Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00108 GCGAGCGGCGTTAAAAGAATAGAGTTTGGAGGTTTAGGGCAGAGCGGAGATGGAGGACATTGAGGATTTGCTGATTGGAAGCAGAAATGCAAGTCCTCAGGGCTTCCGTTTGCCATTGGCAGCGGCTGTTGGCGTTGGATCGAAGCGGAATCAACTCTCTTGTTCTTCCCCTTCATCTGCAATTCCTGGCACTCAGAGTATCTACATAAAGACCTTTGGCTGCTCTCATAACCAGGCAAGTGCTACTTCTCATCCTCTAAGTGACAGTGAATATATGGCTGGTCAGCTTACGGCTTTTGGTTATTCATTGAGCGATAATCCAGAGCAAGCAGATCTCTGGCTCATCAACACTTGCACGGTGAAATCCCCAAGCCAGTCTGCCATGGATACCATCATAACAAAAGGAAAATCTTCAAATAAACCACTTGTTGTTGCTGGTTGTGTCCCTCAAGGAAGTCGAGATTTGAAAGAGCTAGAAGGGATCAGCATAGTTGGAGTCCAGCAAATTGATCGTGTTGTTGAAATTGTAGAGGAGACTTTAAAAGGTCATGAAGTGCGACTTTTGACCCGTAAGAAATTGCCCTCACTCGATCTTCCAAAGGTAAGGAAGAACAAGTTTGTTGAGATTCTTCCTATTAATGTTGGTTGTTTAGGTGCTTGCACTTATTGCAAGACAAAGCATGCTCGTGGTCACCTAGGAAGTTACACAATTGATAGCCTTGTTGGACGTGTAAAATCTGTCATATCTGAAGGGGTTAAAGAGATATGGCTTAGCAGTGAGGACACTGGAGCATATGGTCGTGACATTGGTGTCAATCTTCCAACTTTACTGAATTCCTTAGTAGCAGAACTACCAGCTGATGCAAGCACAATGTTGCGTATTGGAATGACCAATCCACCATATATCCTTGAACACTTGAAAGAGATTGCAGAGATTTTGCGGCATCCCTGTGTTTACTCTTTTCTGCATGTACCAGTTCAATCTGGAAGTGATACTATTTTAAGTGCAATGAATCGGGAATATACTGTAAGTGAGTTCAGGACTGTGGTAGATACTCTAACTGAGCTAGTGCCAGAGATGCAGATTGCCACTGATATAATATGTGGATTTCCTGGTGAAACGGATGAAGATTTTGTCCAAACCATCAACCTTATTAAAGAGTACAAGTTCCCTCAAGTTCATATTTCACAATTTTATCCTCGACCAGGGACACCTGCTGCAAGGATGAAAAAGGTTCCAAGTAATGTGGTTAAGAGAAGAAGCCGTGAACTGACAGCTGTCTTTGAATCCTTCACACCGTACTCTGGGATGGAAGGCAAAGTGGAAAGAATTTGGATTACTGATATTGCATCTGACGGAGTTCACTTGGTTGGTCATACGAAAGGATATATACAAGTTCTTGTACTTGCTGCAAACCATATGCTTGGAACTTCAGCTATGGTTAAGATAACATCTGTGGGAAGGTGGTCAGTTTTTGGGGAAGTAATTGAGACAGTCCACCATGTAAGTGACAATAAAGCTCCGAACAAACTGGTTCCTAATCAGGATACGCCATCTCTCTGCGGTAACCCAGCCAAGAGTGGTGGATTCTCAGAAGAGCCAGAATCTTGTGCCTGTGGAAATGACATCTGTTGTGATCAGGGTACTCTAGTGCCACAGAACCAAAGCGAAAGAAATTTCATCGGATGGATGCTGAGGAAGTGGGAGCATCAGGAGAGAAAGATTGATCGTGAGGTTGCCTCGGAATCTGTTAAAAAGCAAGAAGGAAGCATGAAGAGGTGGGACTTCGTTGATAAGGTTCTTTTGGGTGGAGTATCTATCAGCATCTTGACGATTATATCTCTAGTAGCAGCTCTTATGTATAGAATTGTTTGGGCACAATAAAAGGCTGCTAACAGTTTGTAATAGTTTCCGAATCCAATTGTTATTCCAAAAAAAATTTTGACTTGTACAAATTGCTAAGATTTGATCGAGTAGTGTTTAACATGTATCAACAATTGATCACCTCACATCGTAGTTGTATTGTATCGAAATAATATGATTAATAATAGAGAATTGTTTTGGAACTTAATTTATCAGAACCA 2085 0.4192 