Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00251 CGGCAGAGGAAGCTATTTAATAACAGAGGAAGCGAAACCAAAGCACTGTACTTAAAGACAAGACTCCACTCCATCTTCCTCACTTAAGTGCACTGCGCCTCGTCAACGAAGGTAAACTAAGCTGCGAGCTCTCTCTGCTATTCGGTATTGCTTCGTGCTTAGTTAGTTAGGTAGTTAGTTAGTTAGTTATATCTGAAGTGCTCCCATTGATGAATTGGCGGTGGTGATAGATGGGGAAGGGAAAACCTAGGGCTGTTGAAAAAGGTGTGGTAGGACCTAGTTTGAGTGTTACATCCTCGACTATACCTACGGGGCCTGTGTATTATCCCACTGAAGATGAATTCAAGGATCCTTTGGAGTATATCTACAAGATTAGACCCGAGGCTGAGCCTTATGGAATTTGTAAGATTGTGCCTCCCAAGAGTTGGAAACCCCCTTTTGCTTTGGATCTCAACACCTTCACTTTCCCTACCAAGACTCAGGCCATTCACAAGCTCCAGGCACGCCCTCCTGCCTGTGACTCCAAGACCTTTGACTTGGACTACTCTAGGTTTTTGCAGGATCACTCTAGTAAGAAGTCCAGGAAGAGGGTTGTGTTCGAGGGCCAGGAGCTCGACTTGTGTAAGCTATTCAACGCTGTCAAGCGCTTTGGTGGTTATGATAAGGTTGTTGATGGGAAGAAATGGGTGGATGTTGCTCGGTTTGTGAGGTCTTGTGGGAAGATCTCCGATTGCGCTAAGCATGTTCTCTGTCAGTTGTATCGCGAGCATTTGTATGATTATGAAAATTTCTACAATCAGATGAGTCAAGGTGCTCTTCAGACTTGTAAGAAAAGTGTGCATGAGGACCACGGGACTGCTCATGGGGTGCAGCCTCTTGTACCCAAGAGGAATCCCAAGATTGTAGATTGTTCGAAACGTAAGGATAGTATAGTGCAAGAAGAAGAGCATGATCAGATTTGTGAGCAATGTAAAAGTGGTTTGCATGGGGAACTCATGCTTTTGTGTGACAGGTGTGATAAGGGTTGGCATACTTATTGTCTTTCCCCGCCATTGAAACAAATTCCTCTGGGAAATTGGTATTGTTTCAACTGCTTGAATTCTGACAGGGACAGCTTTGGTTTTGTGCCTGGGAAGCATTATTCATTGGAAGCTTTTAGACGCATAGCAGATCGATCAAGGAAGAGATGGTTTGGATCAGGACCTGTTTCGAGGGTACAAATAGAGAAAAAGTTTTGGGATATTGTGGAGGGATTGGTTGGAGAGGTTGAGGTTATGTATGGAAATGACTTGGATACATCTATATATGGGAGTGGTTTCCCACGTGTAACTGATCAGAAACCACAATCCATTGATGACAAATTATGGGAAGAATACTCAACTAACCCATGGAATCTTAATAACTTACCTAAGTTGAAAGGCTCAATGCTTCGAGCTGTTCATCACAATATCACTGGTGTCATGGTACCCTGGTTATATATTGGGATGCTTTTCTCATCCTTTTGCTGGCATTTCGAGGACCACTGCTTTTACTCAATGAATTATCTACACTGGGGAGAGCCAAAGTGCTGGTACAGTGTGCCTGGTAGTCAAGCCAGTGCTTTCGAGAAGGTGATGAGAAGCAGTCTTCCTGATCTTTTTGATGCACAACCTGATCTGCTTTTTCAGCTTGTTACAATGCTAAACCCATCTGTCTTGCAAGAAAATGGAGTTCCTGTCTACAACATACTTCAGGAGCCTGGGAATTTTGTTATTACCTTCCCCAGATCGTATCATGGAGGTTTCAATCTTGGTTTAAATTGTGCTGAGGCAGTCAATTTTGCTCCTGCTGACTGGCTACCATATGGTGCTTTTGGAACTGATCTCTATCAGCGGTATCACAAAACTGCTGTGTTGTCTCATGAGGAGCTTCTTTGTGTAGTAGCCCAGTATGGTGATGTTGACAGCAGAGTGTCTTCTTATTTGAAGAGGGAATTGTTGAGAATATCAGATAAAGAAAAAATTTGGAGAGAGAAACTTTGGAAAAATGGTATTGTTAAATCTTCTCGCATGGCTCCTCGAAAATGTCCTCAATATGTGGGAACTGAAGAAGATCCAGCATGCATTATATGCCAGCAATATCTCTATCTCTCTGCTGTTGTATGTGGTTGTAGGCCATCAACTTTTGTTTGTCTGGAGCACTGGGAACACCTTTGTGAATGCAAAACTGTAAAACTACGTCTTCTCTATCGTCACTCACTTGCAGAATTGTATGATTTGACATTTTCTATGGACAAATATACTTCCGAGGACAAAGCTGAGTGTAGAAGTGTGAAAAGGCAGCCTTCATGTCTCAGTGCTTTGACCAAAAAGGTGAAAGGTGGCTCCATTACTTTTTCACAACTTGCTACAGAGTGGCTTCGGCAATCTAGTACTATTCTTCAGAATGTTTTTTTGCATGATGCGTATGTTATTTCACTTAGGAAATCTGAACAATTTCTTTGGGCTGGTTCTGAGATGGACTCTGTTCGAGAGATGGTAAAGAATTTGAATGAAGCTCAGAAATGGGCTGAAGGAATAAGAGACTGCATAACAAAAATTGAGTTATGGTTGTGTCATCGGGAACCCAGTGTCAAGAAAGTTCATTTAGAAATCGTTGACGAGTTACTGAAATTTAGTCCTGCACCATGCAATGAGCCTAGTTGTCATAAATTGAAGGACTATGCAGAAGAAGCGAGGTTGTTAATTCAGGATATTGATACTGCTCTGTCAATGTGTTCAAATGTACTTTCTCCTAAGCTCATCTCTTTTCTTCACAACTTTATATTGATAATGTCTGAGTTAGAGCTTTTATACTCCAGAATTTGTGGCTTTCCCATCTATGTTGAAGAAAGCAAGAAATTAGAAGGGAAAATTTCTTCAACCAAGGCATGGCTGGATAGCATCAGAAATTGCATCTCTGCAAGACAGCCTGCTGCACTACACATTGATGATCTTTACAAGCTAAAAGCAGAGTTTGTGGATCTTCAAGTTCAACTCCCAGAGATAGATGTGCTTCAAAATCTATTAAGTCAAGCTGAATGTTGTAGTGCTCAATGTCATGATATGCTAAAAGGTCCTATGAATCTCAAGAATGTTGGTTTGCTGCTTAAGGAATGGGACAATTTTGCAGTTGATGTACCAGAGATCAAGCTTCTAAGGCAATACCATTCAGATGCTGCTTCATGGGTTTCCCACTTTAATGATGTTTTAGGGAGAGTTCAGATGCAGGAAGATCAACATAATGCAGTTAATGAATTGAATAGCATTTTAAAAGAAGGTTTATCCTTGAAAATTCAAGTTGATGAGTTGCCATTAGTTGAGATTGAGCTGAAGAAGGCTAATTGCCGGGAAAAGGCTATGAAGGCACGTGATTTGAAGATGCCTCTGGAATACATTCAGCAACTGTTGAAGGAGGCCACTATCCTTCAAATTGAGCAAGAGAAACTATTTGTCAATTTATCTTGTGTGCTAGCTGTTGCCATTCCTTGGGAGGAAAGGGCTAAAGAGATGCTTTCACATGAGGCTCCTATTTCTAACTTTGAGGACATGATCAGAGCTTCAGAAAACATATTTGTTATTCTTCCTTCTGTTAGTGATGTCAAGGATGCATTATCAGAAGCAAATTCCTGGTTAAGAAATTCAAAGTTATATTTAGTATCTTCTATTTGTGATACAAATTCTGTGCGGAAAGTTGAAGACTTGCAGATGCTGGTTTCTCAATCTAAGCATCTTAAAGTATCTTTGGAAGAAAGAGGGATGCTTGAATTAGTTCTGAAGAACTGCAGAATATGGGAGTATAAAGCTTGTTCTGTATTAAATGAAGCTCAGTGCTTATTTGAACTGGATAACTCTCTGCATGAAATAAACAGTGGTTTAATGTGTAAAGTGGAAGATTTAATTGCAAGAACCCAAGCTGCCATAGCATCTGGTGTATCACTTGGTTTTGACTTCAATGAGATTTCAAAACTCCAAGCATCTTGTTCTACACTGCAATGGTGCAAAAAAGCCTTTTCTTTCTGCAATTGCTCTCCTTCTTTAGAGGATGTTTTGGAGGTTGCTGAAGGTCTTTCCCATTCCTCTGTTTCTGGTGCTCTGTTGAAAGTATTGACTGGTGGGGTTGAATGGCTTAGGAGAGCATTAGAGGGGATTTCTGGACCTCGAAATTTTAGAAGATGCAAGCTGACTTACATGCAAGATATTCTTTCCGATTATCAGACTATTAATATGATATTTACAGCAGTGAAGTGTCAACTTGAAGATGCCATTGGAAAACATAAGTTGTGGCAAGAGCAAGTGCATAAGTTTTTTGGTCTAAGTTCAAGAGAACGATCTTGGTCTTCAATATTGCAGCTTAAGGAACATGGAGATACCATTGCCTTTGGTTGCTCTGAACTGGATTTGATTTTATCTGAAGTTGAGAAGGTGGAAAATTGGAAGAGAAGATGCATGGATAAACTAGGAACTGTAGTCCAAAATGGACATTCGCTACTTCATGCACTGGAGAAGATAAAACAGACTCTTGATAGATCATTGTTGATATACAACAAATTGCAAGATCTGAAGGAACAAAATCAACGTATCTGCTGCTTTGGTGATTCTGAAGATCAGGAATTTCTTACTTGCTCCACTTGCAAGGACTGCTATCATGTGGGGTGCATTGGACTAGCAGAAAAAGACGCAGGCATTGAAAACTACAAGTGTCCTTACTGTGAAATTTTGAGTTGTGAATTCCATTATCAGAATGGAGGTGCCCTCCTGAGGTTTGGGAAGAAGCATGTTGAATTCAAAGTTCTTACTGAACTCATGTCTGATGCTGAACATTTCTGTTTATGGATTGATGAAAGAGACATTTTGAGTCAACTTGTTGAGAAAGCCCTTTCATGCAAATCTTGCTTGAATGAAATTGTGATCCTTGCATCGGATAATGTTGATGAAGATAGTAGCGTTGTCTATGAAAAATTGGCCACTGCTGTAAAGGCATGTTATTTTATCAGTTTATCTTTTGCTAGCAAAGTGGCTATTGTTTATGATCAGCGTGATACTTGTGACCTTGAGCTGGCTTTAGCAAAAAACTTTTGGAAATTTGAAGTCAAAAGATTGTTAAATGGTGTACCTAAGCCCACTATCCATCAAATTCAGAAGCATCTGAAGGAGGGATTGGCTATGGACATATCACCTGAAGATTACTATATGCTGAAACTTACGAATGTGAATTGCTTGGGTTTGCAATGGACAGAACTAGCTAAAAAGGTGGCAACTGATTGCGGGGAACTCAGCCTGGATAAGGTCTTCCAACTCGTAGTGGAAGGTGAAAACTTGCCTGTTGATGTGAACGAGGAACTAAGGATGTTAAGAGCACGATGCATGCTTTATTGCATTTGCCGAAAGCCCTTTGATCCTCAAAGGATGATTGCATGTTGTCATTGTAATGAATGGTATCACTTTGATTGCATGAAATTGCCATGCACAAGAGAGGCCTACATTTGTCCCGCATGTAACCCATGTGAAGAAGGATTGCCTTCAAACCATGATAGATTAACTGGTGGTAAATTCGAGGAGCCTAAAACCCCATCTCCCAGGCATTCAAACCCTAGAAAGAAGCAGAGGAGAGACCTGGCCAGTCTCACTTGCAACATGTTCGCAACTAGGAATCAAGATAATGAGTTTAGGTATTCGAGTGGGATAGAATGTCTAAGGTGGCAAAATCGAAAGCCTTTCAGAAGAGCAGCTAAGAAACGTGTTGAACTTCGAAGTCTTTCTCCATTTCTGTGCATACAACGATAACAATACATAGTAGACAGCCATTGGTCATTAAATTGATTCAATTGATTTTTATGGTATGATCTCAGTCATTTTTAATCC 5882 0.4063 MGKGKPRAVEKGVVGPSLSVTSSTIPTGPVYYPTEDEFKDPLEYIYKIRPEAEPYGICKIVPPKSWKPPFALDLNTFTFPTKTQAIHKLQARPPACDSKTFDLDYSRFLQDHSSKKSRKRVVFEGQELDLCKLFNAVKRFGGYDKVVDGKKWVDVARFVRSCGKISDCAKHVLCQLYREHLYDYENFYNQMSQGALQTCKKSVHEDHGTAHGVQPLVPKRNPKIVDCSKRKDSIVQEEEHDQICEQCKSGLHGELMLLCDRCDKGWHTYCLSPPLKQIPLGNWYCFNCLNSDRDSFGFVPGKHYSLEAFRRIADRSRKRWFGSGPVSRVQIEKKFWDIVEGLVGEVEVMYGNDLDTSIYGSGFPRVTDQKPQSIDDKLWEEYSTNPWNLNNLPKLKGSMLRAVHHNITGVMVPWLYIGMLFSSFCWHFEDHCFYSMNYLHWGEPKCWYSVPGSQASAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLQENGVPVYNILQEPGNFVITFPRSYHGGFNLGLNCAEAVNFAPADWLPYGAFGTDLYQRYHKTAVLSHEELLCVVAQYGDVDSRVSSYLKRELLRISDKEKIWREKLWKNGIVKSSRMAPRKCPQYVGTEEDPACIICQQYLYLSAVVCGCRPSTFVCLEHWEHLCECKTVKLRLLYRHSLAELYDLTFSMDKYTSEDKAECRSVKRQPSCLSALTKKVKGGSITFSQLATEWLRQSSTILQNVFLHDAYVISLRKSEQFLWAGSEMDSVREMVKNLNEAQKWAEGIRDCITKIELWLCHREPSVKKVHLEIVDELLKFSPAPCNEPSCHKLKDYAEEARLLIQDIDTALSMCSNVLSPKLISFLHNFILIMSELELLYSRICGFPIYVEESKKLEGKISSTKAWLDSIRNCISARQPAALHIDDLYKLKAEFVDLQVQLPEIDVLQNLLSQAECCSAQCHDMLKGPMNLKNVGLLLKEWDNFAVDVPEIKLLRQYHSDAASWVSHFNDVLGRVQMQEDQHNAVNELNSILKEGLSLKIQVDELPLVEIELKKANCREKAMKARDLKMPLEYIQQLLKEATILQIEQEKLFVNLSCVLAVAIPWEERAKEMLSHEAPISNFEDMIRASENIFVILPSVSDVKDALSEANSWLRNSKLYLVSSICDTNSVRKVEDLQMLVSQSKHLKVSLEERGMLELVLKNCRIWEYKACSVLNEAQCLFELDNSLHEINSGLMCKVEDLIARTQAAIASGVSLGFDFNEISKLQASCSTLQWCKKAFSFCNCSPSLEDVLEVAEGLSHSSVSGALLKVLTGGVEWLRRALEGISGPRNFRRCKLTYMQDILSDYQTINMIFTAVKCQLEDAIGKHKLWQEQVHKFFGLSSRERSWSSILQLKEHGDTIAFGCSELDLILSEVEKVENWKRRCMDKLGTVVQNGHSLLHALEKIKQTLDRSLLIYNKLQDLKEQNQRICCFGDSEDQEFLTCSTCKDCYHVGCIGLAEKDAGIENYKCPYCEILSCEFHYQNGGALLRFGKKHVEFKVLTELMSDAEHFCLWIDERDILSQLVEKALSCKSCLNEIVILASDNVDEDSSVVYEKLATAVKACYFISLSFASKVAIVYDQRDTCDLELALAKNFWKFEVKRLLNGVPKPTIHQIQKHLKEGLAMDISPEDYYMLKLTNVNCLGLQWTELAKKVATDCGELSLDKVFQLVVEGENLPVDVNEELRMLRARCMLYCICRKPFDPQRMIACCHCNEWYHFDCMKLPCTREAYICPACNPCEEGLPSNHDRLTGGKFEEPKTPSPRHSNPRKKQRRDLASLTCNMFATRNQDNEFRYSSGIECLRWQNRKPFRRAAKKRVELRSLSPFLCIQR 1857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00251 1857 SMART ARID_2 92 185 - -
Pste1g00251 1857 SMART cupin_9 381 547 IPR003347 -
Pste1g00251 1857 ProSitePatterns Zinc finger PHD-type signature. 244 288 IPR019786 -
Pste1g00251 1857 MobiDBLite consensus disorder prediction 1776 1800 - -
Pste1g00251 1857 ProSitePatterns Zinc finger PHD-type signature. 1722 1762 IPR019786 -
Pste1g00251 1857 MobiDBLite consensus disorder prediction 1776 1790 - -
Pste1g00251 1857 SUPERFAMILY FYVE/PHD zinc finger 237 291 IPR011011 -
Pste1g00251 1857 ProSiteProfiles JmjN domain profile. 28 69 IPR003349 -
Pste1g00251 1857 Pfam JmjC domain, hydroxylase 414 530 IPR003347 -
Pste1g00251 1857 SMART bright_3 96 190 IPR001606 GO:0003677
