Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00217 ATGAGCTCATCCTCAGTTAACAAGCCTTCTTCTTCTCCTTCATCTCCTTCAGTCTTGAAGCTATTTGGTTTCTCTTTGACAGCAACTGATGATGACAGGAGTAGAAAAATCCAGTGTCTATTCTGCAATCGTGAATTTCAGAATTTGCAAGCGTTGGGGGGTCACCAAAATGCACATAGGAGAGAAAGACAAATGGTTAGGTTGGCCCAATTTGAATATATGCGTCTACACCAAAGAAACCAAATATTCCAAACGGTTACACCTCATGTGGTTGCACAAGGAGCATCACTAACCTCTGTTTTCGGTGGTGCAACTCGGTTCTGGACAGCACCTGCTGAATCACCACAGAAGCTACCTGTGGTGGAGCCACCAGGTACGCTTCCAGTGCCTGTTGTACACGTACCGGTAATAGGGGTTGATGATAATATTGATCTAGAACTGAGACTAGGCACAACTTCTAAGGAATCTGACAAGTGA 477 0.4444 MSSSSVNKPSSSPSSPSVLKLFGFSLTATDDDRSRKIQCLFCNREFQNLQALGGHQNAHRRERQMVRLAQFEYMRLHQRNQIFQTVTPHVVAQGASLTSVFGGATRFWTAPAESPQKLPVVEPPGTLPVPVVHVPVIGVDDNIDLELRLGTTSKESDK 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00217 158 ProSiteProfiles Zinc finger C2H2 type domain profile. 37 64 IPR013087 -
Pste1g00217 158 ProSitePatterns Zinc finger C2H2 type domain signature. 39 59 IPR013087 -
Pste1g00217 158 PANTHER ZINC FINGER PROTEIN 5 16 92 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00217 Pste-Chr1 761803 762279 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00217 17 93 C2H2 Transcription Factor Family AT1G67030 38.235 3.13e-14 65.5