Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00120 ATTAATTTCAAATTTGACGAGCCATAAATTATAAACAGAGTTGAGAGTTCTATCTCTTGCTGAAACCAATCTGAAAAAGCCAGCAAAAGACTCCTACTTTGGTCTTGGGATTCGTTTCCCTACAAAGATCCTCTTAATCCCATCAATTAACAATTTTTTTTCCTTAAAAAATTCACAAGGCTTATGATTGTGAAACAATAAATTAAACAAATTCATGGGCGAAAAGAGACCCTACAAATCTACAATTTTTCTATCATGGCAACATTATGGTGGGTTTGGGTTGGTTTTGGATGTGGGCGGTAAAAGCTGAATTTGTTAAAGAATCAACATTTTCGTAAATCAGAGAGCAACTCATGTGGCGGCTTGTAGTATATGTACCAGGCAAAAGACGATCATTACTTTCTGTTGCTCCTGGTCCTTCTCAAGTACTTCATATCTGACAAGGCTTATTTATTTATTATATATTTAATTATTTACATTAAAATTAAAACATTTTTTAATAACATTATTATTTTACTGGTTGTGGATACTTAGGGATAAGAAATAATTGAGGAAATTTCCTTGATATTTTTCTTACTGTACGAGAAGTCTATTTTGGCTGTATTTATATCTTTGCATTGACCCACTTCTAAGAGAGAGAAAGAGGTAGATATATATCAAATGATGATCATGGCATGAGGGTCATCATCACCCCTATCTGATCTTCTATTTCTGAGGAAGTATTTCTCATCTTTGTTCCTAGGCTGGTTTTCGTGGCATCTCCATGTTGGCTTATTAAGAGAACAAGTCTGAGATACTAGGAGCTCTCACTTATTCTCCAAACTACCACCGTCCCCGTTCCGAAGTAGCCTGCACCGACCACCGACGACGGCGTCGCAACCACCTCCAACCCTACTTAGATCCGTTTCCCACATACCTAGCTAATTATTCCTCTCTTCCAACAAGACTTTCAGTAGCTAGTGGATTCTGTTGCCGATGAAACAGCTCAACCAGCCAACCTGTAAAAACCTTGCAATATTCTAACACAAGAAACCTGAAGCAATATAAGAAAATTGCTGAATTTAGAAGAACATTAGCAACTTGACCAGCTTTGTATATATATATATATATATATAATTAAATTTGATTCGATGGCTCGACAACTGTGTGAAGAGAAATCATCATCTGGATTCTGCTACTCTGATGTATCAACGGGACATCCAACGATGCTAGTGAACCAGATCCAAGGCTTTGTGTCAGACCCGGAGATGTACAACCTCACGACAGGCATGGAAATGATAGGGTTTCCAAAGAGTGACACCAACGCTGTCATGTGGAGAAGTTTCATCCCCAAACCGGGTCCTTCCTCTTCCAAAACCATCAACCACTCTTCCACCAATTTCTACCACCATGACTACAATCACAACAAATCTTCAGATTTCACACCCGGGAATATTTCTGAAACAAGTGCCGAGAATCTAATCGTAGGAACTCACGATTCAGCGCCATGGCAAGACAACAACAACAACAACAGGTTTGATGATTCTTCTTTAAGATGTGTATTCCCTTGTGAAGCCAACGAAAGACCTAGTCAGGGTCTTTCACTATCTCTTAGTTCAACAAACCCCTCCACTATTGGGTTGCAGTCTTTTGAGCTAAGACAAACAAGCCATCATCCTGATTTTGTTTCGTCGAATTCCAGAGAAGGGTTCTTTGGAAAATCAGCGTCTGTTCAGCAGCAACAGATGTTACAAGATGGGTATGTGAGTTCTAATTCTAAAGCTGCAAGTGTTTATCAACAAGGACAAGGACAAGGACATTTCCTGGTGAAGAACTCCAAGTACTTGGTACCTGCACAGGACCTTCTGAACGAGTTTTGTAGTCTAGGCGCAAAGCGAAGCGAGATGGAAAAGCAAAAATCGTTGAAGAAGCAGTGGGAAGAGGAAAATAACGATGTCGGTTCCTCGAAGAAGCATTCTTTGACCTCTCTAGAGTTCGTGGAGTTGCAGAAGAGAAAGACAAAGCTGCTTGCGATGCTGGAAGAGGTTGACAGAAGGTACAAGCACTACCGCAGTCAGATGAAGAGCGTGGCGTCATCCTTTGAAGCGGTGGCGGGGAATGGCGCGGCGACGGTGTACTCGGCTTTGGCGTTGAAAGCCATGTCGAGACATTTCAGGTGTTTGAAGGATGGAATAATGGGGCAGATTCAAGCAACAAGAAAAGCCATGGGAGAGAAAGACCCTATTGCACCAGGCACAACAAGGGGCGAAACGCCAAGGCTCAAAATCATTGACCAAGCACTGAGACAACAAAGGGCATTTCAGCAAATGAGTATGATGGAAACCCACCCTTGGAGACCCCAACGTGGCCTTCCTGAGCGTGCCGTTTCAGTTCTTCGGGCTTGGCTTTTCGAGCATTTTCTCCATCCGTACCCAAGCGATGTTGATAAACATATTCTAGCACGCCAAACCGGTCTCTCAAGAGGCCAGGTTTCAAATTGGTTTATTAATGCAAGGGTGAGGCTGTGGAAGCCAATGGTGGAGGAAATGTACTTAGAGGAAGTGAAGGAACATGAAAAAAGCATTGCTTCCTCAGAGGGAGCTACTGGTCCAGACAATGATGTAAACGAGAATGTTGAAAACCCTCCAGGTCGATCAGAGGATCAGAAGCCATCACTGGTTCGAATAGACTCGGAGTGTGCGTCCTCCATCATCAATAACCACACCCCAGATAACAAAAACGACCCAAAAGGGCAAGAACAGTGCTTTGGGTCGGTGGAGCTAGATTTTTCATCCTACACACACCCGTCCTCGGGCATGGTTTCTTATGGAAGCAATGATCGAAATGGGAACAACCAAAACGGGGTGTCTTTGACGCTAGGGTTACAACAGCATGGGGTGAGCCTAGCGTTCCCGCCAGCAACACAAACTTCACTCTACTACCCAAGGGACCAAATTGAAGATTGTCAACCAGTTCAGTACTCTCTTTTGGATGGTGAAGCACAAAACCTGCCTTACAGAAATTTGATGGGAGCACAGCTTCTGCATGATTTGGCAGGATAGATCGTGCATTCTTGATCTTTAGGGGAATTCAGATTAAAACGGTGAGTATAATAATCAAGTAGAAATTAATTAAGATAAGTTTTTTCTTCTTCCAATTATAATTAGCTAGTTCCGTACAAAATTATATAGTATAAAACTAATGCTTAATTTCATACATAAAGCTATATACTTGGTTAATTAGATAAACGTACAGTTTAATTTCAGAATGTGTATTCATACCTATAATCTGGAATTGGAATTCGTAAGTCAACATTTATTCAGAATTTGTTTACTTAATATATATAATCCTTTGTTTTTGTAAGAACTAACAGCTAATATAGTTTCCCTACTTTGGAATTGGAATGCTCCTGGCTGTGTTCTATCCCATGGAGGGATTACTTTGGTAGGGGCTTCCATTTGCCACTGATGTAATGGCAAATAAAATTCGGTTTGTGAGGATTGGAGATATTTGTAG 3495 0.4117 MARQLCEEKSSSGFCYSDVSTGHPTMLVNQIQGFVSDPEMYNLTTGMEMIGFPKSDTNAVMWRSFIPKPGPSSSKTINHSSTNFYHHDYNHNKSSDFTPGNISETSAENLIVGTHDSAPWQDNNNNNRFDDSSLRCVFPCEANERPSQGLSLSLSSTNPSTIGLQSFELRQTSHHPDFVSSNSREGFFGKSASVQQQQMLQDGYVSSNSKAASVYQQGQGQGHFLVKNSKYLVPAQDLLNEFCSLGAKRSEMEKQKSLKKQWEEENNDVGSSKKHSLTSLEFVELQKRKTKLLAMLEEVDRRYKHYRSQMKSVASSFEAVAGNGAATVYSALALKAMSRHFRCLKDGIMGQIQATRKAMGEKDPIAPGTTRGETPRLKIIDQALRQQRAFQQMSMMETHPWRPQRGLPERAVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRGQVSNWFINARVRLWKPMVEEMYLEEVKEHEKSIASSEGATGPDNDVNENVENPPGRSEDQKPSLVRIDSECASSIINNHTPDNKNDPKGQEQCFGSVELDFSSYTHPSSGMVSYGSNDRNGNNQNGVSLTLGLQQHGVSLAFPPATQTSLYYPRDQIEDCQPVQYSLLDGEAQNLPYRNLMGAQLLHDLAG 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00120 636 MobiDBLite consensus disorder prediction 477 509 - -
Pste1g00120 636 SUPERFAMILY Homeodomain-like 402 467 IPR009057 -
Pste1g00120 636 FunFam BEL1-like homeodomain protein 4 404 466 - -
Pste1g00120 636 ProSiteProfiles 'Homeobox' domain profile. 398 461 IPR001356 GO:0003677
Pste1g00120 636 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 142 485 - -
Pste1g00120 636 Pfam Associated with HOX 226 348 IPR006563 -
Pste1g00120 636 Gene3D - 404 466 - -
Pste1g00120 636 SMART HOX_1 401 465 IPR001356 GO:0003677
Pste1g00120 636 SMART prehox3 220 350 IPR006563 -
Pste1g00120 636 Pfam Homeobox KN domain 418 457 IPR008422 GO:0003677|GO:0006355
Pste1g00120 636 CDD homeodomain 401 462 IPR001356 GO:0003677
Pste1g00120 636 MobiDBLite consensus disorder prediction 482 498 - -
Pste1g00120 636 Coils Coil 245 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00120 Pste-Chr1 477623 482345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00120 86 635 Homeobox Transcription Factor Family AT5G41410 47.030 5.56e-145 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pste1g00120 POX 6.4e-45 No_clan