Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00162 GCAACGTTAAATGTTTCTGGAACTGTGTCTGTCTCTTTCTCTCACACCCACTGCCAACTCCTATTGCTCACTCTCTCTAGTCTCTGCTCCACTTTGTGCTCTCCTCTCTGTCCATGCATTTCCCAACAGATCCCACTAAACAACTCCTTTTCTATCCTTACCCTCTTTTTGCTCTATAAAACTCTCACAAGCCTCATTTTGGAGAACACACTCCAGATATCCACCATACTTGCTATACGTCCACTCATTATCAGGATGGTCCCTGCAATAATGGTTTATTGATCACCAAAGTTGGAATATCATCCACCTTGTGGCATTCCAATGATTCTATTTCTCTTCTGAACTGACAACTTTGTCCCTGAATCTTGTCCTAATGGCCAAGAGTCCCTGTCTCTTTCGCTTTTTCCATGTCCTGGCAAAGCTGTTACTCATTTCCTACTCTATTCTCCCGCCTTGTGTGTCTATGACGTTGGAAACCAAAGCTCTTCTTCAGTTCAAGAGCCATTTGAAGGATACCTTGAATTCTTTGTCTTCGTGGAAAGAATCAGACTCTCCGTGTGAGTTTTATGGAATTACATGTGATAGAGTTTCTGGGAGAGTCACAGAAATCTCACTGGACAATAAGTCCCTCTCTGGTGACATTTTCTCATCACTCTCAGTTCTGCAGAGCATGCAAGTTCTGTCACTCCCATCTAATTTAATTTCTGGAAAGCTTCCATCAGAAATAAGCAGGTGTACGAACCTCAGAGTGTTGAATCTAACAGGAAATCAATTGATTGGAGAAATTCCAGATTTGTCTGGGCTGAGAAACCTGCAGGTTCTTGACCTTTCAGCAAACTACTTCTCTGGCAGCATCCCCAGGTGGGTAGGGAATCTAACTGGACTGGTTTCACTGGGTCTTGGGGAAAATGATTACAATGAGGGTGAGATTCCAGAGACACTTGGAAATCTGAATAACTTGACCTGGCTCTATCTTGGTGGCTCCCAGTTGATAGGAGAGATTCCAGAATCACTATATCAATTGAAGGCATTGGAGACACTAGATATTTCAAGAAACAAGATCTCCGGCAGACTCTCCCGATCAATTTCCAAGTTAGAGAATCTTTACAAGATTGAGCTCTTCTCCAATAACTTGACAGGAGAGGTTCCAGCTGAGCTTGCATACCTCACTAAGCTGCAGGAGATTGACCTTTCTGCAAACAATATGTATGGTAGATTGCCAGAGCACATTGGTAATATGAAGAAATTGGTTGTTTTTCAACTGTATGAAAACAACTTTTCTGGAGAACTTCCTGCTGGATTTGCAGATATGCATCATCTTGTCGGGTTTTCAATTTATAGAAACAGCTTCACTGGGACGATTCCAGAAAATTTTGGCCGCTATTCACCACTTGAAAGTATTGACATATCTGAGAATCAATTTTCAGGTGATTTCCCCAAGCACTTGTGTGAAAGCAGGAAGTTGAGATTTTTGCTTGCATTGCAAAACAATTTCTCTGGGACTTTTCCAGAGTCTTATGTTTCATGTAAATCTTTGGAGAGATTTAGGATCAGTATGAACCGCTTATCTGGGAAAATTCCAGATAAGGTTTGGGCACTTCCATATGTAAAAATAATTGATTTAGCCTATAATGATTTCACCGGTGTGGTACCTTCACAAGTTGGGTTGTCTACTAGCTTAAGTCAGATAGTTTTGACAAAGAACAGGTTTTCAGGCAAGCTCCCATCAGAGCTTGGCAAGCTGGAGAACTTGGAGAAGCTTTACTTTAGCAACAATAATTTCTCTGGTGAAATACCACCTGAAATTGGATCTTTGAAGCAGTTATCCTCGTTGCATCTAGAAGAGAATTCGTTAACTGGACCAATACCTGCAGAACTCGGTCACTGTGCAAGGCTGGTGGACTTGAATCTTGCTTGGAATTCTCTATCTGGAAATATCCCCCAGTCACTTTCACTTATGAACTCGTTGAACTGTCTTAACATATCTGGAAACAAACTTACAGGTTCTATTCCGGACAATTTAGAAACAATAAAGCTAAGCTCGGTGGATTTTTCTGAAAACCTGCTTTCTGGAAGAATTCCATCTGGTCTTTTTATTGTTGGGGGGAAGAAAGCTTTTCTTGGAAACAATGGTCTGTGTGTTGAGGGAAACCTAAAACCTTCCCTGAATTCTGATTTAAAGATTTGTGCCAAAAATCATGGTCAGCCTAGGGTCTCTGCTGATAAATTTGTCCTGCTCTTTTTTATTGCTTCCATTTTTGTCGTTATTTTAGCTGGGTTGCTGCTTTTGAGTTGTAGAAGCCTCAGGCACAGTGCAGAAAAAAACTTGCAAGGTCAAAAGGAAGTAGGTCAAAAATGGAAACTTGCATCTTTCCACCACGTAGATATCGATGCCGATGAAATATGTAATCTGGATGAAGACAATTTGATAGGTAGTGGTGGTACAGGAAAGGTTTATCGAGTGGAATTGAGGAAAAATGGAGCAATGGTGGCAGTGAAGCAACTAGGGAAAGTAGATGGTGTGAAAATTTTAGCTGCAGAAATGGAGATTTTGGGGAAAATTAGGCATAGAAATATACTTAAACTCTATGCTTCTTTACTTAAAGGAGGATCCAACCTTTTAGTTTTTGAGTACATGCCAAACGGTAATCTTTTTCAAGCTCTTCACAGACAGATAAAAGATGGGAAGCCAGACTTGGAGTGGAAGCAGAGGTATAAAATTGCTCTGGGAGCTGCAAAAGGAATTGCTTATTTACACCATGACTGTAATCCACCTATTATTCACAGGGATATAAAATCCAGCAACATTTTGCTTGATCAGGATTACGAGCCAAAAATTGCTGATTTTGGTATTGCAAGGTTTGCAGAAAAATCAGATAAGCAGTTGGGTTATAGCTGTCTAGCCGGCACACTTGGTTATATTGCTCCAGAACTTGCTTATGCCACTGACATCACTGAAAAGAGTGATGTCTATAGCTTTGGAGTGGTGCTATTAGAATTAGTGTCTGGAAGAGAACCCATTGAAGAGGAGTATGGAGAGGCGAAGGATATTGTTTATTGGGTTTTGAGTCATCTCAATGACCGTGAAAGTATTCTCAACATTCTTGATGAAAGGGTGACATCTGAGTCTGTTGAAGATATGATCAAAGTGTTGAAGATTGCTATTAAGTGCACCACTAAGCTTCCATCTTTGCGCCCCACCATGAGAGAGGTTGTTAAGATGCTAATTGACGCTGAGCCTTGCGCGTTGAAATCTCCAAAATGCCGCCTTGACAAAGACACAAAGGCCCTTCTTTAGTGGGTTTTCTTTCACAGCTAATGTAAATCCTTGAAAATTCCACTGAAATTATATATTTCCCTATTGAGAAGTACTTTCGTAACTTAGTCGACATCTATACGAAATATGATAATTATGTTA 3418 0.4055 MAKSPCLFRFFHVLAKLLLISYSILPPCVSMTLETKALLQFKSHLKDTLNSLSSWKESDSPCEFYGITCDRVSGRVTEISLDNKSLSGDIFSSLSVLQSMQVLSLPSNLISGKLPSEISRCTNLRVLNLTGNQLIGEIPDLSGLRNLQVLDLSANYFSGSIPRWVGNLTGLVSLGLGENDYNEGEIPETLGNLNNLTWLYLGGSQLIGEIPESLYQLKALETLDISRNKISGRLSRSISKLENLYKIELFSNNLTGEVPAELAYLTKLQEIDLSANNMYGRLPEHIGNMKKLVVFQLYENNFSGELPAGFADMHHLVGFSIYRNSFTGTIPENFGRYSPLESIDISENQFSGDFPKHLCESRKLRFLLALQNNFSGTFPESYVSCKSLERFRISMNRLSGKIPDKVWALPYVKIIDLAYNDFTGVVPSQVGLSTSLSQIVLTKNRFSGKLPSELGKLENLEKLYFSNNNFSGEIPPEIGSLKQLSSLHLEENSLTGPIPAELGHCARLVDLNLAWNSLSGNIPQSLSLMNSLNCLNISGNKLTGSIPDNLETIKLSSVDFSENLLSGRIPSGLFIVGGKKAFLGNNGLCVEGNLKPSLNSDLKICAKNHGQPRVSADKFVLLFFIASIFVVILAGLLLLSCRSLRHSAEKNLQGQKEVGQKWKLASFHHVDIDADEICNLDEDNLIGSGGTGKVYRVELRKNGAMVAVKQLGKVDGVKILAAEMEILGKIRHRNILKLYASLLKGGSNLLVFEYMPNGNLFQALHRQIKDGKPDLEWKQRYKIALGAAKGIAYLHHDCNPPIIHRDIKSSNILLDQDYEPKIADFGIARFAEKSDKQLGYSCLAGTLGYIAPELAYATDITEKSDVYSFGVVLLELVSGREPIEEEYGEAKDIVYWVLSHLNDRESILNILDERVTSESVEDMIKVLKIAIKCTTKLPSLRPTMREVVKMLIDAEPCALKSPKCRLDKDTKALL 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00162 974 FunFam Receptor-like protein kinase HSL1 291 597 - -
Pste1g00162 974 Gene3D Ribonuclease Inhibitor 183 241 IPR032675 -
