Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00230 GAATCCATATCCATCGATCCATACAAGATATTACTATCTTGAATACTTCTACTCACTTTGTAACTGGCATGGAGTCACATGCAATCCTATGCTTCAAAGAGTTACAAAGTTGAACTTGAAAGGATACAAGTTGAAAGGATTTATATCTCCCTGTGTTGGCAATCTCTTTATGATAAACTTCAACCTTGCAAACAATAACTTCTATGGAAAAATCCCGCAAGAATTGGGACGGTTATCACAACTGCAACTACTCTCTGTTGAAAACAACTCATTGGTGGGAGAAATTCCTACAAATTTGACAAGTTGCACTCAACAACAAGTTAACTGGAGGAATTCCATCATTCATAGGAACCTTTCATCACTAATTGATATCTCAGGAGATATTCCTAGTGAAATGTGTCGTCTTAAAAGATTGAAATACCTATCATTGGGTATCAACAAAATGAGTGGAATATTACCTTCTTGTCTTTATAATATGTCATCTCTTACTCTAATCACAATTACAGAAAATCAATTTAATGGCTCTCTTCCATCCAACATGTTCCATACCCTCCCAATCTTCAAAGCTATTAATATTGGTGGCAACCAACTCTCGTGTCTAATCCCATCTTCCATTACAAATTCATCTATCCTTTCAACATTTGAAATAGGTCAAAACCATTTCATGTGCCAAGTTCGAGTTTGGGAAGCTACAAGATCTTCGATTAAATTGCAAATCTTAGCTATATCTTACAATAATTTTGGAGGTCATTTGCCAAATTCCTTGGGCAATTTATCCACCCAGTTTAAAATCCCTTTGACAATAGGAAATCTAATTGGCCTAACTCTCTTGATAATATATGATAACCACATTCATGGTACTATCCCAACAACTTTTGGGAAATTTAAGAGGATGCAAGTGTTAGACTTAAATAGAAATAAATTGTCACGAGATATAGGATTTTTCATTGGAAATCTTAGTCAATTGTATTTTTTGGGTATTGGAGATAATATGTTAGAAGGAAATATTCCTCCAAATATAGAAAATTGCAACAAGTTACAATACTTAATCTTTTCAAAAAATAACCTCACAGGAACCATACCCATAGAGGTTTTTAATCTTCCATTATTACAAGTTGATTTGTCACAAAACTCTTTGAGTGGTAGTATACCAAAAGAAGTAGGCAACCTAAAATCTCTCAATTTGCTAAAATTATCTTACAATAATTTGTCCGGTGATATTCCTTTAACTATTGGAGAATGCATAATGGAATTCTTTACAAGGATCCATACCATCCTCTTTGGCATCACTCGAGGGCTTCAACGTCTAGACCTTTCACAAAACTATTTATCTGGATCAATTCCTCATGCTTTGCAAAACTTATCTTTCCTACAACATTTCAATATATCTTCTAATATGTTGGATGGTGAGGTACCAATTGAAGGTGTCTTTCAAAATGCAAGTGGTTTTGTTGTTATTGGAAACAATAAGCTTTGTGGAGGTATTTCAAAACTACATTTACCACCATGTCCTTTTGAAGGTATGAAACTTGCAAAACATCACAAGTTCAAGTTAATGACAAAGAATCATGGTCGTGTTGCTTTTCTTCTCATATTGATTATTTTTCTGATTATCTACTGGATAAGGAAAAGGAGTAAAAAATCATCTTTGAATTCACTAACAATTGACCAATTGACTAAAGTTTCATACCAAAGCCTACATAAAGGAACCAATGGGTTCTCAACGACAAACTTGATAGGATCTGGGCATTTTAGTTCTGTCTACAAAGGAACTCTCGAATTAAAAGATAAAATTGTTGCCATAAAGGTTTTAAACCTTCAAAGAACAGGAGCCCACAAGAGTTTCATTGTTGAATGCAATGCACTTAAAAATGTCAAACATCGAAATTTGGTTCAAATTTTGACATGTTGTTCCAGCATCGATTACAAAGGCCAAGAATTTAAAGCTCTAGTTTTTCAGTACATGAGAAATGGAAGCTTAGAACAATGGTTGCATCCGACGACTCTAAGTGTAGAGAATCAAAGAACATTGAACTTTGACCAAAGATTAAATATCATGACTGATGTTGCTTTTGCAATGCATTATCTTCATCATGAATGCGAGCCTTCAATCATTCATTGTGATTTAAAGCTAAACAATGTCTTTCTTGATGATAACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTCCTCTCCATCATTGAAGATACCACTTCTACACAAACTAGTACAATTGGAATAAAGGGTACTATTGGCTATGCTCCTCCAGAGTATGGAGTGGGTTTTGAGGTATCTAGGAGTGGAGACATGTACAGTTTTGGGATTTTTATGTTGGAGATGCTTACCGGAAGAAGACCTATAGATGAAATATTTGAAGATGGTCAAAATTTGCATAGCTTTGTGGCAAATTCATTTCCTGATAATCTTTTCCAGATTTTGGACCAATCACTTGTGCCAAAATATGAAGAAGAAACAATAGAAGAAAATAACGATAAGAATCTTACTCCAATTATTGAAAAGTGCTTAGTTTTACTATTTAAGATTGGACTTGCTTGTTCAATGGAGTCACCAAAAGAAAGAATGAATATGATGGATGTCACTAAAGAGCTAAGCAAAATCAGAACAATCTTTCTT 