Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00185 GAATAGAAATACCACCATCAAGAAGCATTCTCTCAAATCTCATCAAAATGGAGTATTTTCCTCTGATCTTACTTGTATTTTTGTCTATATTTGTCCACTTGTTTTTTCTCTTTACATTGAACTCGTTATGCTTGCTAAATATGACAGCCTTTGCTGTAAGAGATGAGACTAATCACTTGGCACTTTTGAAATTTAAGGAATCCATATCCACTAATCCATATGGAATCTTTCTCTCTTGGAATACTTCTACTCACTTATGTAATTGGCAAGGAATCACATGCAATCACAAGCTTCAAAGAGTTACAGAGTTAAACTTATTAAGATACGAGTTGAAAGGGTTCATATCTCCTCCTGCAAGAAATCTCTCTTATATGAAGAAATTTGACTTTAGAAACAACAACTTCTATGGGAACATCCCACAAGAAATTAGGACGAATGTCACAATTGCAACAACTCTGTTGACCATAACACTTTGGACAAATTGCTACAAACTTGACAGATCACTTCGAAAGCTTCAATATTTGAATGTTCATAATAATGAGTTGACAGGAAAAGTCTCATCATTCATAGGAAATCTTTCATTCCTTGATTATTTCTTGGTACAAAATAACAACTTGGATAGAAATATTACACCAGAAATATGTCGTCTCGAAAGGTTGACATTCATAGGTTTGTCAGTCAACAAATTCAGTGGAACATTTCCTTCTTGTCTTTATAACATGTCATCTCTTACTATAATTTCAGCTACATCAAATCAGTTTAATGGCTCTCTTCCACCCTACATGTTTAATACCCTCCTTAATCTCCAAATGCTTTATATCGGTGTGAATCAATTCTCAGGTCCAATCCCATCTTCTATCACTAATGCATCCACTCTTTCAAATTTTGAAATAAATATAAATCATTTCATAGGGCAAGTTCCAAGTTTGAGAAAGCTACATAACCTTTGGGGAAATTCAACTAATGACATGGAGTTTTTAAATAAGTTGAAATTCTTGGATATATCCTACAATAATTTTAGAGGTCATTTGCCTAATTTCTTGGGCAATTTATCCACCTATCTTAGTCAACTATATCTTGGAGGTAATCAAATATCAGGAGAAATCCCAACAACGATAGAAAATCTAGTTGGCTTGATTCTCTTGACTATGGAAGTTAACCACATTGATGGGATTATCCCAACAACTTTTGGGACACTTAAGAATATGCAATTTTTAGACTTAAGTCGAAACAAGTTGTCAGGAGAGATAGGAACCTTCATAGGAAACCTTAGTCAATTGTTTCATTTAGGTGTGGAAGAAAATATGTTAGAAGGGAATATTCCTCCAAGTATAGGAAAGTACCAAATGTTACAAGAATTAGATCTTTCACAAAACAACCTTAGAGGAATGGTACCCTTGGAACTGTTTAATCTTTCATCTCTGACAAATATGTTAAATTTGTCACATAACTCATTGAGTGGTAGTATAGTGAAAGAGCTTAAAATCATTTATCTGGTGACATTCCAAGTACCATCGGAGAATGCACAATGTTGGAGTTCCTTTATTTGCAAGGAAATTCTTTACAATGAATCATACCATCTAGTCGAGCATCTCTCAAAAAATATTTCTTCCTTAGAATATTTCAATGCATCTTTTAACATGTTAAATGGTGAGATACCAACTGAAGGTTCCTTTAAAAATGCAAGTGGGATAGCAGTAATTCGAAATAGTAATCTTTGTGGAGGTATTTCAAAATTGCATCTACCACCATGCCATGTCAAAAGTAAAAAAGTTGCAAAACATCAACAGTTTCAGTCAATGATAGTAGTGATGCTTTGCTTTTATTCTTCTCGTATTATCAATTACTCTAACTATCTACTGGATGAGGAAAAAGGAGTAAAAAATCATCTTTGTATTCACCAACAATTGGTCAACTGCCAAAAGTTTCATATTAGATCCTACACAATGCAACTTATGGAATCTGGGAATTTCAGCTCGATTTTCAAAGGAACACTTGAGTTAGAAGGAAAAATTATTGTTGTAAAGGTCCTAAAACTTGAAAGAAAAGGAGCTCACAAGAGTTTCATAGCTGAATGCAATGCACTTAAAAACATTAGACATCAAAATCTGGTTCAAATTTTGACATGTTGTTCTAGGACAGATTACAAAGGTCAGGAA 