Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00250 GAAGACATAGAGAAAGAAGTGCAATTAATTGCAAGTATTGGTTGGAGCAATGGACACTCTCCCACACTCACAAATGACAATGCCATGAAGAATCCGAAACATCAACATCAGCATCCATGTCGTCGCCGCTGAAACCAGAGGAATGCGATCCCGCGGCGGGGACAGAATCACCTGTCGCCGCCAGATCTAAGCTCCAGAAGATTCCGCCGATTCCAATTCGACGGAGTAAGGAGGCTTCATCATTTCGAGCGGGTGTGGGCGATGAAGAGCAAGAGGAAGATGATTCTTCTTCCATCTTGCTTGCCTCTTCTTTAGGGCTCAATCACATTCGCACGCGCCCCTCTTCTTCCCCTCTTCGCTATTCCTCCTCCCTTGGCGCTCCTTCCTTCTTGCCACAGGATGCTGTCCCTATCAATCACGCCACTCTTAGATCCAAATCTAATTCCCATTCCGGGGAAAAAGTTCCTTTCACTCATTCCCAATCTCTGAGACCTCATTCCCAACTCATTCCCGTGCTAGAGGGTCATCATGCAGCTTTCGCCAGAGAAATTCAATCCCCACGTTTTCAGGAAATCCTGCGACTTACCAGTGGGCGCAGAAAGAGAAACCCTGATATTAAAAGTTTTTCCCATGAACTCAACTCCAAAGGAGTTAGACCATTTCCAATCTGGAAACATCGTGCCTTTGGCCACATGGAGGAAGTCATGGCCGCTATTAGAGTTAAGTTTGAAAAATTAAAGGAAGAAGTCGATTCTGACTTGGGTGGTTTTGCTGGAGATTTGGTGGGTATTCTTGAAAAAAATTTAGTGTCTGATAGTGAATGGAGAGAGAGGTTGGAGGATCTGTTGGTTGTCGCTCAACAATGTGCAAAGATGACTCCCACTCAGTTTTGGAGGAAATGTGAATCTATAGTTCAAAAGCTTGATGACAAACGACAAGAATTACCAATGGGGATACTTAAGCAAGCTCACACTCGCATACTATTTATTCTCACTCGTTGCACTCGCTTGGTACAATTTCAGAAGGAAACCGGATATGAACAAGATCACATTCTGGGTCTTCACCAACTCAGTGATCTTGGGGTCTATTCTGAGCAAATTTTGAAGGCTGCACAGCAGAAATCCAGTATTCCATCAGCTGGACATGACATGGCTGAGAAACAGTTAAAAACATCACATGGTCAAGAGAAGGACAAACTGATAACTAAACCAAGTCAATCTGATCAAGATGTAAGTGTTGTGATTGACAACATGGAGGTTCCTTCCAAAAGTATTGAATCAACTCCTGGTAGTTATAGGATGTCTTCTTGGAGAAAGCTTCCATCTGCTGCTGAGAAAAGGCGAAAAGATCAAGAAGCTGTAGATCTCTCATCCAAAGGTGAACTGGATCACTTGCTAATCAAAAATGAAAATTCTGAAAATTTGGATACTTTATTATGTCATCCTGAACAATCACAATCATCATCAAGAACGCAAAAGGTTTCTTCAGGATTCTGGGGAGATCAACAAAATGTAACATATGAGGATTCAATGATATGCAGGATTTGTGAGGTTGAAATACCAATTGTACATGTGGAGGAGCATTCTCGAATATGCACAATTGCTGATAGATGTGATTTGAAAGGCTTAACTGTAAATGAACGGCTTGAAAGAGTTTCTGAAACCATTGAAAGGATACTGGAATCGTGGACACCAAAAAGCACCCCAAAAAGCACAGATACTCCTGGAGAAAGCTTTGAGCTTGCCACTGTGTCAACATCAAGTGTGCATGAAGAGTTCAATGATTTATCTTTAGAGAGAGACAACCTGACTTGTAGATGCTCTGAAGACATGCTTGACTCTACTGCAGTGCCTGACAATACTTTTGTCATGGAGGATCTGAACCTTTCACCCAGAGTATCATATGAAGCACGCATCTGCTTAAAACCTGATCATGGAACAAAGGTATCTTCAGCTGGAAGCTTGACTCCGAGATCACCATTGGTAACACCACGGACCACACAGATAGAAATGCTACTAAGTGGACGAAAAACATTATCTGAACTTGAAAGTCCTGACCAGATAAGCAAGCTAGTTGAAATAGCCCGAGCTGTTGCAAATGTGAATAACTGTGATTACAGTGCACTGGAGTATATGCTTGATCGCTTAGAAGACCTGAAATATTCCATTGAAGGCAGAAAAGTGGATGCACTTATTGTGGAAACTTTTGGACGACGAATAGAGAAACTTTTGCAGGAGAAATATATATCTCTTTGTGGGCAGATAGAAGATGAAAAGGTGGACTCATCAAATAGCATAGCTGATGAAGAGAGTTTAGTGGAAGATGATACAGTTCGTAGCCTTCGTGCTAGCCCTATTAATGCTTGTTCCAAGGACCGAACCTCTATTGAAGATTTTGAAATAATAAAACCAATTAGTAGGGGTGCATTTGGACGAGTTCTGAAAAAGGCTGATATGATCCGTAAAAATGCAGTTCAAAGTATTTTGGCAGAGCGAGACATCCTTATATCTGTTCGAAACCCTTTTGTGGTTCGATTTTTCTACTCTTTCACATGTAGGGAAAATCTTTACCTAGTTATGGAGTATCTGAATGGTGGAGATCTTTATTCTATGTTGAGAAATCTAGGTTGCTTAGATGAACGTATGGCTCATGTATATATTGCAGAAGTTGTTCTTGCATTGGAGTATTTGCATTCCTTAAATGTGATTCACAGAGACTTGAAGCCAGATAACTTACTGATTGGTCAAGATGGTCATATTAAGTTGACAGATTTTGGGCTCTCTAAGGTTGGTCTTATCAACAGCACAGATGACTTATCAGCGCCTTCATTTTCCACCAATGGCTTTCTAGGAGATGATGAACCAAAACCTCGGCATTCTTCAAAAAGAGAAGAGCGTCAAAAACAATCAGTAGTTGGCACCCCGGATTATTTGGCACCTGAAATTCTTCTTGGCATGGGACATGGTGCAACTGCAGATTGGTGGTCTGTGGGTGTCATACTTTATGAGCTTCTTGTGGGTATTCCACCATTTAATGCAGAACATCCACAGTTTTCTGCTTCATTGTGTTACTGTTGCTACGGCCTTTTGATCGGGGGCATTGCTGATGGACATCCATATTTTTTTCTTTTGCTCAATGCTCTTTGTATGCAAATTTTTGATAACATAATTAACAGAGACATACAATGGCCTAAGATTCCTGAGGAGATCAGCTTTGAAGCATATGATTTGATCAATAAATTATTGAACGAAAATCCAGTCCAAAGATTAGGTGCAACAGGAGCTACAGAGGTTAAACGTCATGCTTTCTTCAAGGATATTAATTGGGATACCCTAGCAAGGCAGAAGGCTATGTTCATTCCATCAGCTGAAGCTCTTGATACAAGTTATTTTATGAGCCGGTACATTTGGAATCCCGAGGATGAACATTGTCTTGGAGGTAGTGATTTTGATGAGATTACTGAAACATGCAGCAGTGGTTCAGGCAGCGATTTATTAGATGAAGATGTAAGAATACTTTCTAGTTTCAGTACCCATGCGCTATAAACTTCCTTTTTAGGTGTAATACTACTTATTTCCATGGATTACTTGATTTTGAGTAGATGACATGTTGGCATTTTGATCCACATGGGGTCATTTTTGACGAAATATTAC 3653 0.4134 MSSPLKPEECDPAAGTESPVAARSKLQKIPPIPIRRSKEASSFRAGVGDEEQEEDDSSSILLASSLGLNHIRTRPSSSPLRYSSSLGAPSFLPQDAVPINHATLRSKSNSHSGEKVPFTHSQSLRPHSQLIPVLEGHHAAFAREIQSPRFQEILRLTSGRRKRNPDIKSFSHELNSKGVRPFPIWKHRAFGHMEEVMAAIRVKFEKLKEEVDSDLGGFAGDLVGILEKNLVSDSEWRERLEDLLVVAQQCAKMTPTQFWRKCESIVQKLDDKRQELPMGILKQAHTRILFILTRCTRLVQFQKETGYEQDHILGLHQLSDLGVYSEQILKAAQQKSSIPSAGHDMAEKQLKTSHGQEKDKLITKPSQSDQDVSVVIDNMEVPSKSIESTPGSYRMSSWRKLPSAAEKRRKDQEAVDLSSKGELDHLLIKNENSENLDTLLCHPEQSQSSSRTQKVSSGFWGDQQNVTYEDSMICRICEVEIPIVHVEEHSRICTIADRCDLKGLTVNERLERVSETIERILESWTPKSTPKSTDTPGESFELATVSTSSVHEEFNDLSLERDNLTCRCSEDMLDSTAVPDNTFVMEDLNLSPRVSYEARICLKPDHGTKVSSAGSLTPRSPLVTPRTTQIEMLLSGRKTLSELESPDQISKLVEIARAVANVNNCDYSALEYMLDRLEDLKYSIEGRKVDALIVETFGRRIEKLLQEKYISLCGQIEDEKVDSSNSIADEESLVEDDTVRSLRASPINACSKDRTSIEDFEIIKPISRGAFGRVLKKADMIRKNAVQSILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSMLRNLGCLDERMAHVYIAEVVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSAPSFSTNGFLGDDEPKPRHSSKREERQKQSVVGTPDYLAPEILLGMGHGATADWWSVGVILYELLVGIPPFNAEHPQFSASLCYCCYGLLIGGIADGHPYFFLLLNALCMQIFDNIINRDIQWPKIPEEISFEAYDLINKLLNENPVQRLGATGATEVKRHAFFKDINWDTLARQKAMFIPSAEALDTSYFMSRYIWNPEDEHCLGGSDFDEITETCSSGSGSDLLDEDVRILSSFSTHAL 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00250 1142 SUPERFAMILY Protein kinase-like (PK-like) 757 1093 IPR011009 -
Pste1g00250 1142 CDD STKc_MAST_like 766 1070 - -
Pste1g00250 1142 MobiDBLite consensus disorder prediction 382 396 - -
Pste1g00250 1142 SMART serkin_6 760 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00250 1142 Gene3D Transferase(Phosphotransferase) domain 1 828 978 - -
Pste1g00250 1142 Gene3D Phosphorylase Kinase; domain 1 759 827 - -
Pste1g00250 1142 MobiDBLite consensus disorder prediction 1 59 - -
Pste1g00250 1142 MobiDBLite consensus disorder prediction 347 365 - -
Pste1g00250 1142 MobiDBLite consensus disorder prediction 335 397 - -
Pste1g00250 1142 MobiDBLite consensus disorder prediction 913 931 - -
Pste1g00250 1142 ProSiteProfiles Protein kinase domain profile. 760 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00250 1142 FunFam Probable serine/threonine-protein kinase cot-1 827 986 - -
Pste1g00250 1142 Pfam Protein kinase domain 777 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00250 1142 MobiDBLite consensus disorder prediction 905 932 - -
Pste1g00250 1142 PANTHER SERINE/THREONINE-PROTEIN KINASE 451 1093 - -
Pste1g00250 1142 Gene3D Transferase(Phosphotransferase) domain 1 1011 1083 - -
Pste1g00250 1142 ProSitePatterns Serine/Threonine protein kinases active-site signature. 863 875 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00250 Pste-Chr1 880531 892402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00250 26 1122 AGC Kinase Gene Family AT5G62310 59.737 0.0 1288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Pste1g00250 Pkinase 4.3e-51 CL0016