Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste1g00164 | ATGGAAAAGGATATGATCTGTGATGTTTCTCCATCATGGGATGGTGATAATGGCAACTCTACTGAGAAAAGGCTCAGGTTATTTGGCTTTGAGCTCAACCCTTCAAAAGAGGGCATTGCCAAAGAGTCTGGTGAAGGAGATGAAAGTGTGAATTCCTCTAACTCAGTCTCATCAGGAGGAGAGAAAACTGTGCAGGATAAAACCTCAGCTAAAGACCCTGAAGAGAGGAAGTTTGAGTGCCAATATTGTTACAAGGAATTTGCAAATTCACAAGCATTAGGAGGCCACCAAAATGCTCACAAAAAAGAAAGAATGAAGAAGAAGAGGTTGCAGCTTCAATCTATAAACCGTTACTTACAACACCCTTTCCCATCCAACCATGGATTTGCTTACCAAGCCTCTGATTCTCCTTGGTTCTATGATCCCTCTACCTACAACTCTGAGTTTACCCTTTCTGAAGAACCTCAGATTAGCTTCAATTCAAATGTTTTAGATAACAACTTTTCTCTTGATCAGAAATCTAGTTGGTATTCTATGGCATCAAACCCTCCTTCCCAACAAGATACTTGCATGTTTACTTTCTCAAGTGCAAATAATAATACCCCTTTCATCTTCAAGCCTTGCCACTTCCCTGCTTCAAACCAGAGCCATAGTAAAGCCCTAGATCTTCAACTAGGCCTCAACTTGCAGTCAAATACAAGAAGTTCTCTACGAAGGATGTAA | 723 | 0.4066 | MEKDMICDVSPSWDGDNGNSTEKRLRLFGFELNPSKEGIAKESGEGDESVNSSNSVSSGGEKTVQDKTSAKDPEERKFECQYCYKEFANSQALGGHQNAHKKERMKKKRLQLQSINRYLQHPFPSNHGFAYQASDSPWFYDPSTYNSEFTLSEEPQISFNSNVLDNNFSLDQKSSWYSMASNPPSQQDTCMFTFSSANNNTPFIFKPCHFPASNQSHSKALDLQLGLNLQSNTRSSLRRM | 240 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste1g00164 | 240 | MobiDBLite | consensus disorder prediction | 46 | 64 | - | - | |
Pste1g00164 | 240 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 80 | 100 | IPR013087 | - | |
Pste1g00164 | 240 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Pste1g00164 | 240 | SUPERFAMILY | beta-beta-alpha zinc fingers | 74 | 105 | IPR036236 | - | |
Pste1g00164 | 240 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 78 | 105 | IPR013087 | - | |
Pste1g00164 | 240 | Gene3D | Classic Zinc Finger | 52 | 126 | - | - | |
Pste1g00164 | 240 | Pfam | C2H2-type zinc finger | 78 | 103 | - | - | |
Pste1g00164 | 240 | PANTHER | ZINC FINGER PROTEIN 5 | 19 | 230 | IPR044299 | GO:0010090 | |
Pste1g00164 | 240 | MobiDBLite | consensus disorder prediction | 36 | 72 | - | - | |
Pste1g00164 | 240 | FunFam | zinc finger protein 5 | 52 | 128 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste1g00164 | Pste-Chr1 | 629540 | 630262 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste1g00164 | 20 | 152 | C2H2 Transcription Factor Family | AT1G68360 | 35.329 | 1.07e-16 | 75.1 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Pste1g00164 | zf-C2H2_6 | 6.5e-06 | CL0361 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pste1g00164 | 1 | 629540 | 630262 | Pste1g00164 | 1 | 629540 | 630262 | ECH |