2159 0.3372 MEYFPLILLVFLSIFVHLFFLFTLNSLCLLNMTAFAVRDETNHLALLKFKESISTNPYGIFLSWNTSTHLCNWQGITCNHKLQRVTELNLLRYELKGFISPPARNLSYMKKFDFRNNNFYGNIPQEIRTNVTIATTLLTITLWTNCYKLDRSLRKLQYLNVHNNELTGKVSSFIGNLSFLDYFLVQNNNLDRNITPEICRLERLTFIGLSVNKFSGTFPSCLYNMSSLTIISATSNQFNGSLPPYMFNTLLNLQMLYIGVNQFSGPIPSSITNASTLSNFEININHFIGQVPSLRKLHNLWGNSTNDMEFLNKLKFLDISYNNFRGHLPNFLGNLSTYLSQLYLGGNQISGEIPTTIENLVGLILLTMEVNHIDGIIPTTFGTLKNMQFLDLSRNKLSGEIGTFIGNLSQLFHLGVEENMLEGNIPPSIGKYQMLQELDLSQNNLRGMVPLELFNLSSLTNMLNLSHNSLSGSIVKELKIIYLVTFQVPSENAQCWSSFICKEILYNESYHLVEHLSKNISSLEYFNASFNMLNGEIPTEGSFKNASGIAVIRNSNLCGGISKLHLPPCHVKSKKVAKHQQFQSMIVVMLCFYSSRIINYSNYLLDEEKGVKNHLCIHQQLVNCQKFHIRSYTMQLMESGNFSSIFKGTLELEGKIIVVKVLKLERKGAHKSFIAECNALKNIRHQNLVQILTCCSRTDYKGQE 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00185 704 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 307 493 - -
Pste1g00185 704 Pfam Protein tyrosine and serine/threonine kinase 636 698 IPR001245 GO:0004672|GO:0006468
Pste1g00185 704 Pfam Leucine rich repeat 339 397 IPR001611 GO:0005515
Pste1g00185 704 SUPERFAMILY Protein kinase-like (PK-like) 634 699 IPR011009 -
Pste1g00185 704 Gene3D Phosphorylase Kinase; domain 1 620 702 - -
Pste1g00185 704 SUPERFAMILY L domain-like 40 335 - -
Pste1g00185 704 Gene3D Ribonuclease Inhibitor 224 301 IPR032675 -
Pste1g00185 704 PANTHER OS04G0122200 PROTEIN 37 700 - -
Pste1g00185 704 FunFam Leucine-rich repeat receptor protein kinase EMS1 149 245 - -
Pste1g00185 704 Gene3D Ribonuclease Inhibitor 302 571 IPR032675 -
Pste1g00185 704 Gene3D Ribonuclease Inhibitor 39 221 IPR032675 -
Pste1g00185 704 SUPERFAMILY L domain-like 305 559 - -
Pste1g00185 704 ProSiteProfiles Protein kinase domain profile. 631 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00185 704 Pfam Leucine Rich Repeat 313 335 IPR001611 GO:0005515
Pste1g00185 704 Pfam Leucine rich repeat N-terminal domain 44 79 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00185 Pste-Chr1 682141 684547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00185 39 704 Receptor kinase-like Gene Family AT3G47570 33.333 1.05e-115 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pste1g00185 PK_Tyr_Ser-Thr 3.6e-06 CL0016