Pste1g00251 1857 Pfam jmjN domain 29 62 IPR003349 -
Pste1g00251 1857 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1440 1503 IPR013083 -
Pste1g00251 1857 Gene3D Cupin 13 128 - -
Pste1g00251 1857 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1707 1764 IPR013083 -
Pste1g00251 1857 Pfam ARID/BRIGHT DNA binding domain 101 185 IPR001606 GO:0003677
Pste1g00251 1857 SUPERFAMILY FYVE/PHD zinc finger 1440 1501 IPR011011 -
Pste1g00251 1857 CDD ARID 97 185 - -
Pste1g00251 1857 Gene3D Cupin 288 532 - -
Pste1g00251 1857 SUPERFAMILY FYVE/PHD zinc finger 1716 1767 IPR011011 -
Pste1g00251 1857 FunFam Predicted protein 349 552 - -
Pste1g00251 1857 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 170 287 IPR013083 -
Pste1g00251 1857 Pfam C5HC2 zinc finger 624 675 IPR004198 -
Pste1g00251 1857 SMART JmjN_1 27 68 IPR003349 -
Pste1g00251 1857 SUPERFAMILY Clavaminate synthase-like 367 562 - -
Pste1g00251 1857 ProSiteProfiles ARID domain profile. 95 189 IPR001606 GO:0003677
Pste1g00251 1857 Pfam PLU-1-like protein 957 1197 IPR013637 -
Pste1g00251 1857 Pfam PLU-1-like protein 1156 1412 IPR013637 -
Pste1g00251 1857 CDD PHD_RSF1 244 288 - -
Pste1g00251 1857 ProSiteProfiles JmjC domain profile. 381 547 IPR003347 -
Pste1g00251 1857 PANTHER LYSINE-SPECIFIC DEMETHYLASE 23 1012 - -
Pste1g00251 1857 ProSiteProfiles Zinc finger PHD-type profile. 241 291 IPR019787 -
Pste1g00251 1857 SMART PHD_3 243 289 IPR001965 -
Pste1g00251 1857 SMART PHD_3 1721 1763 IPR001965 -
Pste1g00251 1857 SMART PHD_3 1457 1501 IPR001965 -
Pste1g00251 1857 FunFam Transcription factor jumonji (JmjC) domain-containing protein 14 118 - -
Pste1g00251 1857 Pfam PHD-finger 243 290 IPR019787 -
Pste1g00251 1857 SUPERFAMILY ARID-like 78 200 IPR036431 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00251 Pste-Chr1 882273 904866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00251 37 94 JUMONJI Transcription Factor Family AT4G20400 50.000 2.92e-10 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Pste1g00251 PLU-1 4.3e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00251 1 882273 904866 Pste1g00251 1 882273 904866 ECH