Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00146 CTCAGCAGCAGCTTGAAGGGTCCATGGTCCACTTTCTGGATCTCACCCTCACCGTCACCGCCATACCTTCTTTCCAATGCTCCTTCGTTCTTTCTCCTTCCCCGTCACTCACCCGCGCGGGAAGATAACACTCCCTCCCCTCCCCTTTCCTTTCCATCTCCATTATTCTCCCTCAGACTCTTCTATCTCTCTGTAACCCCTGTTTTAGGGTTTTTCCCTTCCAAGCGGGTCACGATGCCGGGGCACCGCTCCAAGTCCGAGAAGCACGACGGCGGCGACAAGCAGCTCCGGCGGGACCCGTACGAGGTCCTCGGCGTCTCGCGAAACTCCACCGATCAAGAAATCAAATCCGCCTACCGCAAAATGGCGCTCAAATACCACCCAGACAAGAATGCTAACGATCCTAAAGCAGCCGATATGTTTAAAGAGGTTACCTTTTCTTATAATATCCTGTCAGATCCTGACAAACGTCGTCAGTATGACTCAGCTGGCTTTGAGGCTGTTGAATCAGAAAACCAAGAGTTGGAGTTAGATCTTTCAAGTTTGGGTGCTGTCAATACTATGTTTGCAGCACTTTTTAGTAAACTTGGTGTGCCAATTAAGACAACTGTATCTGCAACTGTTTTGGAAGAGGCACTCAATGGTATAGTGACCATTCGTCCACTTCCATTGGGCCATTATATATCTAAAAGGGTTGAGAAGCAATGTGCACACTTCTATTCAGTTACAATAACAGAAGAGGAAGCACGAGCTGGATTTGTTTGTCGAGTACAATCGACAGACAAAAGTAAATTCAAGTTACTATATTTCGATCAGGAAGACAATGGTGGTTTAAGTCTTGCACTCCAGGAAGACTGTGCAAAAACAGGGAAGGTTACCTCAGCTGGGATGTATTTTCTTGGGTTTCCTGTTTATCGGTTGGATCAAACAATGAACTCGATAGCTGCTGCTAAGGACCCTGATACATCATTTTTCAGAAAGCTAGATGGGTTTCAGCCCTGTGAATTAACAGAATTGAAGCCTGGTACACATGTATTTGCTGTTTATGGTGACAACTTTTTCAAAAGTGCAAACTATACCATAGAAGCTCTGTGTGCTGCACCTTTTAGTGAAGAAAAAGAAAATTTAAGAAATATAGAAGCTCAAATTTTGTCTAAAAGAGCAGAAATATCAAAGTTTGAAGCAGAATATCGAGAGGTTTTGTCACAATTCTCGGAGATGACAAGCAGATATGCACATGAAATGCAAGCAATTGATGAGCTTCTGAAGAATAGAAATGAGATACATGCATCATACACCAGTGCTCCTTTAAAACGGAGTACAAGTAAGAGCAGAAGTAAAAATTCTTCCAAGGAGGCAAAGGAAGATGGCCAATCAAGGGAGAAGAAGAGTACGAGAGATCGGCCAAAGAAGAAGAAATGGTATAACCTCCACTTAAAAGTTGATAAGAGAAAGGCTTGCTGAGGTGAGAATTGGAGAATTTAGAAGTTCGTGTCCCTCGTGTATTGATAGGTAATGAATTATTTTATCATTTGGTTGCCAACTCTGAAATCCACGGTAAAACTATAATCACTTGATCTGCACCCTTATGATTGTTTAGCACTTGTGCAAGAGGAAGAAGGATTTGCCAAAGCAACGACCAAATGCCATTGGAAGGTTTCGTTTGTCTGTCACTCAAGCGTGTCAAGGATGACAACCACTCATTGTTTATGTATAATTCCTTCCCCCCTTTTTATTTTGTCCCTCAGTAGCTCATCTTAAAAATTCGTACTTGTAAATTGTTTGATTTATTGATGAAGCATGATTAACTCTCTGCGCGGGTTGTAATTGTGTTTACAAGTAATGGCAAAGTATTGGAGGATAGGGTCAGGTATTTTGTTGCTTCATATATCTGGAATCGGGTTTAAGTCTAACTGTTACAGCATACTGTTTAACTTTTTACTTTAGTTTTTGTCCCTGCTATCTTCAATTCGCATAATGAATCATCATCTCGAACATTTAAGATAGGC 2009 0.4196 LSSSLKGPWSTFWISPSPSPPYLLSNAPSFFLLPRHSPAREDNTPSPPLSFPSPLFSLRLFYLSVTPVLGFFPSKRVTMPGHRSKSEKHDGGDKQLRRDPYEVLGVSRNSTDQEIKSAYRKMALKYHPDKNANDPKAADMFKEVTFSYNILSDPDKRRQYDSAGFEAVESENQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGIVTIRPLPLGHYISKRVEKQCAHFYSVTITEEEARAGFVCRVQSTDKSKFKLLYFDQEDNGGLSLALQEDCAKTGKVTSAGMYFLGFPVYRLDQTMNSIAAAKDPDTSFFRKLDGFQPCELTELKPGTHVFAVYGDNFFKSANYTIEALCAAPFSEEKENLRNIEAQILSKRAEISKFEAEYREVLSQFSEMTSRYAHEMQAIDELLKNRNEIHASYTSAPLKRSTSKSRSKNSSKEAKEDGQSREKKSTRDRPKKKKWYNLHLKVDKRKAC 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00146 487 SMART dnaj_3 98 156 IPR001623 -
Pste1g00146 487 ProSitePatterns Nt-dnaJ domain signature. 141 160 IPR018253 -
Pste1g00146 487 Coils Coil 369 396 - -
Pste1g00146 487 MobiDBLite consensus disorder prediction 78 99 - -
Pste1g00146 487 PRINTS DnaJ domain signature 119 134 IPR001623 -
Pste1g00146 487 PRINTS DnaJ domain signature 156 175 IPR001623 -
Pste1g00146 487 PRINTS DnaJ domain signature 136 156 IPR001623 -
Pste1g00146 487 PRINTS DnaJ domain signature 101 119 IPR001623 -
Pste1g00146 487 ProSiteProfiles dnaJ domain profile. 99 164 IPR001623 -
Pste1g00146 487 Gene3D DnaJ domain 83 183 IPR036869 -
Pste1g00146 487 MobiDBLite consensus disorder prediction 432 487 - -
Pste1g00146 487 FunFam Chaperone protein dnaJ 16 82 181 - -
Pste1g00146 487 SUPERFAMILY Chaperone J-domain 98 168 IPR036869 -
Pste1g00146 487 MobiDBLite consensus disorder prediction 465 479 - -
Pste1g00146 487 MobiDBLite consensus disorder prediction 445 464 - -
Pste1g00146 487 Pfam DnaJ domain 99 161 IPR001623 -
Pste1g00146 487 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 83 486 - -
Pste1g00146 487 MobiDBLite consensus disorder prediction 80 99 - -
Pste1g00146 487 CDD DnaJ 99 153 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00146 Pste-Chr1 570351 575184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00146 97 162 C2H2 Transcription Factor Family AT1G74250 43.662 8.57e-11 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00146 1 570351 575184 Pste1g00146 1 570351 575184 ECH