Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00148 GCAGAAGCAGCAGCAGAAGGTGCTGAGAAATGGGAAAGATGTCTAGTTGTTTGTGTTCTGATTCAAGCTGAAGCTCAACCAGGATTCATCAGCATAGATTGCGGAGCTCCCGCAGGTGTTAACTATTCTGACATTTATACAAGCATAAGTTATATATCAGACACAAATTTCATAAATACTGGTGTGAGTAAGACAATAGCATCTGAACTAAGAAGTAATCGACAACAATATTTTTTGAGGCTTAGAAGCTTCCCAGAAGAAAAAGAAACTTACCTCATTCGAGTTAGTTTTTTGTATGGAAATTATGATGGTCAAAATATCTTACCACAATTTGATCTTCTTCTTGGAGCTAATCTGTGGGATAGAGTGAATATATATAATGCATCCCAAGACCAATTCAAGGAAATCATATATGTACCTTCACTGGATTACATACAAATTTGTCTAGTCAACACAGACACAGGGACACCATTTATATCATATATAGAATTGAGGACTTTGAAAAATGATACATATGTCACTGAATTAGGATCATTGGAATATTACTGGCGATGTGATTTAGGTTCAAATTATGAATCCTACAGGTACAACTATGATGTTCATGATCGTTTTTGGTATTCCTGTAACTTAAATGAGGATTTGATACAATTAAATGTTTCAAATACTGATGATTCTTTAGAAACCCTAGTTAAACCAACAAATGCTAGTGCTCCATTGAAAATAAGTTGGGAGCCAAAAGAATCAACTTGGCAATTTTATGCTTACTTACACTTTATGGAGATTGAAGTGTTAACACCCAGTCAAAAAAGAGAATTCAACATCATACGCAATGGTGAATTAAGCACATCATCCTTTGGTGGGAAAGAAATTAAATATTTACTTGAGATGACAAAAAATTCAACCCTACCTCCCATCATCAGTGCCTTTGAAATTTACAAAGTCAAAGAGTTTCCACAATCAGATATATTCCAAGTAGATGTTGAGGCTATTACAACTATGAAGTCAATTTATGGATTGACAAGAGATTGGCAAGGGGATCCATGTAGTCCAAAAGATTACGTATGGGATGGTTTGAATTGTACTTATGTCGAAAGTGATTCTCCAAGAATCATAACTTTGAATTTATCTTCAAGTGGATTGTCAAGAAAGATAGATCCTTTAATTTCAAATTTGACAATGTTGGAGAAGTTGGATTTATCAAACAATAACTTAAATGGTGAAATTCCTGAATTTTTGTCTCAACTACTACACTTGAAAATCTTAAATTTGGAGAAGAATAACCTCTCTGGTACAATTCCATCAACACTTAGAAAAGGTTCCTTATCATTAAGTCAATGCAACAACACCGAAAATCCAAAGGAAGAGGGAAAGAAAAAGAACATTGTTATACCTTTAGCAACATCAATTAGTGGGGTTGTGATCATTCTAGTGATTGTGGCAGCTATATTGTGGACTATTAAAAGGACAAACTTGAATAAAGATTTGGTGGCAGAGAAGGGTCAAAGACATATCTCATCACAATACATAGAACGAGATGATTTATCACTGCAATCCAAAAAGCAAATATATTCATACTTCGATGTTCTTAAAATCACCAACAATTTCAATACAGTCATTGGTAAAGGAGGATTTGGAATGGTTTATCTAGGTTATATCAATGACACTCCAGTTGCAGTGAAAAATCTTTCCCCATCATCAGTTCAAGGTTATCAACAATTTCAAGCAGAGGTTAAACTTCTAATGAGAGTTCATCATAAAAATTTGACCTCCCTTGTTGGCTACTGCAATGAAGAAAGTAATAAGAGTCTCATATATGAGTATATGGCTAATGGAAACTTACAAGAACATCTCTTAGGTAAACATAGCAAAACAAAATTCTTTAGCTGGGAAGATAGACTTCATATAGCAGTAGATGCAATCTTAGGATTGGAGTATCTACAAAACGGTTGTAAGCCGCCTATTATTCATAGAGACATAAAATCTACAAACATCTTATTGGATGAACACTTCCTAGCAAAACTATCTGAGTTTGGTCTATCTAAAATTATTCCTATAGATGGGGAACACATGTACTATAAAACCAACAGATTAACAGAGAAAAGTGATATTTATAGTTTTGGTGTTGTTCTTTTGGAGATAATCACAAGTCAACAAGTAATGATGAAGAATCAACAAATGACTCACATAAGTCAATGGGTAAGCTCATTCGTTGCAAACGGCGATATCAAGTCTATTATTGATCCAAGGTTAGAAGGAGATTTTGATAATAACTCCGTTTGGAAAGCAGTAGAAATAACAATGACATGTGTATCTCCAAACCCCAATAAAAGGCCAATCATAAGTATGATAGTAAGTGAATTAAAGGAATCATTAGCCATGGAAATAGCTAGAATTAAAGGTGCTCATTCAAGAGATTCAATTAATCCGATCACCATAAATCTAAATACCGAATTTATTCCCCTGGCCAGATAATTCCTTGCCCTTGATAGGATGAATATAATCTTATAGTGAGATGTGATTAAATATTTAGATAAGTAGGGTGAGTGATTTTCTTTTTGAAATGCTAGAATGAAATCAAGCTACACAAGTGAAAGTGATGTCTCACAAGTATTGAATATGTATAAAATAAATTATGAGCAATAAATGTATGGTTATTTATCATTCGA 