Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00134 GCACAGAGACAAGATGGGGTTTCCGGTGGGGTACACAGAATTGGTGGTGCCGAAGGTGTTTATGCAGGTGCTATCCCTATTGGGCTTCATCAGAAAAGTGGTCACCTTTCTCCTCTGTTACATGGGATTTCAGGATTTCCTGGAGGCCGAGGTTGCGTGGGGGGAGAGGCCGCCGGAATTGCAGTCCGTGTCGGCGCTGCTGATCCGCGAAGTGCTGCCGGTGGTGAAGTTCTCGGAGGTGGCCGTGGCCGTGGCGGACCCGCCGGAGAGCTGCGCGGTCTGTCTGTATGAGTTCGAGGGAGAGGACGAGATCAGACGCCTCACAAACTGCCGGCACATATTCCACAGAGGATGTCTGGACCGTTGGATGGGGTACGATCAGAGAACGTGTCCCCTGTGTCGGACACCCTTCATTCCTCACCATATGCAAGCTGCTTTCAATGATAGATTATGGGCAGCTTCGGGGATTCCCGATTTCTATTACCATGATGAATTTGCAATCATTGAACAAGAGTTGATTTGGATTGTGTTTGATTGGAGTAGATTCATGTGTTGGGATACCAGATTCAGCAAAATGGAAGAAGGGCGTAGTGCTAGCCTA 601 0.5308 MGFPVGYTELVVPKVFMQVLSLLGFIRKVVTFLLCYMGFQDFLEAEVAWGERPPELQSVSALLIREVLPVVKFSEVAVAVADPPESCAVCLYEFEGEDEIRRLTNCRHIFHRGCLDRWMGYDQRTCPLCRTPFIPHHMQAAFNDRLWAASGIPDFYYHDEFAIIEQELIWIVFDWSRFMCWDTRFSKMEEGRSASL 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00134 196 CDD RING-H2_RHA1-like 87 133 - -
Pste1g00134 196 SMART ring_2 87 129 IPR001841 -
Pste1g00134 196 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 135 IPR013083 -
Pste1g00134 196 ProSiteProfiles Zinc finger RING-type profile. 87 130 IPR001841 -
Pste1g00134 196 Pfam Ring finger domain 86 130 IPR001841 -
Pste1g00134 196 PANTHER RING ZINC FINGER PROTEIN-RELATED 21 150 - -
Pste1g00134 196 SUPERFAMILY RING/U-box 86 136 - -
Pste1g00134 196 FunFam RING-H2 finger protein ATL73 64 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00134 Pste-Chr1 530565 531430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00134 1 151 C3H Transcription Factor Family AT1G63840 57.325 3.07e-60 184