Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00069 ATGAAGAGAGAAGGTGAACGCCTCACGCAGGGCACCCCTGGAGTGGACACCAGAATCCATTGGGACAACGAAGATGATGGTTGGATTGGAGCCAACGCCAAACAACAAACCCAAAATAACATCTTCTCCCCTAATCTGCTCACAAATTCTTTAGGCTCCCATTATGAGTCAGTACCCACTACTCTCTACTCACTGCATGCTCGCTTTCCTATATTCCTTGGAGTGTCTCCCGACGCCGATTTAGAAGAAATCAAAGTTGCTTACCGGAAACTATCAAAGGAGTATCATCCCGACACAACATCCCTCCCTCTGAAAACAGCCTCAGAAAAATTCATGAAATTAAGAGAGGTTTACAACGTGCTGAGCGACCCAGAGAGTAGACAGTTTTATGATTGGAGCCTGGCTCAGGAGGCTGCAAGCCGGCACGCAGAGAAGATGAAATTAGAGGATCCTCGGGAGCAGCAACTCAAGAACTGGGAACCTGTTCCTGACATGGTTGACCGCCTT 507 0.4813 MKREGERLTQGTPGVDTRIHWDNEDDGWIGANAKQQTQNNIFSPNLLTNSLGSHYESVPTTLYSLHARFPIFLGVSPDADLEEIKVAYRKLSKEYHPDTTSLPLKTASEKFMKLREVYNVLSDPESRQFYDWSLAQEAASRHAEKMKLEDPREQQLKNWEPVPDMVDRL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00069 169 Gene3D DnaJ domain 61 155 IPR036869 -
Pste1g00069 169 Pfam DnaJ domain 72 131 IPR001623 -
Pste1g00069 169 PRINTS DnaJ domain signature 70 88 IPR001623 -
Pste1g00069 169 PRINTS DnaJ domain signature 88 103 IPR001623 -
Pste1g00069 169 PRINTS DnaJ domain signature 106 126 IPR001623 -
Pste1g00069 169 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 9 169 IPR044618 -
Pste1g00069 169 SUPERFAMILY Chaperone J-domain 72 135 IPR036869 -
Pste1g00069 169 CDD DnaJ 73 123 IPR001623 -
Pste1g00069 169 FunFam DnaJ homolog subfamily C member 4 54 155 - -
Pste1g00069 169 SMART dnaj_3 67 126 IPR001623 -
Pste1g00069 169 ProSitePatterns Nt-dnaJ domain signature. 111 130 IPR018253 -
Pste1g00069 169 MobiDBLite consensus disorder prediction 143 169 - -
Pste1g00069 169 ProSiteProfiles dnaJ domain profile. 68 134 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00069 Pste-Chr1 313154 313858 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00069 73 136 C2H2 Transcription Factor Family AT1G74250 36.765 2.61e-07 47.8