Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste1g00111 | ATGAACAAGCTGGTGGTAGAGGTTGTGGATGCGTCTGACCTTATGCCCAAAGATGGGGAAGGGTCAGCCAGCCCCTTTGTAGAGGTAAAGTTTGATGAGCAGCGCCACAGCACCGAGACCAAGCACAAAGACCTCAATCCTTATTGGAACGAGAAGTTAGTGTTCGACATAGATAACCCCAGAGATCTTGCCCATAAGACTATTGAGGTGGTTGTATACAATCACAACGATGGGAACCACAATAACTTCCTTGGAAGGGTGAAACTTTCGGGTGCTTCTATCCCTCTATCGGAGTCCCAGGCTGGTGTGGAACGCTACCCACTCGAGAAGCGTGGTCTCTTTTCAAACATCAGGGGAGATATTGCTCTCAGATGTTATGCGCTGGCGCTGCATCATGATCCAATTCCTCCAACCTCACAAACACAGGACACCAGTCCTCCTGCTGCTGCTGCTGCTGCTGGTGGTGGTGCTGCTGCTGCTGCTGGTGGTGGTGCCGATGATGATGATGAGGATCAGGACACTCCCTTGCAAGAAATAAACCCCAACATGGAGTTAGAGGAGGAAAGCCAGAAGAAGAAGAAGATGAAAAAGAAAGAAAAGGAAGTGAGGAGTTTTCACTCAATACCAGCTGGGGCTCCAAAAGCACAGGCACCGACAGTGGAAAGCTTAAGGAGGGGGGATTTTGCAAAAGCGGGGGTAGCCAATCCGAATGTAATGTTAATGCAGATCCCAAAGCAAAATCCTGAGTATGCATTGGTGGAGACAAGTCCACCACTGGCGGCCCGTTTGCGGTACAGAGGAGGAGACAAGATATCGACGACGTATGATTTGGTGGAACAGATGCATTACCTGTACGTGAATGTGGTGAAGGCAAGGGATCTGCCGGTGATGGACATAACGGGAAGCCTGGACCCTTATGTGGAAGTGAAGCTGGGTAACTACAAGGGAGTGAGCAGGCACTTGGACAAGAATCAGAACCCTGTTTGGAACCAAATATTTGCCTTCTCCAAGGAGAGGTTGCAATCCAATTTGGTGGAAGTGAGTGTGAAGGATAAGGACATCGGGAAAGATGATTTTGTGGGGAGGGTTGCGTTTGATCTGACGGAGGTTCCTCTTCGGGTACCCCCCGACAGCCCCTTAGCTCCCCAGTGGTACCGATTAGAGGACAAGAAAGGCCACAAAATCCATAACAATGGGGAAATCATGCTCGCTGTTTGGATGGGAACTCAGGCTGACGAGTCCTTTCCGGAGGCCTGGCACTCCGATGCTCATAACGTCACTCACTCCAACCTTGCCAACACCCGCTCCAAGGTTTATTTCTCACCCAAGCTTTACTATCTCAGAGTTCAAGTCATCGAAGCCCAGGATCTTGTTCCTTCCGACAAAGGAAGAGCCCCCGACGCCGTTGTCAGAGTCCAACTAGGAAGTCAGACGAGATTCACAAGACCTTCTCAGATCAGAAGCACCAACCCTGTTTGGAACGACGAGCTCATGTTTGTGGCAGCCGAGCCATTCGAGGATTTTATCATCCTCACAGTTGAGGACAGAGTGGGTCCCACTCCGGAAATCTTGGGAAGGGAGATTGTATCTGTGAGAAGTGTTATGCCGAGACACGAGAGCAGCAAGCTCCCAGATTCTCGTTGGTTCAATTTGCACAGGCCAAGTGGGGAGGAAGAAAAGGAGAAAAAGAAGGAGAAATTCTCGAGCAAGATTCACCTGAGAATGTGTGTGGAGGCCGGGTACCATGTGCTTGACGAGTCAACGCATTTCAGCAGTGATCTTCAGCCATCCTCAAAGCATCTAAGGAAGAAAAACATAGGAATACTGGAAGTAGGGATACTGAGTGCGAGGAATTTGCTACCAATGAAGGGGAGGGGGACGGACGCATACTGCGTGGCCAAGTACGGCAACAAATGGGTTAGAACAAGAACATTGCTGGACACGCTGTCCCCTCGATGGAATGAGCAATACACCTGGGAAGTTCACGATCCATGCACGGTCATCACCATTGGGGTGTTCGACAATCACCACGTCAATGGGAGCCCCGATGCCAGGGATCAGAAAATAGGAAAGGTAAGAATTCGGCTGTCAACTCTGGAAACGGATAGGGTGTACACTCATTTTTATCCACTGCTGGTTCTGCAACCCAATGGGCTGAAGAAGAACGGAGAGCTTCACCTGGCACTCAGATTCAGCTGCACGGCATGGGTTAACATGGTTGCCCAGTATGGCAGGCCTTTGCTTCCCAAAATGCATTATGTCCAACCCATCCCTGTTCGCCACATCGATTGGCTCCGTCACCAGGCCATGCTGATTGTGGCCGCTCGCCTCTCCAGAGCCGAGCCACCCCTCCGTCGCGAAGCCGTTGAGTACATGCTCGACGTTGATTACCATATGTGGAGCCTCCGCAGAAGCAAAGCCAACTTTTATCGCATAATGTCTCTCCTCAAAGGACTTACCTCTGTTTGCAAATGGTTTGATGACATCTGCACTTGGAGAAACCCCATCACAACCTGCCTCGTTCACGTCTTGTTCCTTATTCTCGTCTGCTACCCCGAACTCATCTTGCCCACCATTTTTCTTTACCTCTTTGTCATTGGCATCTGGAATTACCGCTTCCGCCCCCGTCACCCACCCCACATGGATGCCCGTCTTTCACAGGCCGAAACCGCCCACCCCGATGAACTCGACGAGGAATTTGATTCTTTTCCAACCTCTAAACCTTCCGATATTGTCCGCATGAGGTACGACAGATTGCGCAGTGTGGCAGGCAAAGTTCAGACCGTCGTCGGTGATTTGGCTACTCAGGGCGAGCGAGCTCAGGCCCTTCTAAGTTGGAGAGACTCCCGCGCTACATCTATCTTCATCATCTTCTCCCTCATCTGGGCCGTTTTCATTTACGTTACTCCCTTCCAATTCATCGCAATTCTGCTTGGCCTCTACTTCCTCCGTCATCCTCGCTTCAGGAGAAAGATGCCATCCGTTCCTGTTAATTTCTTCAAGAGATTGCCTTCTAAATCCGATATGCTCATATGA | 3036 | 0.5046 | MNKLVVEVVDASDLMPKDGEGSASPFVEVKFDEQRHSTETKHKDLNPYWNEKLVFDIDNPRDLAHKTIEVVVYNHNDGNHNNFLGRVKLSGASIPLSESQAGVERYPLEKRGLFSNIRGDIALRCYALALHHDPIPPTSQTQDTSPPAAAAAAGGGAAAAAGGGADDDDEDQDTPLQEINPNMELEEESQKKKKMKKKEKEVRSFHSIPAGAPKAQAPTVESLRRGDFAKAGVANPNVMLMQIPKQNPEYALVETSPPLAARLRYRGGDKISTTYDLVEQMHYLYVNVVKARDLPVMDITGSLDPYVEVKLGNYKGVSRHLDKNQNPVWNQIFAFSKERLQSNLVEVSVKDKDIGKDDFVGRVAFDLTEVPLRVPPDSPLAPQWYRLEDKKGHKIHNNGEIMLAVWMGTQADESFPEAWHSDAHNVTHSNLANTRSKVYFSPKLYYLRVQVIEAQDLVPSDKGRAPDAVVRVQLGSQTRFTRPSQIRSTNPVWNDELMFVAAEPFEDFIILTVEDRVGPTPEILGREIVSVRSVMPRHESSKLPDSRWFNLHRPSGEEEKEKKKEKFSSKIHLRMCVEAGYHVLDESTHFSSDLQPSSKHLRKKNIGILEVGILSARNLLPMKGRGTDAYCVAKYGNKWVRTRTLLDTLSPRWNEQYTWEVHDPCTVITIGVFDNHHVNGSPDARDQKIGKVRIRLSTLETDRVYTHFYPLLVLQPNGLKKNGELHLALRFSCTAWVNMVAQYGRPLLPKMHYVQPIPVRHIDWLRHQAMLIVAARLSRAEPPLRREAVEYMLDVDYHMWSLRRSKANFYRIMSLLKGLTSVCKWFDDICTWRNPITTCLVHVLFLILVCYPELILPTIFLYLFVIGIWNYRFRPRHPPHMDARLSQAETAHPDELDEEFDSFPTSKPSDIVRMRYDRLRSVAGKVQTVVGDLATQGERAQALLSWRDSRATSIFIIFSLIWAVFIYVTPFQFIAILLGLYFLRHPRFRRKMPSVPVNFFKRLPSKSDMLI | 1011 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste1g00111 | 1011 | ProSiteProfiles | C2 domain profile. | 1 | 110 | IPR000008 | - | |
| Pste1g00111 | 1011 | MobiDBLite | consensus disorder prediction | 184 | 204 | - | - | |
| Pste1g00111 | 1011 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 283 | 423 | IPR035892 | - | |
| Pste1g00111 | 1011 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 607 | 737 | IPR035892 | - | |
| Pste1g00111 | 1011 | CDD | C2D_MCTP_PRT_plant | 608 | 728 | IPR047255 | - | |
