Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00098 ATGGATGGAACAATATTCACTATGGCATCAACATATTCCTTTTTCATACTGTTACTGCTAAGCTTCAAATCACTTGATACAAAGGCACAATCACCCAACTATATGGGAGATGACTGCCACAACACCACACAAAAATCACTCAGCAGTGCTTACCAAACAAACCTTAACAGCATCCTCTCTTGGTTATCCACAGATGCAGCCACAAGCAAAGGCTATAACCACAGCATCTTTGGTAACAACGCTTCTGATGCTGTGTATGGCCTCTATGATTGCCGAGGTGATATAGTTGGATACTTTTGTCAATTCTGTGTCTCTACTGCAGTCAGAGAACTTCTTCAGCGCTGCCCCAATAGAGCTTCTGGTTTCATATGGTATGATTTCTGCATGCTGAAGTACTCTAATGAGAACTTCTTTGGGAATGTTACAGTGTACCCAACATGGCATGTTGCTGGAACAAAAGAAGTGTCTAGTGCAAAAGAGATTCAGAAAGGTCAGGATTTTATGAGAAGCTTGATCAGAAAAGCAACTGTGGAGACCAACCAGTTGTTCTATATGGATGGCTTCAATTTGAGTTACACTCAGAAAAGGTATGGCTTGGTGCAATGCAGTAGAGATCTCACAAATCAGGGGTGCAGACAATGTTTGGAGACCATGTTAGCACAAATTTCCAAATGTTGTGAACAAAAGTTGGGGTGGTTTGCTGGGTCTGCAAGTTGTCTCATAAAGTATGATGAATATAGGTTCTACCTTTTTCACAATGAATCATCTTCTGGGGCAATTAGGCAAATAGCTAAACCTGGGAGAGATAAGAGGTCAAAAATTTTGATCATTAGCTTCAGTGTCGTGGGATCAATAACTCTACTATGTTTCAGTATATACTGCTTCTGGTTCAGGAAAAGAACTAAAAAAGATGGGCTGACACCTCCTATAATTCGTCTATCTTCATATCAAAATGTTCAAACTGAGGAAACACTGAATACAGACCTGCCTACAATGCCATTAATCACAATTCTACAGAGTACTGATAACTTTTCAGAAGCATCTAAACTAGGGGAAGGTGGCTTTGGCCCTGTTTACAAGGGAATTCTACCGAATGGAAGACAAATTGCGGTCAAAAGACTCTCGCAAACTTCTGGTCAAGGCTCAGAAGAGTTTAAAAATGAAGTAATGTTTATAGCTAAGTTGCAACATCGCAATCTTGTAAGACTTTTGGCATGTTGCTTGGAGGAAAATGAAAAGATACTTGTGTATGAGTATTTGTCCAATTCAAGTCTCGACTTTCACCTTTTTGATGATAGGAAGAGAAGACAACTTGATTGGAACCTAAGACTAAGCATTATCAATGGAATAGCAAAAGGTCTTTTATACCTTCACGAAGACTCGCGACTCAAAATTATTCATAGAGATCTAAAAGCTAGCAACGTTCTACTAGACGATGAGATGAATCCCAAGATATCTGATTTTGGATTGGCTAGATCATTTGTAAAGGGTCAGAATCAAGCAAATGCAAATCGAGTAATGGGCACTTATGGATACATGGCTCCAGAGTATGCTATGGAAGGATTATTTTCCGTGAAATCTGATGTTTTTAGTTATGGAGTTCTTGTTCTAGAAATTATTTGTGGGAGAAAGAACAGTAGATTCTACCTATCAGAATATGGTCAAAGTCTTCTTTTATATGCTTGGAAACTGTGGTGTGATGGAAGATGTTTGGAATTAACAGACCCAGTGCTTGAAAAATCTAACATAGACAGGGAAGTTGCGAAGTGCATCCACATTGGCCTGTTGTGTGTTCAAGAAAATGCAGCACATAGACCAACAATGTCCAATGTTGTTGTAATGCTAGCAAGTGACACAATGGTCTTTCCAAAACCTAACCAGCCAGCATTTTCTGTTGGAAGAATGACATTAGAAGAAGCATTAGATGCATCTACTTCAAAAAGTTCTAAAAATCTTTCCATTAATGATGTAACATTATCTACCATTTTGCCAAGGTAACTGAAACTTTGGATACCAGTTTCTTTTCTTTGTTACTTTTTATTGGCAATCAAACTAGAATACCAAATGACAAGGAAGTCAAGGC 2083 0.3865 