Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00059 GTCAACGATTCCTGTCTTGTCGACAAAGCAAACTCGAGAAACCGGAAAGTAAGAGGAAAACGAAAAGGATATTTTTCCGAGGTTTCACCCAGCTTCAGGCTTCACACTTCCATTTTGCACTTTCTCATTTCCAAAACCCTAATCCCAAATTGGCACCGAACGAGACCACGCGGTGGCTAAGAGGTCAATGTTCGGGGGCGGAGGGGACGATGCGCTGGCGGCGCGGCTGGGCATGGTTACGCCGTCGATGCTGAATCCGGCGACGCCGTCGGTCATGTCCGGCGAGGGGTCTGGGGCGGCGACGAGGGAGGAGAGGACCCCTACCCAGCCACAGTGGAGCCAGCTGGAGACGAGGGAGTTCATAGCGATACGCGCGGAGCTGGAGAGGGACTTCACTGCGTCCAAGCGGAACAAGACGCTTTGGGAAGTGGTGAGTGCCAAGATGAGGGAGAGAGGCTTCAGGAGAAGCCCTGAACAGTGCAAATGCAAGTGGAAGAACCTCGTTAATCGATATAAGGGAAAGGAGACATCTGACCCAGAGCATGGTAGGCAATGCCCATTTTTTGAAGAATTGCATGCCGTCTTTACCCAAAGGGCACATAACATGCAACGATTGCTTCTTGAGTCTGAAACTCGTTCTGCTCAAACTAAGAAAGGGGTGAAACGATCAAGTGGAGACCGGTCCTCAGAGGAACTCTCAGAAGATGATGATGAGGTTGAATGTGACAGTGAAGATGAAAAACCTTCCAGAAGCAATACCCGCAAAAGGAAAGTTGACAAAGTTGGAGTGGAGAAGTCTTCAAGAGCAAACAATCCATCAAATGCTGCCAGTAATAGTACTAGTAGTATTCAGGAAATGCTCAAGGAATTTTTCCAGCACCAGTTAAGGATGGAGATGCAATGGAGGGAGATGATGGAGAGGCGTGCTCATGAAAGACAGTTGTTTGAGCAGGAATGGCGGCAGACAATGGAGAAGCTTGAGAGGGAGAGATTAATGATTGAACAGGCATGGAGGGAGAGAGAAGAACAGAGGAGAATGAGAGAAGAGAGTAGGGCAGAAAGAAGGGATGCTTTGTTGACTACCCTTTTGAACAAACTCATTAATGAATCTAACTGACTCAAGCCAATGTCTTGATTCCTTGTAGCTGATTACTTTGTTGTTTCCATTTATTATATAATTATAAGTTTAGCCTATTTCACAGTAGCTTTTGATTACAGAGAATATGGGAAAGGAGAATTTGGTTGATAAAGGGAGGAGTAGTTATAGGGGTATATGAACTTTTTTCTTTTGAAAATTGATACAGAAATAGTTTTTTGTATGGACTATTTAGGGATACTTGCATTTGGCATTTCATCTTGGGACATGTAACTAAAGACAGATATGGATTTTAAGCTGTCTGTATGACTTTTCTTATATCTGTACATATATGTTATAATTATATACAGGGATGACACATTTGTTTAAT 1466 0.4509 MFGGGGDDALAARLGMVTPSMLNPATPSVMSGEGSGAATREERTPTQPQWSQLETREFIAIRAELERDFTASKRNKTLWEVVSAKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHGRQCPFFEELHAVFTQRAHNMQRLLLESETRSAQTKKGVKRSSGDRSSEELSEDDDEVECDSEDEKPSRSNTRKRKVDKVGVEKSSRANNPSNAASNSTSSIQEMLKEFFQHQLRMEMQWREMMERRAHERQLFEQEWRQTMEKLERERLMIEQAWREREEQRRMREESRAERRDALLTTLLNKLINESN 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00059 309 Coils Coil 254 274 - -
Pste1g00059 309 MobiDBLite consensus disorder prediction 21 52 - -
Pste1g00059 309 FunFam Zinc finger and SCAN domain-containing 20 50 111 - -
Pste1g00059 309 ProSiteProfiles Myb-like domain profile. 50 106 IPR001005 -
Pste1g00059 309 CDD GT1 48 113 - -
Pste1g00059 309 PANTHER FI21293P1 33 305 - -
Pste1g00059 309 MobiDBLite consensus disorder prediction 152 167 - -
Pste1g00059 309 Pfam Myb/SANT-like DNA-binding domain 48 131 IPR044822 -
Pste1g00059 309 MobiDBLite consensus disorder prediction 204 219 - -
Pste1g00059 309 Gene3D - 50 111 - -
Pste1g00059 309 MobiDBLite consensus disorder prediction 182 202 - -
Pste1g00059 309 SMART sant 46 108 IPR001005 -
Pste1g00059 309 MobiDBLite consensus disorder prediction 145 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00059 Pste-Chr1 271565 274403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00059 48 304 Trihelix Transcription Factor Family AT2G38250 46.360 8.04e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste1g00059 Myb_DNA-bind_4 4.8e-22 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00059 1 271565 274403 Pste1g00059 1 271565 274403 ECH