Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00084 ATGGAGAGAAAACTACTCAATGGATTCCTATGTTCCTTTATTTTTCTGCTATTGCTAGGCTTCAAAACACTTGTTGCAAAGGCGCAATCACCAAACTATGTGGGAGATGATTGCCAAAACACCACATCAAAACCACTCAACAATGCATACAAAACCAACCTCAACAGTGTCCTTTCATGGCTATCCACAGATGCAGCCACAAGCAAAGGCTATAACCACAACAGTTTTGGCAATAACACCCCTGGTAGTGATGCAGTGTATGGCCTCTATGATTGCCGTGGTGATGTGGTTGGTTACTTTTGCCAATTTTGTGTCTCCACTGCTTCAAGAGAAGTTCTTCAGCGATGCCCCAATAGAGTATCTGCTATTATATGGTATGATTTTTGCATCTTAAGGTACTCTAATGAGAACTTCTTTGGGAATGTTACAGTGTTCCCTTCATGGCATGCTGTTAGACCAGTAAATGTGTCTAGTAAAGATGAGATTCAAAAGGGTTTGGATTTTATGAAAAGTTTGATCAGAAAAGCAACTGTGGAGACCAATTTGTTGTACTATATGGATGGCTTCAATTTGAGTTCCACTCAGAAAAGGTATGGCTTGGTTCAATGCAGTAGAGATCTCACAAATGATGGGTGCAGAGAGTGTTTGGAGGCCATGTTAGCACAAGTTCCAAAATGTTGTCAGCATAATTTGGGGTGGCAAGTTTTGGCTGCAAGTTGTCTCATAAAGTATGATGATTATATTTTCTACCTTTTTCGCACTCAAGCATCTGATTCACAAACAGAGGCCAAACAAAGGGGTGCTAGTATGTGGAGAATATTGATCATTGGCTTAAGTGTGGTGGTGGCAGTAGCTTTACTATGTTTCAGTGTCTATATTTTCTGGTTCAGAAAAAAACATAGAGCAGGAAGAAGAAAAGATGTGAGAATATCTGATAACATTCATACATCATATCACAATGTTGAAACTGAGGAATCATTGAATCTAGACCTTCCTACGATCCCATTAATCACAATTCTTGAGAGTACTGATAACTTTTCACTAGCTTCTAAACTAGGAGAAGGTGGATTTGGACCTGTTTACAAGGGAACTCTACCAGATGGAAGACAAGTTGCAGTCAAAAGACTCTCAGAAACATCAGGTCAAGGCTCACAAGAGTTCAAGAATGAAGTGATGTTTATAGCTAAATTACAACATCGCAACCTTGTAAGACTTTTGGCATGTTGCTTGGAGGAAAATGAAAAGATACTTGTATATGAGTATATGTCAAATGCAAGTCTTGACTCTCTTCTATTTGATGAGAAAAAGAAAAGGCAACTCAATTGGAATCTACGATTAAACATTATTAATGGCATAGCTAAAGGTATTTTGTACCTTCACGAGGATTCAAGGCTCAAAGTTATCCATAGAGATCTCAAAGCTAGTAATGTTCTATTAGACGATGAGATGAATCCTAAAATATCAGATTTTGGATTAGCAAGGGCATTTGAAAAAGGACAGAACCAGGGTAATACAAACCGAGTAATGGGAACCTATGGATACATGGCTCCAGAGTATGCTATGGAAGGATTCTTTTCAGTAAAATCTGATGTCTTCAGCTATGGAGTTCTTGTTCTAGAAATCATTTGTGGGAGAAAAAACAGTGGATTCTATCTTTCAGAATGTGGTCAAAGTCTTACTTTATATGCTTGGAAAATATGGTGCGCAGGAAAATGTTTGGAACTAATGGATCCAGTGCTAGAGGAATCTTGCATGGAGAGTGAAGTTGTGAAGTGCATCCACATTGGCCTGTTGTGTGTTCAAGAAGATGCAGCAGATAGACCAACAATGTCCAATGTTGTTGTAATGCTAGCAAGTGACACAATGTCTCTTCCAAAACCGAACCAGCCAGCATTTTCAGTTGGAAGAATGACCTTCGAGGATGCATCTACATCCAAAAGTTCCAAGAATTCTGTTAATGATGTAACAGTTTCCAAAGTTTTACCAAGGTAATGGAAACTTGGACATATACAAACCTCTTTTCTTTGTTGCTTTAGAAGGGAATCATATCATACTTCAAGACAAAATGATCAAGAAATGAAGACTTTCCAGATTTATAAAACTAATTATACCAACGTGTTGACCCTATTGTTGTCTGAATAAAGAGTACAGGACTTATGTATCACTGTAAACAAATTTATCATGATTAATCTATCATGTAAAACTTTTTTTCACTTTTAGTGTATAAATCTTTTTCTCTTAAATAAAATATCACCGCTCACTTTGTACTATGTCTTTCTTTTTTTTTCTAGTGAACCCATATATAAATTGTA 2312 0.3728 