Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00243 GATGCTATCATCTCCTTTCCCACCCTTATTCATTTACCAGTGTCTTTAGAGTTTAGATCTCAAACTTGGAACTTTAGAAAAAGAGATAATAATAGGAGAAATACGACATCATCAATCGGTCGTTTCTCCAAACCCAAACGACAACCCCATAAAGTTCGTTTCACTTTCCCTTTCTTTCTTTGAGAAGCCGTCCTTAGTCGCAACAGAACACGACGATTCCCAGAGGAAGTGGGCGAAATTTGAAGATAAGGATCAGTGATAGAGCGATATAACGAACCAGAATTTCCTTTTCAACCTCAGCTAGCTATTTGGTAATGTAACTCAAAGGATTTACATATTGCAAAGCAAGAAAGTCTTGGCTTCCAAAGGTACAAGACCACGAGTATATAAGGCCTGAAGTTGAAGTGTTGGACCAATGGACTGTGCAGCTGCAAGAAAGACACAAAAGGCTGACCGAGAAAAGTTAAGAAGGGATCGTCTCAATGAACAGTTTGTAGAATTGGGTAACATTTTAGACCCTGATAGGCCCAAAAATGACAAAGCAACCATTCTAGTAGATACAATTCAATTGCTGAAGGACCTTACTTCTCAAGTTAGTAAACTCAAAGATGAATATACTATGCTAAATGAAGAATCTCGTGAGGAGAAAAATGATCTTAGGGAAGAGAAAGCTTCTCTTAAATCAGATATTGACAACTTGAATAATCAGTATCAGCAGCAGCTCAGGACTATGTTTCCGTGGACTGCAATGGATCATTCTGTTATGATGGCTCCACCATCATACCCATTTCCAATGCCAATGGCAGTACCTCCTGGTCCAATTCCCATGCAGCCATACCCCTACTTTGCGAATCAACATCCTGCAGTCATCTCTAACCCCTGTTCAACTTTTGTTCCTTATTTAGCCCCCAATACTATTGTTGAACAACAATCCACCCAGTATGTATCCCCTCCGCATCATCCAGGTGGTCGGTCCAATGTGTCTGGAAAACAAGAGTCCAAAAGCAAATCATCCAGGGAGAGCAAGGCTGAAAAGAATGAGGATTCTAATGATGTCACTACAGACCTCGAGTTGAAGACTCCTGGGTCTTCTGCAGATGAGGATTTATCATCCGGACAAAGAAAATCAAACAAGTTGTCAAGGAGGGAAAGCAGCTGCACAGAAGGGAGTTCATTAGGTAGGTGTTCTTCTTCTAGGAGTGTTCAGGATAGCTCATCAAGCAGTGTAGTGGCAAGCAGAAAGGATAATGAATGAAAAATATGCCTGGAAAACCCTGAAGTTTTTCATTGTGTATCTGTTGCAACTATGGAGGTATAAGTCATTCTGTTATCTCAAAATAAAAGTCTGAGTCTCTTCTGTTATCTCTTCCTGACTATGAACTTGGTCCAAGTAGGTTGAAATGCTAGATAATTTAAGTTAAGCATAAATTTTCCCTTCTGGGGCAAAACTTGAAATTTCATTGGAAAATGAACAAGTTGACCAGTGTAGCTAACATATAGGTTTGTAAATTTTTGCATAATTGTTAGAATTGCATCATTCAATACAATTCAGCAGGCTAACGATTTGTATCATGTAATGAATTGCCTGACTTTGAATTGTATAATACTTGCTTGAGTTGATATGAATGCAATTTCATATAATTAGTGCAATAAACTTAAGTCTGAA 1666 0.3926 MDCAAARKTQKADREKLRRDRLNEQFVELGNILDPDRPKNDKATILVDTIQLLKDLTSQVSKLKDEYTMLNEESREEKNDLREEKASLKSDIDNLNNQYQQQLRTMFPWTAMDHSVMMAPPSYPFPMPMAVPPGPIPMQPYPYFANQHPAVISNPCSTFVPYLAPNTIVEQQSTQYVSPPHHPGGRSNVSGKQESKSKSSRESKAEKNEDSNDVTTDLELKTPGSSADEDLSSGQRKSNKLSRRESSCTEGSSLGRCSSSRSVQDSSSSSVVASRKDNE 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00243 279 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 73 IPR036638 GO:0046983
Pste1g00243 279 Coils Coil 5 25 - -
Pste1g00243 279 SMART finulus 12 62 IPR011598 GO:0046983
Pste1g00243 279 CDD bHLH_AtILR3_like 11 82 - -
Pste1g00243 279 Gene3D - 3 68 IPR036638 GO:0046983
Pste1g00243 279 PANTHER TRANSCRIPTION FACTOR BHLH121 2 276 IPR044579 GO:0003700|GO:0006879
Pste1g00243 279 MobiDBLite consensus disorder prediction 245 279 - -
Pste1g00243 279 Coils Coil 46 105 - -
Pste1g00243 279 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 56 IPR011598 GO:0046983
Pste1g00243 279 MobiDBLite consensus disorder prediction 217 232 - -
Pste1g00243 279 Pfam Helix-loop-helix DNA-binding domain 7 56 IPR011598 GO:0046983
Pste1g00243 279 MobiDBLite consensus disorder prediction 195 216 - -
Pste1g00243 279 MobiDBLite consensus disorder prediction 173 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00243 Pste-Chr1 858852 864300 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00243 4 243 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 63.052 1.84e-95 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste1g00243 HLH 4.9e-09 No_clan