571 - -
Pste1g00263 608 FunFam Cysteine-rich receptor-like protein kinase 10 255 369 - -
Pste1g00263 608 Gene3D Phosphorylase Kinase; domain 1 255 369 - -
Pste1g00263 608 ProSiteProfiles Gnk2-homologous domain profile. 21 134 IPR002902 -
Pste1g00263 608 Pfam Salt stress response/antifungal 36 132 IPR002902 -
Pste1g00263 608 Pfam Salt stress response/antifungal 159 241 IPR002902 -
Pste1g00263 608 SMART serkin_6 294 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00263 608 Pfam Domain of unknown function (DUF3403) 567 608 IPR021820 GO:0004674
Pste1g00263 608 SUPERFAMILY Protein kinase-like (PK-like) 278 565 IPR011009 -
Pste1g00263 608 MobiDBLite consensus disorder prediction 577 608 - -
Pste1g00263 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Pste1g00263 608 ProSiteProfiles Gnk2-homologous domain profile. 140 245 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00263 Pste-Chr1 928895 933704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00263 10 580 Receptor kinase-like Gene Family AT4G05200 40.095 1.54e-159 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g00263 PK_Tyr_Ser-Thr 7.7e-49 CL0016