Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00151 ATGAGAGCCCTTGCATTAGGGAATGAAACTGATTATTTGGCTCTTCTCAAATTCAGAAAATCCATATCTATTGACCCATATGAAATCTTCCTTTCTTGGAACACTTCCACTCACTTTTGTAATTGGTATGGAATCACATGTAATCACATGCATAAAAGAGTTACAGACTTAAATTTGGAAGGATCCATGTTGAAGGGATCCATATCTCCTTATGCGGGTAATCTCTCTTATATGAGAAACCTCAACCTCGCAAACAACGGCTTCCATGGGAACATTCCACAAGAATTGGGACAGTTATCAAAACTGCAAAACCTTTTTGTCGCAAACAACTCATTGATGGGGGAAATTCCTACAAACTTGTCCAGTTGTGTAGATCTCCAAAGCTTAGAATTATATGGGAACAATTTGATCGGAAAAATACCAAGTGAAATTAATTCACTTCAGAATCTTCAATATTTGTACCTTGGTGGAAACCAGTTGACCGGAAGAATCCCATCATTCATAGGAAATCTTTCATTCCTAATTGTTCTTTCAATGGGTTATAACAAGCTAAATAAAGATATTCCACCAGAAATATGTCATCTCAAAAGCTTGAAATTGATAGCATTCCATGTCAACAATCTAAGTGGTAAGTTTCCTTCTTGTCTTTATAATATGTCATCTCTTGTAACAATCTCAGCTTCAGCAAATCACTTTAAGGGTTCTCTTCCTCCTGACATGTTCAACACCCTTCCTAATCTCCAAAATTTTTACATTTCTGGAAATTATCAAATCTTAGGTCCAATCCCACCTTCCATCACTAATGCATCTGTCCTTTCAAGACTCAGCATTGAATCAAACCATTTCATAGGACAAGTTCCAAGTTTAGCAAAGCTACAAAATATTCAATTTTTAGCTTTGTCTGCAAACAATCTAGGTGGCAATTCAACTAATGATTTAGATTTTCTAAAATCATTAGTAAACTGTAGTAAGATCTTTAAAATTTCCTCACTAACAAACTTGTTGGATTTGGCACAAAACACATTGAGTGGTAGTATTCCAAAAGAAGTTGGCAACCTAAAAACGCTTGATTGGCTAGACATATCTAAGAATCATTTGTCTGGTGACATTCCTGGAACTATTGGAGCATGCATAATGTTGAAGTACCTTTATTTGCAAGAGAATTATTTACAAGGAAGCATACCATCCTCATTGGCATTCCTTAAAAGTCTTCAACGGTTAGATTTGTCACAAAATCATTTGTCTGGATTAATTCCTAATGTTCTGCAGAACAATTCTTTCTTGGAATATTTCAATGTGTCTTTTAATATGTTGGATGGTGAGGTGCCAACTGAAGGTGTCTTTGGAAATGCAAGTGAGTTAGTGGTGTTTGGAAATAGTAAGCTTTGTGGAGGTATTTCGAAACTACAACTACCACCATGCCCTGTCAAAGGTAAGAAACATGCAAAACACCACAAGTTCAGGATGATAACAGTGATAGTTTTTGTGATTGGCTTCTTTCTCATATTGTCAATTATTCTAACTATCTACTGGATGAAGAAAAGGAGTAAGAAACCATATTTGGATTCACCAACAATTGACCAACTAGCTAAAGTTTCATACCAAAGCTTACACAATGGAACTAATGGGTTCTCAGATGCAAATTTGATAGGATCTGGAAGTTTTAGTTCTGTCTACAAAGGAACTCTTGAGTTAGAAGACAAATTTGTTGCCATCAAAGTCCTTAACCTTAAAAAAAAGGGTGCTCACAAAAGTTTCATTGCTGAATGCAATGCACTTAAAAATATTAAACATCGAAATCTGGTTCAGATTTTGACGTGTTGTTCCAGCACAGATTACAAAGGTCAAGAATTTAAAGCTCTAATTTTTGAGTACATGAAAAATGGAAGCTTAGAGCAATGGCTACATCCGATGACATTAAGTGCAGAGCATCCAAGAACATTGAACTTTAATCAAAGATTAAATATCATAATTGATATTGCTTCTGCATTGTATTATCTTCATCAAGAATGTGAACAATCGATTGTTCATTGTGATTTAAAGCCAACTAATGTCCTTCTTGATGATGACATGATTGCTCATGTAAGTGATTTTGGTATAGCTCGACTTCTCTCAACAATTAATACTACTGCCTCTATGCAAACAAGTACAATTGGAATAAAGGGTACTGTTGGTTATGCTCCTCCAGAGTATGGAATGGGTTTTGAAGTGTCTATAAATGGCGACGTATATAGTTTTGGAATTCTTATGTTGGAGATACTTACTGGGAGAAGACCCACCGATGAAATCTTTGTAGATGGTCAAAATTTACATAAATTTGTGGAAAATTTCTTTCCTGATAATATTTTACAAATTGTGGACCCATCACTTGTACCAAGACAAGGGCAAGCAACAATAGAAGAAGAAAACAATCAAAATCTTACTCCAACTATTCAAAAGTGTTTAGTTTTACTCTTTAAGATTGGACTTGCTTGTTCAGTGGAATCATCAAAAGAAAGAATGAACATGGTGGATGTGACTACAGAGCTAAGCAAAATAAAAAAAGCATTACCTGGTATTGAAACTTGAATAATCAAAGTTGCGATCAAATTTCGATCATAGCTACTTCAGAAACTGACTTGTGTGTACTTTAGTAGAGTTTATCCCTAGGGTTTATAACTATTTAATAATTTTACCCCACTTAGGTACTCATATGAATGCATCAATACACCCTTCAAATAATATATGCCATATGCTTAATAAAGGTAATGGTGTTTCTAAGTACTCAATTTTGTCCGATCTTTTTATTAATATATGACTTTTTTTTTTTTGCATTTGGATTAAGTTTGTTGTAGTCTATTTTCTTAGATTTATTATT 2857 0.3437 