Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00161 ATCAGAACTGAGCTATGCCGATTCAGTGGTGCCAAGATCTACCCTGGAAAAGGCATCAGATTTGTTCGTGGTGATTCTCAGGTCTTCCTCTTTGCAAACTCTAAATGTAAGAGGTATTTCCACAACCGCTTGAAGCCGTCAAAACTCACCTGGACTGCAATGTACAGAAAGCAACACAAGAAGGACATTGCACAAGAAGCTGTGAAGAAGAGGCGTCGTGCTGCTAAAAAGCCTTATTCTAGGTCCATTGTGGGTGCCACTTTGGAAGTGATACAGAAAAAGAGAACTGAGAAGCCAGAAGTTCGAGATGCTGCTAGGGAAGCTGCTCTACGTGAAATTAAAGAGAGGATCAAGAAAACAAAGGATGAGAAGAAGGCAAAGAAAGCAGAAGTTGCAGCCAAGTCGCAAAAATCACAAGGGAAAGGAAATGTTTCAAAGGCTGCTATGCCTAAAGGTCCCAAACTTGGTGGTGGTGGCGGGAAACGCTGAGTTTAGTTTAGTTCTTAATTTTGGCAACCATTTTTGCATGTTTAATCATTTATTTTACTACTTTATTAAACCTGTGTTTGGTCGCATGAATTTGAACCCACAAAAGGTTAGACCAAGGGTTGTCGTCCTACAAACATAATTTGATGCTTGAATTTATTGACTATGTTTTTCTGTTGAAACCAGTTATGATATTTTAACACTACTAGTTATCCACGACATCAAGTGTGTAACACCTGTCTTTTATGTTTTATTAATTGACCTGATTGCATCAATTATAGGTGGAAATTCCTTACTTTCTAATTACGTGT 797 0.399 IRTELCRFSGAKIYPGKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRAAKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVAAKSQKSQGKGNVSKAAMPKGPKLGGGGGKR 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00161 162 Pfam Ribosomal protein L24e 2 65 IPR000988 -
Pste1g00161 162 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Pste1g00161 162 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Pste1g00161 162 Gene3D Ribosomal protein L24e 1 62 IPR038630 -
Pste1g00161 162 Coils Coil 110 137 - -
Pste1g00161 162 FunFam 60S ribosomal protein L24 1 62 - -
Pste1g00161 162 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
Pste1g00161 162 MobiDBLite consensus disorder prediction 115 134 - -
Pste1g00161 162 PANTHER 60S RIBOSOMAL PROTEIN L24 2 154 IPR000988 -
Pste1g00161 162 MobiDBLite consensus disorder prediction 115 162 - -
Pste1g00161 162 SMART 4TRASH 6 44 IPR011017 -
Pste1g00161 162 Gene3D - 67 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00161 Pste-Chr1 627208 628815 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00161 1 155 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 83.871 2.86e-85 246