| Pste1g00111 | 1011 | ProSiteProfiles | C2 domain profile. | 265 | 385 | IPR000008 | - | |
| Pste1g00111 | 1011 | MobiDBLite | consensus disorder prediction | 136 | 204 | - | - | |
| Pste1g00111 | 1011 | Pfam | Plant phosphoribosyltransferase C-terminal | 856 | 1010 | IPR013583 | - | |
| Pste1g00111 | 1011 | FunFam | C2 domain-containing protein | 278 | 424 | - | - | |
| Pste1g00111 | 1011 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 445 | 598 | IPR035892 | - | |
| Pste1g00111 | 1011 | Pfam | C2 domain | 3 | 102 | IPR000008 | - | |
| Pste1g00111 | 1011 | Pfam | C2 domain | 446 | 550 | IPR000008 | - | |
| Pste1g00111 | 1011 | Pfam | C2 domain | 283 | 385 | IPR000008 | - | |
| Pste1g00111 | 1011 | Pfam | C2 domain | 607 | 711 | IPR000008 | - | |
| Pste1g00111 | 1011 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 3 | 142 | IPR035892 | - | |
| Pste1g00111 | 1011 | CDD | C2C_MCTP_PRT_plant | 446 | 596 | IPR047258 | - | |
| Pste1g00111 | 1011 | SMART | C2_3c | 283 | 379 | IPR000008 | - | |
| Pste1g00111 | 1011 | SMART | C2_3c | 608 | 708 | IPR000008 | - | |
| Pste1g00111 | 1011 | SMART | C2_3c | 446 | 543 | IPR000008 | - | |
| Pste1g00111 | 1011 | SMART | C2_3c | 3 | 108 | IPR000008 | - | |
| Pste1g00111 | 1011 | ProSiteProfiles | C2 domain profile. | 425 | 544 | IPR000008 | - | |
| Pste1g00111 | 1011 | Coils | Coil | 182 | 202 | - | - | |
| Pste1g00111 | 1011 | CDD | C2B_MCTP_PRT_plant | 283 | 409 | IPR047257 | - | |
| Pste1g00111 | 1011 | Gene3D | C2 domain | 590 | 733 | IPR035892 | - | |
| Pste1g00111 | 1011 | Gene3D | C2 domain | 270 | 407 | IPR035892 | - | |
| Pste1g00111 | 1011 | Gene3D | C2 domain | 427 | 577 | IPR035892 | - | |
| Pste1g00111 | 1011 | PANTHER | PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 | 3 | 1010 | IPR047259 | - | |
| Pste1g00111 | 1011 | ProSiteProfiles | C2 domain profile. | 590 | 709 | IPR000008 | - | |
| Pste1g00111 | 1011 | Gene3D | C2 domain | 1 | 129 | IPR035892 | - | |
| Pste1g00111 | 1011 | CDD | C2A_MCTP_PRT_plant | 3 | 129 | - | - | |
| Pste1g00111 | 1011 | FunFam | C2 domain-containing protein | 590 | 735 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste1g00111 | Pste-Chr1 | 434627 | 437662 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste1g00111 | 1 | 1011 | Lipid Metabolism Gene Families | AT1G22610 | 71.662 | 0.0 | 1475 |