2666 0.3368 AEAAAEGAEKWERCLVVCVLIQAEAQPGFISIDCGAPAGVNYSDIYTSISYISDTNFINTGVSKTIASELRSNRQQYFLRLRSFPEEKETYLIRVSFLYGNYDGQNILPQFDLLLGANLWDRVNIYNASQDQFKEIIYVPSLDYIQICLVNTDTGTPFISYIELRTLKNDTYVTELGSLEYYWRCDLGSNYESYRYNYDVHDRFWYSCNLNEDLIQLNVSNTDDSLETLVKPTNASAPLKISWEPKESTWQFYAYLHFMEIEVLTPSQKREFNIIRNGELSTSSFGGKEIKYLLEMTKNSTLPPIISAFEIYKVKEFPQSDIFQVDVEAITTMKSIYGLTRDWQGDPCSPKDYVWDGLNCTYVESDSPRIITLNLSSSGLSRKIDPLISNLTMLEKLDLSNNNLNGEIPEFLSQLLHLKILNLEKNNLSGTIPSTLRKGSLSLSQCNNTENPKEEGKKKNIVIPLATSISGVVIILVIVAAILWTIKRTNLNKDLVAEKGQRHISSQYIERDDLSLQSKKQIYSYFDVLKITNNFNTVIGKGGFGMVYLGYINDTPVAVKNLSPSSVQGYQQFQAEVKLLMRVHHKNLTSLVGYCNEESNKSLIYEYMANGNLQEHLLGKHSKTKFFSWEDRLHIAVDAILGLEYLQNGCKPPIIHRDIKSTNILLDEHFLAKLSEFGLSKIIPIDGEHMYYKTNRLTEKSDIYSFGVVLLEIITSQQVMMKNQQMTHISQWVSSFVANGDIKSIIDPRLEGDFDNNSVWKAVEITMTCVSPNPNKRPIISMIVSELKESLAMEIARIKGAHSRDSINPITINLNTEFIPLAR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00148 823 ProSiteProfiles Protein kinase domain profile. 533 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00148 823 FunFam Leucine-rich repeat receptor-like kinase 325 453 - -
Pste1g00148 823 PANTHER OS07G0107800 PROTEIN-RELATED 30 791 - -
Pste1g00148 823 SUPERFAMILY L domain-like 330 453 - -
Pste1g00148 823 ProSiteProfiles Leucine-rich repeat profile. 393 415 IPR001611 GO:0005515
Pste1g00148 823 SUPERFAMILY Protein kinase-like (PK-like) 517 786 IPR011009 -
Pste1g00148 823 ProSitePatterns Protein kinases ATP-binding region signature. 539 560 IPR017441 GO:0005524
Pste1g00148 823 Pfam Malectin-like domain 32 314 IPR024788 -
Pste1g00148 823 Gene3D Transferase(Phosphotransferase) domain 1 608 803 - -
Pste1g00148 823 Gene3D Phosphorylase Kinase; domain 1 515 607 - -
Pste1g00148 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Pste1g00148 823 FunFam Leucine-rich repeat receptor-like protein kinase 511 607 - -
Pste1g00148 823 Gene3D Ribonuclease Inhibitor 327 452 IPR032675 -
Pste1g00148 823 SMART serkin_6 533 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00148 823 Pfam Protein tyrosine and serine/threonine kinase 535 787 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00148 Pste-Chr1 577539 585614 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00148 14 823 Receptor kinase-like Gene Family AT1G51800 44.847 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pste1g00148 Malectin_like 1.1e-73 CL0202