Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00174 TATTGATACATCCATGGGCGATGGTGTCTTATCTAACAACGTTGTTATCCTCCTCATTGCCGTGGGTTCTGCTGCTTTGGTTGTCTCAATCTACCATGTCATAGCCATTTGCTTATGCAACCATGGCACCCAAAACCCACCACCGCCAATGGGTGCTTCTTCTTCGGTTGTGCACTTGATTCCAACACACACTTACCGCAAAAAGAAAGTTGATCATCTAGTTCAGGGCCAACCCCAACCCAACGCTAGTTCTTGCGGGTTAGGTGGTGAGGAGAATGGAAGAGAGACGTGTGCCATATGCTTGGGAGATTTTGAAGAGGGTCAAGAGTTGAGGACGATGCCTGAGTGCATGCACTCTTTCCACGTGGCATGCATTGACAGATGGCTGAGTTGGCACTCGAGTTGCCCCATTTGTCGCAGCAGTGCCACGCCTTCTCTGGAGGTGGGAGGTGCTCCACTCTCAGCA 466 0.5064 MGDGVLSNNVVILLIAVGSAALVVSIYHVIAICLCNHGTQNPPPPMGASSSVVHLIPTHTYRKKKVDHLVQGQPQPNASSCGLGGEENGRETCAICLGDFEEGQELRTMPECMHSFHVACIDRWLSWHSSCPICRSSATPSLEVGGAPLSA 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00174 151 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 39 141 IPR013083 -
Pste1g00174 151 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 10 137 IPR044675 -
Pste1g00174 151 SUPERFAMILY RING/U-box 92 141 - -
Pste1g00174 151 SMART ring_2 93 134 IPR001841 -
Pste1g00174 151 CDD RING-H2_EL5-like 93 135 - -
Pste1g00174 151 Pfam Ring finger domain 92 135 IPR001841 -
Pste1g00174 151 ProSiteProfiles Zinc finger RING-type profile. 93 135 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00174 Pste-Chr1 653962 654597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00174 57 140 C3H Transcription Factor Family AT2G17450 45.238 1.92e-20 81.3