MRALALGNETDYLALLKFRKSISIDPYEIFLSWNTSTHFCNWYGITCNHMHKRVTDLNLEGSMLKGSISPYAGNLSYMRNLNLANNGFHGNIPQELGQLSKLQNLFVANNSLMGEIPTNLSSCVDLQSLELYGNNLIGKIPSEINSLQNLQYLYLGGNQLTGRIPSFIGNLSFLIVLSMGYNKLNKDIPPEICHLKSLKLIAFHVNNLSGKFPSCLYNMSSLVTISASANHFKGSLPPDMFNTLPNLQNFYISGNYQILGPIPPSITNASVLSRLSIESNHFIGQVPSLAKLQNIQFLALSANNLGGNSTNDLDFLKSLVNCSKIFKISSLTNLLDLAQNTLSGSIPKEVGNLKTLDWLDISKNHLSGDIPGTIGACIMLKYLYLQENYLQGSIPSSLAFLKSLQRLDLSQNHLSGLIPNVLQNNSFLEYFNVSFNMLDGEVPTEGVFGNASELVVFGNSKLCGGISKLQLPPCPVKGKKHAKHHKFRMITVIVFVIGFFLILSIILTIYWMKKRSKKPYLDSPTIDQLAKVSYQSLHNGTNGFSDANLIGSGSFSSVYKGTLELEDKFVAIKVLNLKKKGAHKSFIAECNALKNIKHRNLVQILTCCSSTDYKGQEFKALIFEYMKNGSLEQWLHPMTLSAEHPRTLNFNQRLNIIIDIASALYYLHQECEQSIVHCDLKPTNVLLDDDMIAHVSDFGIARLLSTINTTASMQTSTIGIKGTVGYAPPEYGMGFEVSINGDVYSFGILMLEILTGRRPTDEIFVDGQNLHKFVENFFPDNILQIVDPSLVPRQGQATIEEENNQNLTPTIQKCLVLLFKIGLACSVESSKERMNMVDVTTELSKIKKALPGIET 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00151 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 675 687 IPR008271 GO:0004672|GO:0006468
Pste1g00151 855 FunFam LRR receptor-like serine/threonine-protein kinase EFR 515 625 - -
Pste1g00151 855 ProSitePatterns Protein kinases ATP-binding region signature. 550 573 IPR017441 GO:0005524
Pste1g00151 855 SUPERFAMILY L domain-like 229 464 - -
Pste1g00151 855 Gene3D Transferase(Phosphotransferase) domain 1 626 851 - -
Pste1g00151 855 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 47 317 - -
Pste1g00151 855 ProSiteProfiles Protein kinase domain profile. 544 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00151 855 SMART LRR_typ_2 147 170 IPR003591 -
Pste1g00151 855 SMART LRR_typ_2 219 243 IPR003591 -
Pste1g00151 855 SMART LRR_typ_2 401 424 IPR003591 -
Pste1g00151 855 SMART LRR_typ_2 171 195 IPR003591 -
Pste1g00151 855 SMART LRR_typ_2 99 123 IPR003591 -
Pste1g00151 855 Pfam Leucine rich repeat 380 438 IPR001611 GO:0005515
Pste1g00151 855 Pfam Leucine rich repeat N-terminal domain 9 48 IPR013210 -
Pste1g00151 855 Gene3D Ribonuclease Inhibitor 8 167 IPR032675 -
Pste1g00151 855 Pfam Protein kinase domain 546 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00151 855 SUPERFAMILY L domain-like 8 305 - -
Pste1g00151 855 PANTHER OS04G0122200 PROTEIN 327 848 - -
Pste1g00151 855 SMART serkin_6 544 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00151 855 Gene3D Phosphorylase Kinase; domain 1 525 625 - -
Pste1g00151 855 Gene3D Ribonuclease Inhibitor 174 483 IPR032675 -
Pste1g00151 855 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 626 854 - -
Pste1g00151 855 Pfam Leucine Rich Repeat 149 171 IPR001611 GO:0005515
Pste1g00151 855 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 318 477 - -
Pste1g00151 855 SUPERFAMILY Protein kinase-like (PK-like) 518 843 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00151 Pste-Chr1 590533 594266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00151 8 848 Receptor kinase-like Gene Family AT3G47570 38.191 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pste1g00151 Pkinase 9.1e-40 CL0016