2641 0.3427 MLQRVTKLNLKGYKLKGFISPCVGNLFMINFNLANNNFYGKIPQELGRLSQLQLLSVENNSLVGEIPTNLTSCTQQQVNWRNSIIHRNLSSLIDISGDIPSEMCRLKRLKYLSLGINKMSGILPSCLYNMSSLTLITITENQFNGSLPSNMFHTLPIFKAINIGGNQLSCLIPSSITNSSILSTFEIGQNHFMCQVRVWEATRSSIKLQILAISYNNFGGHLPNSLGNLSTQFKIPLTIGNLIGLTLLIIYDNHIHGTIPTTFGKFKRMQVLDLNRNKLSRDIGFFIGNLSQLYFLGIGDNMLEGNIPPNIENCNKLQYLIFSKNNLTGTIPIEVFNLPLLQVDLSQNSLSGSIPKEVGNLKSLNLLKLSYNNLSGDIPLTIGECIMEFFTRIHTILFGITRGLQRLDLSQNYLSGSIPHALQNLSFLQHFNISSNMLDGEVPIEGVFQNASGFVVIGNNKLCGGISKLHLPPCPFEGMKLAKHHKFKLMTKNHGRVAFLLILIIFLIIYWIRKRSKKSSLNSLTIDQLTKVSYQSLHKGTNGFSTTNLIGSGHFSSVYKGTLELKDKIVAIKVLNLQRTGAHKSFIVECNALKNVKHRNLVQILTCCSSIDYKGQEFKALVFQYMRNGSLEQWLHPTTLSVENQRTLNFDQRLNIMTDVAFAMHYLHHECEPSIIHCDLKLNNVFLDDNMVAHVSDFGIARLLSIIEDTTSTQTSTIGIKGTIGYAPPEYGVGFEVSRSGDMYSFGIFMLEMLTGRRPIDEIFEDGQNLHSFVANSFPDNLFQILDQSLVPKYEEETIEENNDKNLTPIIEKCLVLLFKIGLACSMESPKERMNMMDVTKELSKIRTIFL 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00230 851 Gene3D Ribonuclease Inhibitor 2 81 IPR032675 -
Pste1g00230 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 675 687 IPR008271 GO:0004672|GO:0006468
Pste1g00230 851 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 231 476 - -
Pste1g00230 851 SMART serkin_6 544 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00230 851 ProSiteProfiles Protein kinase domain profile. 544 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00230 851 FunFam LRR receptor-like serine/threonine-protein kinase EFR 515 625 - -
Pste1g00230 851 ProSitePatterns Protein kinases ATP-binding region signature. 550 573 IPR017441 GO:0005524
Pste1g00230 851 Gene3D Phosphorylase Kinase; domain 1 509 625 - -
Pste1g00230 851 PANTHER OS04G0122200 PROTEIN 4 850 - -
Pste1g00230 851 Gene3D Transferase(Phosphotransferase) domain 1 626 849 - -
Pste1g00230 851 SUPERFAMILY Protein kinase-like (PK-like) 517 843 IPR011009 -
Pste1g00230 851 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 626 851 - -
Pste1g00230 851 SUPERFAMILY L domain-like 2 230 - -
Pste1g00230 851 Pfam Protein kinase domain 546 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00230 851 SUPERFAMILY L domain-like 230 464 - -
Pste1g00230 851 Gene3D Ribonuclease Inhibitor 82 231 IPR032675 -
Pste1g00230 851 Gene3D Ribonuclease Inhibitor 232 480 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00230 Pste-Chr1 812923 815918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00230 3 850 Receptor kinase-like Gene Family AT3G47570 38.266 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pste1g00230 Pkinase 1.1e-39 CL0016