Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00085 CATATTTATATTCAAACAAGAAGAAGCGACCTGTATCTTTCACCAACAGCTACACTCTCTCCCCTTCCACTCTCCACTGCAGCTTCAACTTGCGGCGACTTCTCCGATCGATTTCCGGCGAAACATCAACGGCATCCATGGCCACAGAATGAGTATCCGCCGATCACCATGTCGATCTCCTGCTCCAACTGCTGTCCCGATTCGTTCCTCCTCTGTGGCGAGGCCACCTCCGAAATCTTGTCTGTAGATTTGCCGAAATGTTCCTCCGACCTCGATTCCTCATCGCCGTCGGAGGCGGAATCCATCGCCGGATTCATTGAAGACGAGCGCCACTTCGTTCCTGGATTTGATTACCTCAACAGGTTCCAATCTCGCTCTCTTGACGCTTCTGCTAGAGAAGAATCTGTTGCATGGATTGTCAAGGTGCAGGCTTATTACGCTTTTCAACCTCTCACGGCTTATCTTTCCGTTAACTACATGGATCGGTTCTTGAATTCTCGTTCATTGCCGCAAACGAATGGGTGGCCTCTGCAACTTCTATCAGTTGCGTGCTTGTCTTTAGCGGCAAAGATGGAGGAACCTCTAGTTCCGTCTCTGTTGGACCTTCAGGTAGAAGGTGCCAAATACGTATTTGAGCCCAGAACAATTAGAAGAATGGAGCTACTTGTTTTGGGTGTCTTGGACTGGAGACTAAGATCGGTTACTCCGTTTAGCTTCCTCGATTTCTTTGCATGCAAGTTAGATTCAACTGGAACATTTACTAGCTTCCTCATTTCACGTGCTACACAAATTATCTTATCTAATATCCAAGAGGCTAGCTTTCTTGCCTATTGGCCATCATGCATTGCTGCCGCGGCCATTCTCCATGCAGCTAACGAAATTCCTAATTGGTCTCTCGTTAGGCCTGAGCATGCAGAGTCATGGTGCGAGGGCCTTAGAAAGGAGAAAATTATAGGGTGCTACCAATTAATGCAAGAACTTGTGATTGACAATAACCGGAGCAAACCCCCTAAAGTGTTACCACAGCTGCGAGTGACATCTCGGCCCCTTATAAGGTCTAGTGTTTCATCATTCTCAGAATCATCCTCTTCTCCTTCATCCTCTTTGTCTTGTAAAAGGAGGAAATTAAATAACTGTTTGTGGGTAGATGATGACAATGGAAACACCCGGTGAAGAAAAAAAGAACAGTAATAAAGGGAAGAAAAAACAGAATGGAATAAGGTGGTGGACGGTGGTCCAAGTTGTCCAGAAACCTCAACATTTTTTAGAGGGTTTGAAATTTTAAATTGAGTAGAGTCAAGGTGTACATTATAATATAGACTATATTTCATGAGAGTTGTGAGCTTTTATTATGTTATTATTGTTTTGTTGGTGGGTGTCGCCATTCATCAATGGCCTTGCAGATTCCCTAGGGAAGGGGATTTTGCAACATAAATATATTGTTGTCGAAAAGTGTGTCTGGGTGTGAGTGAGTGAGAGAGGTGGAAAAATATACAAAGATGCATTTAATGGTTCGGTCGTGCAAGTGTGGAAGAAAGAAGTGGGGGAGTTTCAAAGATGCGCTGGTTATTGGTGGAGGGAAGAGGTTGGTGGGACATTACTTCAGAGCTTGGAAGAAAAAAGAAAGCAGAGTCACATAGCAGATATCAATAGGGTATTGAAACTTTGAAGTTTGAGCTGTTTCTTATAATGAGATTTCTAAGTCAAGCTTCTCATCTTGGCCAGCATCTTCACTTCTTCTATTTACACGTTACTTTTGATCGTCTGATGGGATACCACTAGAGTACAAAAAAGAAATAGCAATAAGGTGAAGCTTGCCACATTTTGTGGACTTTTTTCTTATGATACGCGTGAGATGCATCTGGTTCGTTCTCGCACGTGCGCATGTGTGATTTATTTTTAGTTATGGCGGGAATTGTTTTTTATTTCTTTTTTTTTTTTTAATTTTCGGCTTGAGCTTTGCCCTAACTATACAGGAACCATTGCCTGGTCCTCGCGTGATGGAAACACGTGTCTATAGCTTTACCCTTTTTTAGATTTTTTTATTTGTTTTCGAGAGAGGAGAAAAATCCTCCATTATATATTGCCAAATTGGCTTTGGTAGAAATGGGAGAAAAGGTCTTTGGGGCCTTTTCCTGCGTGCTTTGTATTGAATTCATCAATAATGAT 2169 0.4269 MSISCSNCCPDSFLLCGEATSEILSVDLPKCSSDLDSSSPSEAESIAGFIEDERHFVPGFDYLNRFQSRSLDASAREESVAWIVKVQAYYAFQPLTAYLSVNYMDRFLNSRSLPQTNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYVFEPRTIRRMELLVLGVLDWRLRSVTPFSFLDFFACKLDSTGTFTSFLISRATQIILSNIQEASFLAYWPSCIAAAAILHAANEIPNWSLVRPEHAESWCEGLRKEKIIGCYQLMQELVIDNNRSKPPKVLPQLRVTSRPLIRSSVSSFSESSSSPSSSLSCKRRKLNNCLWVDDDNGNTR 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00085 334 Pfam Cyclin, C-terminal domain 178 284 IPR004367 -
Pste1g00085 334 PANTHER CYCLINS 43 276 IPR039361 -
Pste1g00085 334 ProSitePatterns Cyclins signature. 76 107 IPR006671 -
Pste1g00085 334 Pfam Cyclin, N-terminal domain 48 175 IPR006671 -
Pste1g00085 334 Gene3D - 50 239 - -
Pste1g00085 334 Gene3D - 59 176 - -
Pste1g00085 334 SUPERFAMILY Cyclin-like 39 175 IPR036915 -
Pste1g00085 334 CDD CYCLIN_AtCycD-like_rpt1 75 173 - -
Pste1g00085 334 SUPERFAMILY Cyclin-like 160 280 IPR036915 -
Pste1g00085 334 CDD CYCLIN_AtCycD-like_rpt2 178 268 - -
Pste1g00085 334 FunFam D2/4-type cyclin 59 176 - -
Pste1g00085 334 SMART cyclin_7 81 169 IPR013763 -
Pste1g00085 334 SMART Cyclin_C_2 178 311 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00085 Pste-Chr1 350184 354021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00085 1 333 Core Cell Cycle Gene Families AT1G70210 62.647 9.25e-137 390
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00085 1 350184 354021 Pste1g00085 1 350184 354021 ECH