MEDIEDLLIGSRNASPQGFRLPLAAAVGVGSKRNQLSCSSPSSAIPGTQSIYIKTFGCSHNQASATSHPLSDSEYMAGQLTAFGYSLSDNPEQADLWLINTCTVKSPSQSAMDTIITKGKSSNKPLVVAGCVPQGSRDLKELEGISIVGVQQIDRVVEIVEETLKGHEVRLLTRKKLPSLDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVKSVISEGVKEIWLSSEDTGAYGRDIGVNLPTLLNSLVAELPADASTMLRIGMTNPPYILEHLKEIAEILRHPCVYSFLHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPEMQIATDIICGFPGETDEDFVQTINLIKEYKFPQVHISQFYPRPGTPAARMKKVPSNVVKRRSRELTAVFESFTPYSGMEGKVERIWITDIASDGVHLVGHTKGYIQVLVLAANHMLGTSAMVKITSVGRWSVFGEVIETVHHVSDNKAPNKLVPNQDTPSLCGNPAKSGGFSEEPESCACGNDICCDQGTLVPQNQSERNFIGWMLRKWEHQERKIDREVASESVKKQEGSMKRWDFVDKVLLGGVSISILTIISLVAALMYRIVWAQ 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00108 611 SFLD Radical SAM 135 404 IPR007197 GO:0003824|GO:0051536
Pste1g00108 611 SUPERFAMILY Radical SAM enzymes 180 414 - -
Pste1g00108 611 ProSiteProfiles Methylthiotransferase N-terminal domain profile. 49 165 IPR013848 GO:0035596|GO:0051539
Pste1g00108 611 Gene3D tm_1862 like domain 188 418 IPR023404 -
Pste1g00108 611 ProSiteProfiles TRAM domain profile. 419 481 IPR002792 -
Pste1g00108 611 SMART MiaB 190 410 IPR006638 GO:0003824|GO:0051536
Pste1g00108 611 CDD Radical_SAM 194 398 - -
Pste1g00108 611 PANTHER RADICAL SAM PROTEINS 1 607 - -
Pste1g00108 611 SFLD B12-binding domain containing 135 404 - -
Pste1g00108 611 ProSiteProfiles Radical SAM core domain profile. 186 419 IPR007197 GO:0003824|GO:0051536
Pste1g00108 611 ProSitePatterns Methylthiotransferase radical SAM domain signature. 194 214 IPR020612 GO:0051539
Pste1g00108 611 NCBIfam MiaB/RimO family radical SAM methylthiotransferase 51 475 IPR005839 GO:0006400|GO:0016740|GO:0051539
Pste1g00108 611 Gene3D - 50 178 IPR038135 -
Pste1g00108 611 Pfam Uncharacterized protein family UPF0004 51 137 IPR013848 GO:0035596|GO:0051539
Pste1g00108 611 FunFam threonylcarbamoyladenosine tRNA methylthiotransferase isoform X2 190 420 - -
Pste1g00108 611 Pfam Radical SAM superfamily 197 369 IPR007197 GO:0003824|GO:0051536
Pste1g00108 611 NCBIfam tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase 51 480 IPR006466 GO:0035598|GO:0035600
Pste1g00108 611 FunFam threonylcarbamoyladenosine tRNA methylthiotransferase 50 177 - -