Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00132 ATGGGCTGAAAACCGGAAAAAAAAGGTCCTTAAAGAGATGGAGTTTGGTTAGGAAAAAAAGAAGATGAGGGGCAGTGAGAGAGCAAGTAAAGCAGTGGAGGAGAGCTGAGCTGAGTGGAGTTGAAATGGGAGAAAATGATAGAAAGGCTGGACAGGAAGTGAGTAGAGATGAGGCGAAAGAGACAGTTAAGAAGGAGAGAAAAGGCATCGAAGAGCTGAAAAAGTTGGTGAGGGAAAAAGAAGGAGAGGAGGTTTGGTTGTGGGGCGTGCCTCTATTTAAGGATGACAGAACCGACGTTATTCTTCTCAAGTTTCTCAGAGCTCGGGAGTTGAAAGTGAAGGAGGCTCTTGTGATGATTCAGAACACCCTTCGATGGAGAAAGGAGTTCAACATGGATGCTGTTTTGGAGGAAGATCTTGGCGACGAACTGGACAAGGTGTTTTTCATGCACGGACATACCAGAGAGGGCCATCCTGTCTGTTACAACGTGTACGGTGAGCTCCACAAGTATCCAAACACCGAGCATAAGTTTCTCCTATGGCGGATTCAGGTTTTGGAGCGCTGTGTGAGGAACCTTGACTTCTCTCCCGGAGGCATCTGCACCATTTTCCAAGTCAATGACCTCGAAAACTCTCTTTCTCCTTCCAAACGGGCTCTGCACCTGCTTCAGGACAACTATCCCGAGTTTGTTGCCAAACAGCTCTTTATCAACGTCCCCTGGTGGTTTCTTGCTTTCTATTCCATCATCTCTCCCTTCTTGACTCAGAGGACCAAAACCAAATTTGTCTTTGCCGCCCCTTCCAAGTCTCCCGATACCCTTTTCAAGTATATATCTCCCGAGCAAGTGCCTGTTCAGTATGGTGGCCTCAGTGTAGATTTCTGTGACTGCAACCCCGATTTCACTACGTCTGATCCCGTCACCGTTATTCCTATCAAGCCATCCACTAAGCAAACCGTGGAAATTGCTATTCATGAGATATGCATTATTCTTTTGGAGCTGCGGGTTGTGGGCTGGGAGGTTACCTATAATGCTGAATTCAAGCCCCTTGCTGAAGACTCATATGCCGTTATCATACACAAGCCCACCAGGATCTCCCCCACCGATCAACCCGTCATTTCCCATTCCTTTCAAGTTTCTCAACTTGGAAAACTGTTTCTCACCATAGACAATCCCACCTTCAAAACCAAGACTCTTCTTTACAGGTTCAAGATCAAACCCTCCTCTCCTTCACACTCTCTCTCCTCTCCCACTAATACATAAATACCACCTCATCATTGCTCTTGCTTCACCTTCACCCCATTCTCTCTTTCCTCTATTCATCTCTCAATCGTACCATATGGAACTGAAATTGCAGTTGCTTTGTCCCAATTATCTATCACTTTGATGCGTGAACCAATCCAACATGTACCAAGTCCTGCTTATCACAAGTTTCAATGTAAAATTTTATTCCTGTACTTATCCAGCGTGGAGTTTCGTTTTGGTCCAATTATGAGCATTTTATAAATCATAGATGTGTAATGTAATATAGAAGCAGTAAATAACTTCAGTTGAGTCTTGCAGCGCCTGCTGTTTTCTTTCTTCTTATTTCTGCATTTGATCATACTTTGGTCCTTCTATATTATTCTCG 1629 0.4451 MGENDRKAGQEVSRDEAKETVKKERKGIEELKKLVREKEGEEVWLWGVPLFKDDRTDVILLKFLRARELKVKEALVMIQNTLRWRKEFNMDAVLEEDLGDELDKVFFMHGHTREGHPVCYNVYGELHKYPNTEHKFLLWRIQVLERCVRNLDFSPGGICTIFQVNDLENSLSPSKRALHLLQDNYPEFVAKQLFINVPWWFLAFYSIISPFLTQRTKTKFVFAAPSKSPDTLFKYISPEQVPVQYGGLSVDFCDCNPDFTTSDPVTVIPIKPSTKQTVEIAIHEICIILLELRVVGWEVTYNAEFKPLAEDSYAVIIHKPTRISPTDQPVISHSFQVSQLGKLFLTIDNPTFKTKTLLYRFKIKPSSPSHSLSSPTNT 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00132 378 CDD SEC14 101 248 IPR001251 -
Pste1g00132 378 MobiDBLite consensus disorder prediction 1 22 - -
Pste1g00132 378 PRINTS Cellular retinaldehyde-binding protein signature 59 81 - -
Pste1g00132 378 PRINTS Cellular retinaldehyde-binding protein signature 205 224 - -
Pste1g00132 378 PRINTS Cellular retinaldehyde-binding protein signature 172 193 - -
Pste1g00132 378 SMART CRAL_TRIO_N_2 56 81 IPR011074 -
Pste1g00132 378 Coils Coil 14 41 - -
Pste1g00132 378 SMART sec14_4 99 250 IPR001251 -
Pste1g00132 378 SUPERFAMILY CRAL/TRIO N-terminal domain 11 97 IPR036273 -
Pste1g00132 378 Gene3D - 14 278 IPR036865 -
Pste1g00132 378 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 95 247 IPR001251 -
Pste1g00132 378 Pfam CRAL/TRIO domain 104 247 IPR001251 -
Pste1g00132 378 SUPERFAMILY CRAL/TRIO domain 105 258 IPR036865 -
Pste1g00132 378 PANTHER PATELLIN-1 16 366 IPR044834 GO:0008289
Pste1g00132 378 Pfam CRAL/TRIO, N-terminal domain 29 80 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00132 Pste-Chr1 523719 525518 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00132 60 242 Acyl Lipid Metabolism Gene Families AT1G55840 29.268 1.06e-11 63.2