Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste1g00174 | TATTGATACATCCATGGGCGATGGTGTCTTATCTAACAACGTTGTTATCCTCCTCATTGCCGTGGGTTCTGCTGCTTTGGTTGTCTCAATCTACCATGTCATAGCCATTTGCTTATGCAACCATGGCACCCAAAACCCACCACCGCCAATGGGTGCTTCTTCTTCGGTTGTGCACTTGATTCCAACACACACTTACCGCAAAAAGAAAGTTGATCATCTAGTTCAGGGCCAACCCCAACCCAACGCTAGTTCTTGCGGGTTAGGTGGTGAGGAGAATGGAAGAGAGACGTGTGCCATATGCTTGGGAGATTTTGAAGAGGGTCAAGAGTTGAGGACGATGCCTGAGTGCATGCACTCTTTCCACGTGGCATGCATTGACAGATGGCTGAGTTGGCACTCGAGTTGCCCCATTTGTCGCAGCAGTGCCACGCCTTCTCTGGAGGTGGGAGGTGCTCCACTCTCAGCA | 466 | 0.5064 | MGDGVLSNNVVILLIAVGSAALVVSIYHVIAICLCNHGTQNPPPPMGASSSVVHLIPTHTYRKKKVDHLVQGQPQPNASSCGLGGEENGRETCAICLGDFEEGQELRTMPECMHSFHVACIDRWLSWHSSCPICRSSATPSLEVGGAPLSA | 151 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste1g00174 | 151 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 39 | 141 | IPR013083 | - | |
Pste1g00174 | 151 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 10 | 137 | IPR044675 | - | |
Pste1g00174 | 151 | SUPERFAMILY | RING/U-box | 92 | 141 | - | - | |
Pste1g00174 | 151 | SMART | ring_2 | 93 | 134 | IPR001841 | - | |
Pste1g00174 | 151 | CDD | RING-H2_EL5-like | 93 | 135 | - | - | |
Pste1g00174 | 151 | Pfam | Ring finger domain | 92 | 135 | IPR001841 | - | |
Pste1g00174 | 151 | ProSiteProfiles | Zinc finger RING-type profile. | 93 | 135 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste1g00174 | Pste-Chr1 | 653962 | 654597 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste1g00174 | 57 | 140 | C3H Transcription Factor Family | AT2G17450 | 45.238 | 1.92e-20 | 81.3 |