Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00075 ATGGGTTCAAGTGCAGCTCCTCCTCTGATGCAGGTTGTTGTATTATACGGAGGGAGAGGGAAATGTTTTAGTGGTCCATCTCGTTTGCGGGTGAACGCCTCACGCAGGGCACCCCCTGGAGTGGACACCAGAATCCATTGGGACAACGAAGATGATGGTTGGATTGGAGCCAACGCCAAACAACAAACCCAAAATAACATCTTCTCCCCTAATCTGCTCACAAATTCTTTAGGCTCCCATTATGAGTCAGTACCCACTACTCTCTACTCACTGCATGCTCGCTTTCCTATATTCCTTGGAGTGTCTCCCGACGCCGATTTAGAAGAAATCAAAGTTGCTTACCGGAAACTATCAAAGGAGTATCATCCCGACACAACATCCCTCCCTCTGAAAACAGCCTCAGAAAAATTCATGAAATTAAGAGAGGTTTACAACGTGCTGAGCGACCCAGAGAGTAGACAGTTTTATGATTGGAGCCTGGCTCAGGAGGCTGCAAGCCGGCACGCAGAGAAGATGAAATTAGAGGATCCTCGGGAGCAGCAACTCAAGAACTGGGAACCTGTTCCTGACATGGTTGACCGCCTTCGTGGAAGGAATATGAAGCTTAGTGATCAGGCTGTTTCTGCCATCACCATTGATCTTTTTATCATTCTTTTTTCCATATGCTGCATCATCTATGTTCTTTTCTTTAAAGCACCATATTACTACTAG 711 0.4627 MGSSAAPPLMQVVVLYGGRGKCFSGPSRLRVNASRRAPPGVDTRIHWDNEDDGWIGANAKQQTQNNIFSPNLLTNSLGSHYESVPTTLYSLHARFPIFLGVSPDADLEEIKVAYRKLSKEYHPDTTSLPLKTASEKFMKLREVYNVLSDPESRQFYDWSLAQEAASRHAEKMKLEDPREQQLKNWEPVPDMVDRLRGRNMKLSDQAVSAITIDLFIILFSICCIIYVLFFKAPYYY 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00075 236 Gene3D DnaJ domain 97 205 IPR036869 -
Pste1g00075 236 ProSiteProfiles dnaJ domain profile. 94 160 IPR001623 -
Pste1g00075 236 Pfam DnaJ domain 98 157 IPR001623 -
Pste1g00075 236 ProSitePatterns Nt-dnaJ domain signature. 137 156 IPR018253 -
Pste1g00075 236 SUPERFAMILY Chaperone J-domain 98 161 IPR036869 -
Pste1g00075 236 SMART dnaj_3 93 152 IPR001623 -
Pste1g00075 236 PRINTS DnaJ domain signature 132 152 IPR001623 -
Pste1g00075 236 PRINTS DnaJ domain signature 114 129 IPR001623 -
Pste1g00075 236 PRINTS DnaJ domain signature 96 114 IPR001623 -
Pste1g00075 236 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 32 234 IPR044618 -
Pste1g00075 236 FunFam DnaJ homolog subfamily C member 4 81 181 - -
Pste1g00075 236 CDD DnaJ 99 149 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00075 Pste-Chr1 327950 328719 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00075 99 162 C2H2 Transcription Factor Family AT1G74250 36.765 9.90e-07 47.4