Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00131 TAATAAATCACTCTGTTTAATTGCACAATCCCAATTCAAATTTCAAAACTAAACCCCTCTGTGAGAGAGAGAGAAAAGAAAGAAAGAAAGAAAGAGGTGCATAGCTTGGAAAGTTGTGTCTCCGAATCCGAATGCAAGAACCATGTCTCTCCTCAGCCGATTCTTCTACAAGCGGCCCCCAGACGGCTTGCTGGAATTCGCCGACAGAGTCTACGTCTTCGATTCGTGCTTCTCGACGGAAGCCCTCCCGGACGGAATGTATAGCCTCTACCTCCGGCAAATCATCTCGGACCTCCACGAGGACTTCCCGGACTCCTCCTTCGTGGCCCTCAACTTCCGCGACGGCGAGCACCGCTCCCGGTTCTCCCACATCCTCTGCGAGCTTGACGTGACCGTCATCGACTATCCCAAACAGTACGAGGGGTGCCCCCTCCTCCCCCTCTCCCTCCTCCACCACTTCCTCCGCCTCTCGGAGTCCTGCCTGGCGGACCCAAGCGGCCTCCTCCTCTTCCACTGCGAGCGCGGCGGATGGCCCCTCCTGGCCTTCCTCCTGGCCGCCTTTCTGGTCTTCCGCAAAGTCCAGAGTGGGGAGCGCCGGATTCTGGAGATGGTTCATAGGGAAGCCCCCAAGGGGTTGCTGCCCCTCCTCTCTCCGCTCAACCCTCTGCCTTCGCAGCTTCGCTATGTCCAGTATGTGGCCAGGAGGAACATTGGGGCCCACTGGCCCCCGCCCGAGCGCCCCCTCTCTCTCGACTGTGTTATTCTCCGAGGTGTTCCCGCCTTTGATGGCCCCAATGGCTGCAGACCCCTCTTTAGGATTTTTGGCCGGAATTTCCTTAGTAAAGGCCCCCTTTCTACTCACATGATTTATAATATGCATAAGAAGAAGAAGTCTTTGCGCCACTATAGACAGGCAGACTGTGATGTGATTAAGATTGATATTCAATGCTTAGTGCAAGGGGACGTGGTGTTGGAGTGTGTGCATCTGGACTTGGATCCGGAGAGGGAAGTCATGATGTTTCGTGTGATGTTCAACACAGCATTCATTAGGTCCAACATTTTGATGCTTAATACTGAGAATTTGGACATTCTTTGGGATTCAAAGGACCGATATCCGAAGGGCTTCCGAGCCGAGGTTTTGTTTGGGGAGGTTGAAAGCATAAGTCCTCCAAGGGCTCCAGCAAGTATTTTAGATGGTGAGGTGAAAGGTGGATTGCCTATTGAGGCGTTTTCAAGGGTTCAGGAACTTTTTAGTGGTGTAGAATGGGTTGAAAGTGGTGATGCGGCTGCTGTCTGGTTGTTCAAACAACTTACGGGCTTGAGTGATGCTAGAGAGCTTTCAAGGTTTCAAGGTAGAGGAAGTTGGTATTCATCACCCGCTGACTCTGAAGATAATGAATCGAGCACTGCTGATAGTTCAGATGAGGCCTTTGATGTTATTCCCAAGTCTTATTCTGATCCTTCTAGATTATCAATGTCTGACAACCCTGATTTGGTCCATCTAGCTTTTGAGAACAATGGTGGAGATTATGTAAATCTCACTTCAAGAACGGCTGATATGTCATTGATTGATAATGTGTCATCAGCTCATCATGCTCCAAGTAAGGAATATTCTCCTTGCTCGTCTCCTCCATCACCTTCACCAGTTCCAGCTACTCAAACCCTTTCCACAGCAGCACCACCGCCTCCTCCTCCTCCACCCCCTCCCCCTCTTATAAGTTGCAATGGCAATAGTTTTCCTAGTCAATCTCCACATGCTCCAGGACCTGTACAAACAAGTTCACCCCCACCACCTCCACCTCCTCCTCCTCCTCCAAGTCATCTACAAACATGTTCATCCCCACCACCACCTCCTCCTTCTCCTCCTGGTCCTGTGAAAACATGTCCATCCCCACCACCTCCACCTCCACCAAGATCTGTACAAACAGGTTCAGCTCCACCCCCACCTCCTCCTCTTCCTCCAGGTCCTGCACAAACAAGTTCAGCTCCACCACCTCCACGTCCTCTGGGATTTCTACGAACAGGTTCAGACCCTCCACCTCCACCACCACCTCCTCCAGGTCCTGTACAAACAGGTTCAGCCCACCCACCTCCACCACCTCCTCCAGGTCCTGTACAAACAGGTTCAGCCCCCACCTCCACCACCTCCTCCAGGTCCTGGGCAGACAGGTCCTGTACGAACAGGCTTGGCCCCACCACCTCCACCTCCTCCTCCAGGTCCTGCACGAACAGGTTCAGCACCTCCACCACCTCCACCTCCTCCAGGTCCTGTACGAACAGGTTCAGCACCGCACCACCTCCACCTCCTCCAGGTCCTGCACGAACAGGTTCAGCACCGGCACCACCTCCACCTCCTCCACATCCTGCACGAACAGGTTCAGCACCGGCACCACCTCCACCTCCTCCAGGTCCTGGACGAACAGGTTCAGCACCAGCACCACCTCCACCTCCTCCAGGTCCTGGACGAACTGGGTCAGCTCCACCACAAGCACCAAAGCCTCCAGGTGCTCCGCCTCCTCCACCTGGCCATGGTGCATCACCAATGGCACCTCCACCTCCTACAGCTAGGGCCCCAGGTGTGGCACCACCCCCAGGCAAGGCTTCAACAACAAACGTTGGAAGAGGTCGTGGTACCGCTACTGCTCCTAAGAAAACTTTGCTAAAACCACTGCATTGGGTGAAAGTTGCTCGAGCAACCAAGGGAAGTCTATGGGCTGATTCACAGAAACAGGATAGTGGAACAAGGGCCCCTGAGATAGATATATCAGAACTTGAGAGCCTATTTTCAGCAGCATCTACTTCTGACAGTAGCAGTACTAAAGGTGGAGGTCGGCGTGGTCCTAATATTAACAAACCTGAGAAAGTACAATTGGTTGACTTGCGTAGAGCATATAATTGTGAGATAATGCTTTCTAAAATCAAAATTCCATTGCCAGATATGCTTAAAGCAGTCCTGGCATTGGATTCTGCAGTTCTGGATATTGACCAGGTTGAAAATCTCATCAAGTTCTGTCCCACAAAGGAAGAGATGGAGATGTTAAAGAATTATGCAGGAAACAAAGAAATGCTCGGAAAGTGTGAACAGTTTTTTATGGAGCTGATGAAGGTTCCACGCGTGGAATCCAAATTAAGGGTTTTTGCTTTTAAAATCACCTTTTCTTCTCAGGTGAGTGATTTGAAGTCAAATTTGAATACAATCAACAATGCTTCCAGAGAGGTGAAAGAATCTGGAAAATTGCGTCAAATAATGCAGACTATTCTTACACTGGGCAATGCCTTGAATCAGGGAACAGCTCGGGGATCAGCAGTAGGATTCAAATTGGATAGCCTTCTTAAATTATCTGATACTCGTGCAAGAAATAACAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTTGCTGAGAAAATGCCAGAATTGCTAGATTTTGATAAGGATCTGGTCCATTTGGAAGCAGCTTCTAAGATTCAACTAAAAGCTTTGGCTGAAGAAATGCAAGCTGTGAGCAAAGGATTAGAGAAAGTTGAGCAAGAACTTGCTGCTTCTGAAAATGATGGTGCTATATCTACAGGATTTCGTAAGGTGTTGAAGAATTTTCTTGATATTGCTGAAGCTGACGTGAGGTCCCTTATATCATTGTATTCTGAGGTGGGAAGAAGTGCAGACTCTTTGTCCCAGTACTTTGGAGAGGATCCTGCTAGATGTCCCTTTGAACAAGTGACACAAATCCTTGTTGTCTTTGTCAAGATGTTCAACAAGTCAAGGGAGGAGAATGAAAGGCAGGCCGATGCTGAAAAAAAGAAATTAGAGAAAGAAGCCTTGAAGGAAAGGACAGCAAATAACTCACATCCCAAAAAAGACGTTAGATAGACATCCCTAAACAAGCAAGCAACATGGTTACTTTCAGTTCAAAACAACACACTGCGCTATACATTTCGGACTATCTCAAATGCATGTACCATTGGGATGTATTCCTTCCAAGATGATGCTGGCCGTTGGATGCATGTGGTTAGGCAGTTCCTTATAGTTGGATCAACGTGCCTCTCCGATTGTGTTGCACTGCTACTAAAGGAGAAATATATCCACAGGGTGGTGATCTTTTGTAATTATTCCACAGGGCAACTAATATAGAAAATTCACGCTTTCCTCCTCTTTAAAATATAGAGGCCGTATATAATTTTTTGAAGTTCAAATTTTCTTGTGCCATTGCAGATGCACTTCTCATTTTGTGATCTAGCTGCAGATAATTTTTTGTAATTCAAAAACACTTTGGATATACGATAACAAATTCATCTCATGTATAATAAAACCATAATTAGCAATCATGATTGTAGCTGAGCAAAGGCGTTAAGCAGCAATGTAGCC 4366 0.4814 MSLLSRFFYKRPPDGLLEFADRVYVFDSCFSTEALPDGMYSLYLRQIISDLHEDFPDSSFVALNFRDGEHRSRFSHILCELDVTVIDYPKQYEGCPLLPLSLLHHFLRLSESCLADPSGLLLFHCERGGWPLLAFLLAAFLVFRKVQSGERRILEMVHREAPKGLLPLLSPLNPLPSQLRYVQYVARRNIGAHWPPPERPLSLDCVILRGVPAFDGPNGCRPLFRIFGRNFLSKGPLSTHMIYNMHKKKKSLRHYRQADCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNTENLDILWDSKDRYPKGFRAEVLFGEVESISPPRAPASILDGEVKGGLPIEAFSRVQELFSGVEWVESGDAAAVWLFKQLTGLSDARELSRFQGRGSWYSSPADSEDNESSTADSSDEAFDVIPKSYSDPSRLSMSDNPDLVHLAFENNGGDYVNLTSRTADMSLIDNVSSAHHAPSKEYSPCSSPPSPSPVPATQTLSTAAPPPPPPPPPPPLISCNGNSFPSQSPHAPGPVQTSSPPPPPPPPPPPSHLQTCSSPPPPPPSPPGPVKTCPSPPPPPPPRSVQTGSAPPPPPPLPPGPAQTSSAPPPPRPLGFLRTGSDPPPPPPPPPGPVQTGSAHPPPPPPPGPVQTGSAPTSTTSSRSWADRSCTNRLGPTTSTSSSRSCTNRFSTSTTSTSSRSCTNRFSTAPPPPPPGPARTGSAPAPPPPPPHPARTGSAPAPPPPPPGPGRTGSAPAPPPPPPGPGRTGSAPPQAPKPPGAPPPPPGHGASPMAPPPPTARAPGVAPPPGKASTTNVGRGRGTATAPKKTLLKPLHWVKVARATKGSLWADSQKQDSGTRAPEIDISELESLFSAASTSDSSSTKGGGRRGPNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPDMLKAVLALDSAVLDIDQVENLIKFCPTKEEMEMLKNYAGNKEMLGKCEQFFMELMKVPRVESKLRVFAFKITFSSQVSDLKSNLNTINNASREVKESGKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELAASENDGAISTGFRKVLKNFLDIAEADVRSLISLYSEVGRSADSLSQYFGEDPARCPFEQVTQILVVFVKMFNKSREENERQADAEKKKLEKEALKERTANNSHPKKDVR 1242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00131 1242 SMART PTEN_C2_2 196 336 IPR014020 -
Pste1g00131 1242 Gene3D Formin, FH2 domain 829 1216 IPR042201 -
Pste1g00131 1242 SUPERFAMILY Formin homology 2 domain (FH2 domain) 905 1232 - -
Pste1g00131 1242 ProSiteProfiles Formin homology-2 (FH2) domain profile. 830 1230 IPR015425 -
Pste1g00131 1242 ProSiteProfiles C2 tensin-type domain profile. 198 337 IPR014020 -
Pste1g00131 1242 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 197 337 IPR035892 -
Pste1g00131 1242 SMART it6_source 514 1242 IPR015425 -
Pste1g00131 1242 PANTHER FORMIN-J 672 1234 - -
Pste1g00131 1242 MobiDBLite consensus disorder prediction 407 445 - -
Pste1g00131 1242 MobiDBLite consensus disorder prediction 484 838 - -
Pste1g00131 1242 Pfam Formin Homology 2 Domain 833 1205 IPR015425 -
Pste1g00131 1242 MobiDBLite consensus disorder prediction 715 813 - -
Pste1g00131 1242 FunFam Formin-like protein 830 1216 - -
Pste1g00131 1242 MobiDBLite consensus disorder prediction 492 527 - -
Pste1g00131 1242 MobiDBLite consensus disorder prediction 882 897 - -
Pste1g00131 1242 MobiDBLite consensus disorder prediction 1207 1242 - -
Pste1g00131 1242 Coils Coil 1111 1138 - -
Pste1g00131 1242 Coils Coil 1205 1228 - -
Pste1g00131 1242 Gene3D - 195 340 - -
Pste1g00131 1242 MobiDBLite consensus disorder prediction 661 714 - -
Pste1g00131 1242 MobiDBLite consensus disorder prediction 542 660 - -
Pste1g00131 1242 Pfam C2 domain of PTEN tumour-suppressor protein 197 335 IPR014020 -
Pste1g00131 1242 Gene3D Protein tyrosine phosphatase superfamily 15 189 IPR029021 -
Pste1g00131 1242 MobiDBLite consensus disorder prediction 882 905 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00131 Pste-Chr1 519893 530812 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00131 1 467 FH2 protein (formin) Gene Family AT1G31810 67.728 0.0 699
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00131 1 519893 530812 Pste1g00131 1 519893 530812 ECH