Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00173 ATGCAGTGTCACAGAACAACGGGGCAGGTGGTGCTGCCTGTGTTCTATGACGTTGATCCCTCTGAAGTGCGTCACCAAACGGGTCGTTTTGGAGAAGGGTTTATGAAGCTTTTGAAGAGGGTTTTGGAAAAGGAAGAGCAAAAGTTGTTGAAATCGTGGGGTTATCTGAATTGGAGGGAGTCCCTTCGTAAGGTTGCTGCGTCAGTCGGTGGAGAAATGGAGACTGCTAATAAGATAGACCTCCTCGTAGAACATTGGAGGGAGGCAATTTGTGAGGCTGCTGCCATCACAGGAGATGAAGTCTCAATGTCCTTTGTTGAAAAGGAGTTGGCTTATAATCAGATAAACTTTCTCGTGAACCATTGGAGGGAAGCACTTTTTGCTGAGGCTGCTAGGGACTCAAGGTTTGCAGTCCTAAGTTCCAGTGGATTATTGGTTAATGAAACACACCTTGCCATGAAGCGTTGGACGGATGCACTCCGTGAAGCTGCTGGCATTGCAGGGGGAACAAAAGCTATAGAGGGACTGGCTTTGAAGTTACCAAGAGCTAATATAAAATGTTTGAGCACTAAATCTTTTGAGAAAATGAAGAAACTCAGGCTGCTTCAACTTGCTGGAGTAGAACTTCTTGGAAATTTTGAATATCTTTCTAGAGATCTTAGATGGCTTTGTTGGCATGGATTTCCTTTTACATGCATACCGACAAACTTTTATCAAGGAAGCTTAGTTGCCATTGAGTTAGAAAATAGTAAGATGATGACTGTGTGGAAACAGACCCAGACTCCAGACTTTTCGAATTTGCCTAATCTTGAAAAGCTAGTACTCAGAGATTGTCCACGGCTATCTGAGATTTCCTTTACCATTGGACATCTCAATAAGATTGACAAGTTAGAAGAGGACTTGGTACAAATGGAGTCTTTGACAACTCTTGTTGCAGATAAGACTGCAATAACAACGTTACCTTTTTCAATAATTAGATCAAAAAGCATTGGATATATTTCTTTGTGTGGCTATCGAGGATTCTCCCGAGATGTGTTTCCATCCATCATTTGGTCTTGGATGTCACCAACGAATAGTCTCTCTTCCCACATTCAAGCATTTGCAGGCATGTCATCTCTTGTTTCTTTAGATGTTCCTAGTATCAGTTCCAATCACCTATCATATATTTACGAGGACCTTCCAAGTCTTCAAAGTCTTTGGATAGAGTGTGGCTCAGAGCTTGAACTTTCTCGAGATACAAAAAGTATTTTGGATGCTTTATATACTACAAACTCTAAGCAATTGGAATCAATTGCAACTGCATCACAAATGCATAATATGAATGTTTTTACATTAATTGAATGCAACAATCAAGTGCATGACTCTGAATCAAATAATTCCTCGAGATCACTTTTAATTCAAATGGGAATGAGTTGCCACATCACTCATATGTTGAAACAAAGAATTATACAGAATATGACTACTGCTGATCAAGGTTGCGTGCTCCCTAGTGATAATTATCCAGATTGGTTAACCTTCAACAATGATGGTTCTTCTGTGATTTTTGAAATCCCTCTAGTGAATGGATGTAACTTGAAGACAATGATGTGTCATGTTCATTATTCTTCCCCACATAATATATCGTCAGACGACCTTAAAATTTTGCTGGTGATAAATCACACAAAGGCCACCATCCAACTTTATAAGGGAAATGTATTAGCCTCATTTGAAGATGAGGAATGGCAAAGGGTACTCTCACAAATAGAGCCTGGAAACAAAGTGCAAATAGTTGTTGTATTTCGGACTAGATTAATTGTTAACAAGACAACAAGTTATCTTATATACAAGCCAATGGATGAAAAAATAGAGCACTGCCAAGCACCAAATAAGAATGTAATTGTTTCCAGTGGTGATGAAAATTTATGTCTTGTCAGGTTGACATCTACTCAAGTGGAATCCATGGATGACTTAAGGTCGAGTAGATATGCCAGGCTTCACATCACCAAGTGTTCCATTTGGGGAAGAATGTTTAGGCTAGATTTACCTGTAGCACCAGTGATGCCATGGGGATGAACATGGTTTCCGAATTCCGAAAGAAATCCAGATTCAATAAGATTCTTGAATCATGATTCCTTCAAAATGATTTCCCTGACATGGATGTTATTGTCATTTCTGGTAAATTTTATGCATTTTTTCACTTTGCTGGGTGCCAATGATTGTTCAATAGCAAACTTGCATTGATGTGTCAGATTTATTGTTGATAGTTTTTCAATTATATGAAAGAATGACCTATGTTATGCCAAATTGTTATTCTAATTATGCATGTAGAATTTGTCTGGATTCTTATTTGAGCTTCACTTGTTTGAGAATTGGTTGGAGATGCTCTTCTTTCTGTTTTCCATCAGGTTGCATTTGACAGGCTAACATCTCCACATGTTCTGGACTTCTTTCGTGGATGTAAGCATGATCAGAAGCAGATGAATGGTTCATCATGCTGTGGTTGATGATGCAGAACAAAAGCACTTCAGAGATTCACTTGTGAACCGACTTGTTGATGTCAAACGTCTTATTTGATGCAGAGGATCTCTTTGACAAAATAGACATTGAACTCTCCAAATGCCAAGTGGAAGGTGAATCTCAGAGATTACTGACCAGGTGTTGAATTCCATCACATCTTATGTCAATTCCTTTGATATAAAAAAGACCGAAATTGAATCAAAGATGTAAAAGGTCGTTGCTAACTTAATGATCTTGCAAGCCAAATCAGTGATATTTGTTTAAAAAGGCTAGTGATGTTCATGCTGGATCAGGATTGGGTCGGAAAGTATCACAGAAATTGTCATCAACATCTTTGCTTAGTGAAAGTGTTATTCTTGGGAGTTCTGGTAACAAAATAAATTATCTTTAACTGACTCACATCTGACACTGACAACAAGCTATCTATATTTTCCATTGTGGGCATGGGCAGAATGGATAAAGACCACACTTGTTAAACATGTACTCAATGACCCGAGGTTAGATGGTATATTTGGTACCAAATCTTGGGTGGGTGTAGATATCCTCGAGCCAATCCTCAGAGAGTCTTGTGAAACTATGATAGGATAATTTTTTTCTCCATGTATAGAAGTCTTTTAACTTGAGTCCATGGGTAAGCTAAAACACCACATTGATTAGCTCAGTGGTAACTAATACTCTCATTTGAATATTTTGGTTGACTTTACACCTAACTTAATTTAACA 3218 0.3844 MQCHRTTGQVVLPVFYDVDPSEVRHQTGRFGEGFMKLLKRVLEKEEQKLLKSWGYLNWRESLRKVAASVGGEMETANKIDLLVEHWREAICEAAAITGDEVSMSFVEKELAYNQINFLVNHWREALFAEAARDSRFAVLSSSGLLVNETHLAMKRWTDALREAAGIAGGTKAIEGLALKLPRANIKCLSTKSFEKMKKLRLLQLAGVELLGNFEYLSRDLRWLCWHGFPFTCIPTNFYQGSLVAIELENSKMMTVWKQTQTPDFSNLPNLEKLVLRDCPRLSEISFTIGHLNKIDKLEEDLVQMESLTTLVADKTAITTLPFSIIRSKSIGYISLCGYRGFSRDVFPSIIWSWMSPTNSLSSHIQAFAGMSSLVSLDVPSISSNHLSYIYEDLPSLQSLWIECGSELELSRDTKSILDALYTTNSKQLESIATASQMHNMNVFTLIECNNQVHDSESNNSSRSLLIQMGMSCHITHMLKQRIIQNMTTADQGCVLPSDNYPDWLTFNNDGSSVIFEIPLVNGCNLKTMMCHVHYSSPHNISSDDLKILLVINHTKATIQLYKGNVLASFEDEEWQRVLSQIEPGNKVQIVVVFRTRLIVNKTTSYLIYKPMDEKIEHCQAPNKNVIVSSGDENLCLVRLTSTQVESMDDLRSSRYARLHITKCSIWGRMFRLDLPVAPVMPWG 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00173 683 ProSiteProfiles TIR domain profile. 1 62 IPR000157 GO:0007165
Pste1g00173 683 Gene3D Ribonuclease Inhibitor 176 294 IPR032675 -
Pste1g00173 683 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 174 441 IPR044974 GO:0006952
Pste1g00173 683 Gene3D Ribonuclease Inhibitor 295 418 IPR032675 -
Pste1g00173 683 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 67 IPR035897 -
Pste1g00173 683 SUPERFAMILY L domain-like 177 456 - -
Pste1g00173 683 Pfam TIR domain 1 72 IPR000157 GO:0007165
Pste1g00173 683 Gene3D - 1 126 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00173 Pste-Chr1 653922 669865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00173 169 273 WRKY Transcription Factor Family AT4G12020 35.088 1.05e-07 53.5