Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00106 GCAGAAGCAGCAGCAGAAGGTGCTGAGAAATGGGAAAGATGTCTAGTTGTTTGTGTTCTGATTCAAGCTGAAGCTCAACCAGGATTCATCAGCATAGATTGCGGAGCTCCTGCAGGTGTTAACTATTCTGACATTGATACAAGCATAAACTATATATCAAACACAAATTTCATAAATACTGGTTTGAGTAGAACAATAGCATCAGAACTAAGAAGTAATCGACAACAATATTTTTTTAGGCTTAGAAGCTTCCTGGATGGAAAAAGAAACTGCTACAAAATAAATATCATCAGAGGATCCAAATACCTCATTCGGTTTTTTTATGGAAATTATGCTAGTCAAAATATGTTACCACAATTTGATCTTCTTCTTAGGGCTAATCTGTGGAATAGAGTGAATATATATAAAGCATCCCAAGGCAAATTTGAGGAGATCATATATGTACCTCCACTGGATTACATACAAATTTTTTTAGTAAACACCGACATTGGGAAACCATTTATATCATGTATAGAATTGAGGACTTTGATAAATGATACATATGTCACTGAATCAGAATCATTGGAATATTACTGGCAATGTGATTTAGGTAAATGCATGCTTCGGAACTCTACCTATGAACATTCTGCATGCATTAAAAGATCAATTGATTCAATTAAACTTATTATCGTTTTTGCAAATGAATACCATCCACCAACTATTGCCATGAACACAATAGTTACACCAACAAATTGCTCCATTATTGAGAGCACATCATCCTTCGGTAGGAAAGAAATTAAATATTCACTTGAGATGGCAAAAAATTCAACCTTGCCTCCCATCATTAGTGCCTTTCAAATTTACAAAGTCAAAGAATTTCTACAATTAGATACATTCCAAGCAGATGTTGATGCTATTACAACTGTGAAGTCAATTTATGGATTGACAGGAGATCAACAAGGTGATCCATGTAGTCCTTTAGATTACTTATGGGATGGTTTGAATTGTACTTATGTTGAAAGTCATTCTCCTAGAATGACAACTTTATTGGTTGTGAAAAATAGGAATTTATCTTCAAATGGATTGTCAGGAAAGATAGATCCTTCAATTTCAAATTTGACAATGTTGGAGAAGTTAAAGTTGGAGAAGAACAACCTTTCTAGTACAATTCCATCAACACTTAGAAAAGGTTTCTTATCACTAAGTTATCTTTCAATCACACATGATGAGGGAAAGAAAAAGAACATCATTATACCTTTAGCAACATCAATTAGTGGGGTTGTGATCATTCTAGTGATCGTGGCAGCTATATTATGGAATATTAAAAGAAGAAACTTGAATAAAGCTATGGTGGTGGAGAACAATCAAAGTCAGATCTCATCACAATACAAAGAACAAGATGATTTATCATTGCAATCCAAAAAGAAAATATATTCATACTTCGATGTTCTTAAAATCACCAACAATTTCAATACAGTTAAACTTCTATTGAGAGTTCATCATAAAAATTTGATCTCCCTTGTTGGCTATTGCAATGAAGGAAATAATAAGAGTCTCATATATGAGTATATGGCTAATGGAAACTTACAAGAATATCTCTCAAGTAAACATAGCAAAATAAAATTCTTTAGCTGGGAAGATAGACTTCATATAGCAGTACATGCAACATTAGGTTTGGAGTATCTACAAAATGTTTGTACGCTGCCTATTATTCATAGAGACATAAAATCTGCAAACATCTTGTTGAATGAACATTTTCAAGCAAAGCTATCTGATTTTGGTCTATCCAAAATTATTCCACCAAATGGGGGAACACATGTGTCAACTGTTATTGCTGGTACTCCTGGTTATCTAGACCCTGAGTGCTACAAAACTAATAGATTAATAGAGAAAGGTGATATTTATAGCATTCGTGTTCTTCTTTTGGAGATAATCATAAGTCAACTAGTGATAATGAAGAATCAAGAAATGATTCACATGAATCAATGAGTTAGCTCATTAGTTGCAAAGGCGATATCAAGGCTATTATTGATCAGATTAGAAGAAAATTTTGATAGTAACTGAGTTTGAAAAACAGTCGAAATAGCAATGGCATGTGTGTCTCCAAACCCCAATAAAAAACCAATCATAAGTATGATAGTGAGCGATGGAATTAGCTAGAAGTAAAAATAAAGGTGCTTATGCAAGAGATTCAATTAATCCGATCCCCATAAATATAAGTGCCGAATTTATTCCCCTGGCCAGGTAATTCCTTGCCCTTGATAGGATGACTATAATCTTATAGTAAGATGTGATTAAATATTGAGATAAGTAGGGTTAGTGATTTTGTTTTAGCAATGAAATCAAGCTACACAAGTGAAAGTGGTGTTTCACAAGTATTGAATATGTATAAAATAAATGCTGAGCAATAAGTGTACGGTTACTTTTCGTTCG 2412 0.3342 AEAAAEGAEKWERCLVVCVLIQAEAQPGFISIDCGAPAGVNYSDIDTSINYISNTNFINTGLSRTIASELRSNRQQYFFRLRSFLDGKRNCYKINIIRGSKYLIRFFYGNYASQNMLPQFDLLLRANLWNRVNIYKASQGKFEEIIYVPPLDYIQIFLVNTDIGKPFISCIELRTLINDTYVTESESLEYYWQCDLGKCMLRNSTYEHSACIKRSIDSIKLIIVFANEYHPPTIAMNTIVTPTNCSIIESTSSFGRKEIKYSLEMAKNSTLPPIISAFQIYKVKEFLQLDTFQADVDAITTVKSIYGLTGDQQGDPCSPLDYLWDGLNCTYVESHSPRMTTLLVVKNRNLSSNGLSGKIDPSISNLTMLEKLKLEKNNLSSTIPSTLRKGFLSLSYLSITHDEGKKKNIIIPLATSISGVVIILVIVAAILWNIKRRNLNKAMVVENNQSQISSQYKEQDDLSLQSKKKIYSYFDVLKITNNFNTVKLLLRVHHKNLISLVGYCNEGNNKSLIYEYMANGNLQEYLSSKHSKIKFFSWEDRLHIAVHATLGLEYLQNVCTLPIIHRDIKSANILLNEHFQAKLSDFGLSKIIPPNGGTHVSTVIAGTPGYLDPECYKTNRLIEKGDIYSIRVLLLEIIISQLVIMKNQEMIHMNQ 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00106 655 SUPERFAMILY Protein kinase-like (PK-like) 482 644 IPR011009 -
Pste1g00106 655 SMART serkin_6 456 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00106 655 PANTHER OS07G0107800 PROTEIN-RELATED 30 647 - -
Pste1g00106 655 Pfam Malectin-like domain 32 202 IPR024788 -
Pste1g00106 655 Gene3D Transferase(Phosphotransferase) domain 1 518 655 - -
Pste1g00106 655 SUPERFAMILY L domain-like 315 401 - -
Pste1g00106 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 563 575 IPR008271 GO:0004672|GO:0006468
Pste1g00106 655 Gene3D Phosphorylase Kinase; domain 1 458 517 - -
Pste1g00106 655 ProSiteProfiles Protein kinase domain profile. 407 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00106 655 Gene3D Ribonuclease Inhibitor 295 410 IPR032675 -
Pste1g00106 655 Pfam Protein kinase domain 480 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00106 Pste-Chr1 427752 435154 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00106 16 653 Receptor kinase-like Gene Family AT2G19210 34.678 6.41e-132 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pste1g00106 Pkinase 9.8e-29 CL0016