Pste1g00162 974 Gene3D Ribonuclease Inhibitor 242 312 IPR032675 -
Pste1g00162 974 Pfam Leucine Rich repeats (2 copies) 122 161 IPR025875 -
Pste1g00162 974 Gene3D Phosphorylase Kinase; domain 1 662 754 - -
Pste1g00162 974 SUPERFAMILY RNI-like 282 572 - -
Pste1g00162 974 FunFam Leucine-rich receptor-like protein kinase family protein 670 754 - -
Pste1g00162 974 ProSitePatterns Protein kinases ATP-binding region signature. 686 709 IPR017441 GO:0005524
Pste1g00162 974 ProSiteProfiles Leucine-rich repeat profile. 123 145 IPR001611 GO:0005515
Pste1g00162 974 SUPERFAMILY L domain-like 58 352 - -
Pste1g00162 974 Pfam Leucine Rich Repeat 220 241 IPR001611 GO:0005515
Pste1g00162 974 Pfam Leucine Rich Repeat 459 481 IPR001611 GO:0005515
Pste1g00162 974 SMART LRR_typ_2 97 121 IPR003591 -
Pste1g00162 974 SMART LRR_typ_2 217 241 IPR003591 -
Pste1g00162 974 SMART LRR_typ_2 144 168 IPR003591 -
Pste1g00162 974 SMART LRR_typ_2 457 480 IPR003591 -
Pste1g00162 974 SMART LRR_typ_2 481 505 IPR003591 -
Pste1g00162 974 SMART LRR_typ_2 265 289 IPR003591 -
Pste1g00162 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672|GO:0006468
Pste1g00162 974 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 280 952 - -
Pste1g00162 974 ProSiteProfiles Protein kinase domain profile. 680 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00162 974 FunFam Probable inactive receptor kinase RLK902 31 188 - -
Pste1g00162 974 FunFam leucine-rich repeat receptor-like protein kinase TDR 755 962 - -
Pste1g00162 974 Pfam Leucine rich repeat N-terminal domain 34 70 IPR013210 -
Pste1g00162 974 Gene3D Ribonuclease Inhibitor 31 182 IPR032675 -
Pste1g00162 974 CDD STKc_IRAK 686 951 - -
Pste1g00162 974 SUPERFAMILY Protein kinase-like (PK-like) 677 951 IPR011009 -
Pste1g00162 974 Gene3D Transferase(Phosphotransferase) domain 1 755 963 - -
Pste1g00162 974 Pfam Protein kinase domain 682 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00162 974 Gene3D Ribonuclease Inhibitor 313 597 IPR032675 -
Pste1g00162 974 SMART serkin_6 680 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00162 Pste-Chr1 627888 632254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00162 1 961 Receptor kinase-like Gene Family AT1G72180 56.160 0.0 1038
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste1g00162 Pkinase 8e-50 CL0016