Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00115 ATGGCGCTGCGGCTCGGCCGCGTGACAACGGTGGTGATCTCCTCGGCCGACGCCGCCAGAGAGGTGCTGCAGACGCACGACCTCTCGCTCTCCAACCGAACCGTCCCCGACGCGCTGCCGGTCCTCAACCACCACCAGTACAGCCTCTCCTTCATGCGCGTCTCGCCGCGCTGGCGCGATTTGAGGAAGATTTGTAATAATCAGTTGTTTGCGAATAAGACTCTTGACAACAGTCAAGACCTTTTGAGTGACATCAAGAAGGCAAGTGAAGTTGGTGAAGCAGTGGACATAGGAAGAGCAGCATTCAAGACAATAATAAACTTGTTGTCCAACACCTTTTTCTCTGCAAATTTTGTACACTCTACAGCTGAGACAGGAGAGTACAAGGAGATAGTTGTGAGCATTTTGAAGGAACCTAACATCTCTGACTTCTTTCCTGCCCTGAAGGTCTTTGACCTTCAAGGTATCAGGAAACGCTCCATTGTGTCTGTCAAGAAGGTTCTTACCATCTTTCGTCGATTCGTCGGCAAAAGGATGGCGACAAGGGAGGGGACTGGACAGGCCAGCCATGATGATGTGCTTGATGCCTTGCTTAATATATCTCAAGAGAATGGCAAGATAGAGATGGATAAAGATGAAATTGAACACTTATTACTGAAAGAACTGTGGGAAGTTGTAGGCAAAGGAAACCCTGTTGAAGAAACAGACATTGCAAGGCTTCCATACTTAAACGCAGTGATAAAAGAAACCTTCCGTGTGCATCCACCAGTCCCACTGTTACTCCCTAGAAAAGCTGAAACAGATGTTGAAATTGGAGGCTACACCATCCCAAAAGATGCACAAGTTTTGGTCCATGCATGGGTCATTGGAAGAGATCCAGAAAAATGGGACAGCCCTAATGTGTTTCTGCCAGAGAGGTTCTTAGACACTGAAATTGACATTAAGGGACACCACTTTGAGCTTATTCCATTTGGGTCTGGAAGGAGAATTTGCCCTGGCCTGCCATTGGCTATTAGAATGTTGCCTTTGATGTTGGGGTCTTTGGTCAATTGCTTTCATTGGAAACTTGAAGAGGGGATAAAGCTTGATGACTTGGACAAGGAAGATGAGTATGGGATTACATTGGAAAAATCTCAACCTGTGAGGATTGTTCCTGTCAAATTGGGTAACTGA 1173 0.4663 MALRLGRVTTVVISSADAAREVLQTHDLSLSNRTVPDALPVLNHHQYSLSFMRVSPRWRDLRKICNNQLFANKTLDNSQDLLSDIKKASEVGEAVDIGRAAFKTIINLLSNTFFSANFVHSTAETGEYKEIVVSILKEPNISDFFPALKVFDLQGIRKRSIVSVKKVLTIFRRFVGKRMATREGTGQASHDDVLDALLNISQENGKIEMDKDEIEHLLLKELWEVVGKGNPVEETDIARLPYLNAVIKETFRVHPPVPLLLPRKAETDVEIGGYTIPKDAQVLVHAWVIGRDPEKWDSPNVFLPERFLDTEIDIKGHHFELIPFGSGRRICPGLPLAIRMLPLMLGSLVNCFHWKLEEGIKLDDLDKEDEYGITLEKSQPVRIVPVKLGN 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00115 390 Gene3D Cytochrome P450 1 215 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00115 390 CDD CYP76-like 1 385 - -
Pste1g00115 390 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 220 387 - -
Pste1g00115 390 SUPERFAMILY Cytochrome P450 2 385 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00115 390 Pfam Cytochrome P450 3 219 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00115 390 Pfam Cytochrome P450 211 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00115 390 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 324 333 IPR017972 GO:0005506|GO:0016705
Pste1g00115 390 Gene3D Cytochrome P450 216 387 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00115 390 PRINTS E-class P450 group I signature 321 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00115 390 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00115 390 PRINTS E-class P450 group I signature 244 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00115 390 PRINTS E-class P450 group I signature 331 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00115 390 PRINTS E-class P450 group I signature 104 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00115 390 PRINTS E-class P450 group I signature 285 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00115 Pste-Chr1 445028 452204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00115 1 387 Cytochrome P450 AT2G45570 40.826 6.05e-109 327