Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00165 ATGTTACTTCTCATCACTACAACAACAACAAATGCACAATCACCAACTCTCATGGACAATTTTTGCGGCAACTCACTTAACATCACCACCTCATTTAAAACCAACGTTAAAAACGTTCTCTCATGGGTAACCTCTGACCCAGCATCCATAAGCGAAGGATATAACTACACGGTTATAGGCAGCAACAACATCAAAGGTACCAATGATGCTGTTTATGGGTTGTACAGTTGCAGAGTTGACACCACAGGATATTTCTGCAAGTCCTGTCTCAGAACTGCTGCAAGTGAAATCGCTCGAAGGTGTCCCAACAGTGTAAACGCTATTATATGGTATGACATATGCATCATCCGTTACTCTAATGAAAGATTCTGGGGCAAAGACAAATCAGAAATTGTGAAAGCTGAGAGTGCTGTGGCGAGATTGATTATAGAAGCTACTATGGAGAAGCAGCAGTTTTGGGCAGTGGAAGAGTTCGAATGGGTTAACAATGAGAAAAGGTATGGGTGGGTGCAGTGTGAGAGGAGTCTTAGAAATGATCAGTGTGGACAATGTTTACATGCAATGTTAAAGACATTTCCACTCTGTTGTGCTAATGGGACAAAGATTCCTTGGGGAGTTTTTGGTCCAAGCTGTGCCATCAGGTTTGATGATGTCAAATTCTACTTTTTTTTAAATTCAGATGGCGGTACTAAAATGTCAAGAAAGTTGATAATTTTGTTATGTGTGTTCGGGATAGTAACTCTGATGCTATGCTTTAGTGTCTACTACTTCTGGTACAGGAGGAAAGTTAGAAAAGATAAGGTGATTCTTGACGAGGAGGAAACATTGAATACGGACCTGCCCACAATCTCATTAATCTCAATCCAACGTAGTACTAATTACTTTTCAGAAGCATCAAAATTAGGGGAAGGTGGATATGGTAATGTTTATAAGGGAATTCTACCCGATGGAAGACAAATTGCAGTTAAAAGACTCTCGAAAACTTCAGAACAAGGGTCAGATGAGTTTAAAAATGAAGTAATGCTTATAGCTAAATTACAACATCGTAATCTTGTAAGACTTTTGGCACGTTGCTCAGAAGAAGATGAAAAAATACTTGTATATGAGTATATGCCTAATGGAAGCCTCTACTCTCATCTATTTGATTACCAAAATAAAAAGCAACTTGATTGGAAATTAAGATTCAACATTATCAAAGGAATAGCAAGAGGTCTTTTATACCTTCACGAGGATTCTCGACTTAAAATAATTCATAGAGATCTTAAAGCTAGTAATATTCTCTTAGACCATGAAATGAATCCCAAAATATCAGATTTTGGATTGGCAAGAGCATTTGAAATAGGACAAAGTCAAGCAAATACAAAACGAATAATGGGTACCTATGGATACATAGCTCCAGAATATGCTATCTTAGGATTATTTTCAGTAAAATCTGATGTATTTAGTTTCGGAGTTCTTATTTTGGAAATCATCAGTGGAAGAAAGAACAATGTATTCCTTCTATCAGACGATGATCATGATCAAGCTCTTCTTTTACATGCTTGGAACATATGGTGTGGAGGAAACTATCTAGAATTGATGGATCCTATATTAGAAAAGTCCTTCATTGTCAATGAAGTTGTGAGGTGCATACATATTGGACTCTTGTGCGTTCAACAAGATGCAGCAGATAGACCAACCATGTCCACTGTTGTACTAATGCTGGGGAGTGACATAATGTCCCTTCCAAAGCCTAATCACCCTGCATTGTCTATTGGAAAAATGACCCCAAATAAGGAAATAATTTCACGAAGTCCAGAAAGTATTTTTGTAAATTACGCATCAACATCTACCTTTTTACCAAGGTAATCTAGAATACAGAAATGTTAGGAGCCCCTAACATAATTTTTTTACTACTATGTTATTGGTTAACATTTATTTGAAATCACCAATTTAATTTGGTGAATATGAATACATTAGTATTTTTTAATTGGCCAATTAT 1981 0.3665 MLLLITTTTTNAQSPTLMDNFCGNSLNITTSFKTNVKNVLSWVTSDPASISEGYNYTVIGSNNIKGTNDAVYGLYSCRVDTTGYFCKSCLRTAASEIARRCPNSVNAIIWYDICIIRYSNERFWGKDKSEIVKAESAVARLIIEATMEKQQFWAVEEFEWVNNEKRYGWVQCERSLRNDQCGQCLHAMLKTFPLCCANGTKIPWGVFGPSCAIRFDDVKFYFFLNSDGGTKMSRKLIILLCVFGIVTLMLCFSVYYFWYRRKVRKDKVILDEEETLNTDLPTISLISIQRSTNYFSEASKLGEGGYGNVYKGILPDGRQIAVKRLSKTSEQGSDEFKNEVMLIAKLQHRNLVRLLARCSEEDEKILVYEYMPNGSLYSHLFDYQNKKQLDWKLRFNIIKGIARGLLYLHEDSRLKIIHRDLKASNILLDHEMNPKISDFGLARAFEIGQSQANTKRIMGTYGYIAPEYAILGLFSVKSDVFSFGVLILEIISGRKNNVFLLSDDDHDQALLLHAWNIWCGGNYLELMDPILEKSFIVNEVVRCIHIGLLCVQQDAADRPTMSTVVLMLGSDIMSLPKPNHPALSIGKMTPNKEIISRSPESIFVNYASTSTFLPR 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00165 615 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 196 584 - -
Pste1g00165 615 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Pste1g00165 615 Gene3D - 15 123 IPR038408 -
Pste1g00165 615 Gene3D - 128 220 IPR038408 -
Pste1g00165 615 Gene3D Transferase(Phosphotransferase) domain 1 371 575 - -
Pste1g00165 615 Pfam Protein kinase domain 296 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00165 615 SMART serkin_6 295 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00165 615 SUPERFAMILY Protein kinase-like (PK-like) 280 583 IPR011009 -
Pste1g00165 615 CDD STKc_IRAK 301 568 - -
Pste1g00165 615 ProSiteProfiles Gnk2-homologous domain profile. 14 123 IPR002902 -
Pste1g00165 615 Gene3D Phosphorylase Kinase; domain 1 258 370 - -
Pste1g00165 615 ProSiteProfiles Protein kinase domain profile. 295 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00165 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Pste1g00165 615 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 260 370 - -
Pste1g00165 615 Pfam Salt stress response/antifungal 28 120 IPR002902 -
Pste1g00165 615 Pfam Salt stress response/antifungal 158 216 IPR002902 -
Pste1g00165 615 FunFam cysteine-rich receptor-like protein kinase 10 371 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00165 Pste-Chr1 629612 640260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00165 1 614 Receptor kinase-like Gene Family AT4G05200 39.394 3.99e-157 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g00165 Pkinase 3.7e-46 CL0016