MERKLLNGFLCSFIFLLLLGFKTLVAKAQSPNYVGDDCQNTTSKPLNNAYKTNLNSVLSWLSTDAATSKGYNHNSFGNNTPGSDAVYGLYDCRGDVVGYFCQFCVSTASREVLQRCPNRVSAIIWYDFCILRYSNENFFGNVTVFPSWHAVRPVNVSSKDEIQKGLDFMKSLIRKATVETNLLYYMDGFNLSSTQKRYGLVQCSRDLTNDGCRECLEAMLAQVPKCCQHNLGWQVLAASCLIKYDDYIFYLFRTQASDSQTEAKQRGASMWRILIIGLSVVVAVALLCFSVYIFWFRKKHRAGRRKDVRISDNIHTSYHNVETEESLNLDLPTIPLITILESTDNFSLASKLGEGGFGPVYKGTLPDGRQVAVKRLSETSGQGSQEFKNEVMFIAKLQHRNLVRLLACCLEENEKILVYEYMSNASLDSLLFDEKKKRQLNWNLRLNIINGIAKGILYLHEDSRLKVIHRDLKASNVLLDDEMNPKISDFGLARAFEKGQNQGNTNRVMGTYGYMAPEYAMEGFFSVKSDVFSYGVLVLEIICGRKNSGFYLSECGQSLTLYAWKIWCAGKCLELMDPVLEESCMESEVVKCIHIGLLCVQEDAADRPTMSNVVVMLASDTMSLPKPNQPAFSVGRMTFEDASTSKSSKNSVNDVTVSKVLPR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00084 663 CDD STKc_IRAK 352 617 - -
Pste1g00084 663 Pfam Domain of unknown function (DUF3403) 619 663 IPR021820 GO:0004674
Pste1g00084 663 ProSiteProfiles Gnk2-homologous domain profile. 144 249 IPR002902 -
Pste1g00084 663 Gene3D - 148 249 IPR038408 -
Pste1g00084 663 Gene3D - 32 138 IPR038408 -
Pste1g00084 663 SMART serkin_6 346 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00084 663 Pfam Protein tyrosine and serine/threonine kinase 348 616 IPR001245 GO:0004672|GO:0006468
Pste1g00084 663 Pfam Salt stress response/antifungal 38 135 IPR002902 -
Pste1g00084 663 Pfam Salt stress response/antifungal 189 247 IPR002902 -
Pste1g00084 663 ProSiteProfiles Gnk2-homologous domain profile. 32 138 IPR002902 -
Pste1g00084 663 Gene3D Transferase(Phosphotransferase) domain 1 422 628 - -
Pste1g00084 663 Gene3D Phosphorylase Kinase; domain 1 308 421 - -
Pste1g00084 663 ProSiteProfiles Protein kinase domain profile. 346 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00084 663 SUPERFAMILY Protein kinase-like (PK-like) 331 647 IPR011009 -
Pste1g00084 663 FunFam Cysteine-rich receptor-like protein kinase 10 147 249 - -
Pste1g00084 663 FunFam Liguleless narrow1 422 625 - -
Pste1g00084 663 MobiDBLite consensus disorder prediction 644 663 - -
Pste1g00084 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Pste1g00084 663 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 311 421 - -
Pste1g00084 663 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 33 659 - -
Pste1g00084 663 FunFam Cysteine-rich receptor-like protein kinase 28 34 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00084 Pste-Chr1 346321 349856 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00084 13 663 Receptor kinase-like Gene Family AT4G05200 40.943 3.49e-174 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g00084 PK_Tyr_Ser-Thr 5.1e-50 CL0016