MDGTIFTMASTYSFFILLLLSFKSLDTKAQSPNYMGDDCHNTTQKSLSSAYQTNLNSILSWLSTDAATSKGYNHSIFGNNASDAVYGLYDCRGDIVGYFCQFCVSTAVRELLQRCPNRASGFIWYDFCMLKYSNENFFGNVTVYPTWHVAGTKEVSSAKEIQKGQDFMRSLIRKATVETNQLFYMDGFNLSYTQKRYGLVQCSRDLTNQGCRQCLETMLAQISKCCEQKLGWFAGSASCLIKYDEYRFYLFHNESSSGAIRQIAKPGRDKRSKILIISFSVVGSITLLCFSIYCFWFRKRTKKDGLTPPIIRLSSYQNVQTEETLNTDLPTMPLITILQSTDNFSEASKLGEGGFGPVYKGILPNGRQIAVKRLSQTSGQGSEEFKNEVMFIAKLQHRNLVRLLACCLEENEKILVYEYLSNSSLDFHLFDDRKRRQLDWNLRLSIINGIAKGLLYLHEDSRLKIIHRDLKASNVLLDDEMNPKISDFGLARSFVKGQNQANANRVMGTYGYMAPEYAMEGLFSVKSDVFSYGVLVLEIICGRKNSRFYLSEYGQSLLLYAWKLWCDGRCLELTDPVLEKSNIDREVAKCIHIGLLCVQENAAHRPTMSNVVVMLASDTMVFPKPNQPAFSVGRMTLEEALDASTSKSSKNLSINDVTLSTILPR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00098 665 Pfam Protein tyrosine and serine/threonine kinase 348 614 IPR001245 GO:0004672|GO:0006468
Pste1g00098 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Pste1g00098 665 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Pste1g00098 665 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 37 661 - -
Pste1g00098 665 FunFam Cysteine-rich receptor-like protein kinase 28 35 136 - -
Pste1g00098 665 SUPERFAMILY Protein kinase-like (PK-like) 318 615 IPR011009 -
Pste1g00098 665 FunFam Cysteine-rich receptor-like protein kinase 10 311 419 - -
Pste1g00098 665 ProSiteProfiles Protein kinase domain profile. 344 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00098 665 Gene3D - 146 248 IPR038408 -
Pste1g00098 665 Gene3D - 33 137 IPR038408 -
Pste1g00098 665 Pfam Domain of unknown function (DUF3403) 617 665 IPR021820 GO:0004674
Pste1g00098 665 Gene3D Phosphorylase Kinase; domain 1 310 419 - -
Pste1g00098 665 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
Pste1g00098 665 FunFam Cysteine-rich receptor-like protein kinase 10 145 248 - -
Pste1g00098 665 FunFam cysteine-rich receptor-like protein kinase 10 420 622 - -
Pste1g00098 665 Gene3D Transferase(Phosphotransferase) domain 1 420 622 - -
Pste1g00098 665 Pfam Salt stress response/antifungal 166 246 IPR002902 -
Pste1g00098 665 Pfam Salt stress response/antifungal 39 134 IPR002902 -
Pste1g00098 665 SMART serkin_6 344 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00098 665 CDD STKc_IRAK 350 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00098 Pste-Chr1 410664 414113 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00098 10 665 Receptor kinase-like Gene Family AT4G05200 40.762 9.72e-177 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g00098 PK_Tyr_Ser-Thr 2.8e-47 CL0016