Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00051 GATTTTTTGAGTTTTATCTAACGGTTTCGTACAGCGAGGATTTTTTCGGCATCCGTAATTCTGGTGTCAACAAAAATATGTAATGAAGGATTATGCTAGTTATTTAATTTCTGAGATGTAGCCGTGATGTTGATATAAAAGGCGCCAAGTAGATAGCACCGGGTTTAGGGTTTAGGAGAAAGACGCCGAGGAGGAGGAGCTTTGCCGAGAAATGGCGTTTTGGGGAGTGGAAGTAAAGCCGGGAAAGCCTTTTACTCATAAATACGACTCCTCCAAAGGACGCCTCCATATTTCAATGGCCACTTTAGGGTTGGGCACTGCCACAGCAAAAAGCACATTGCAATGCAATGTGGGAAGCAGAAGCCCTGTCTATCTTTGTTCTCTCTATCCTGGAAACACCGAGTCATTGCAATTAAATATAGAGTTCGATGAAGTTGATCAAGTTCTTTTCTCTGTAATTGGTCCTCGGAGCATTCATCTCTGTGGTCACTATCTTTCCACTACCCGCAATACCAATCTTATCGACGACTCGGAATCATATGGGGAGGATATCGCGGATACGGAAACAGAGGGATCTGATTACAGTGATGAAGATGAGTACGAGGATAGTTTTATTGATGATGATGGTGTTCCAGAGGGTTTTTCACCATCTCCTATTTCCAAAGAAGAGGAAGCTTCTCCTGACAAGAAACCAAAAAGTAAGAAGTGCAGCCTTCGGCGGCTCAGGAAGAAATACCTGTCAGTAGAGTCAGACAGTGATGGCAGTTATGAAGAAAAGATAATTGTCAATGACATTATGCATGACCAAACCCAGAAAATTGACAACGAAGATACCCTACCCATTTCATCTCTTTACAAGAATAAAGCCTCTAGAAGGGTCTTGGACCAGGAAATGGATGCTACTGTTAATAGGGGAGCAGGTGATGCCAGCAACAAGAATGGTGAAGATGGTGGAAACAGTATTGTTGAAACAAGTTTAAAGGCTGACCATGTCCTTGTAGAAAGTCAGACACACAGGGAAGCTGAACTGTCAAACCACTTGGTAGATCCTTGCACTGTTCTGGATGTTGATGATTTCAAAAATTTAAAAAAGAAAAAGAAGAGAAAGGAAAAAGAGACAAAGAGTTCCTGGAATGGCCATTCTATCAAACTAGATAATGGTATAGGAGAAGAGCCTAAAATGGAAAAGATGACCCAGGATTTTGTGGCAGAAAATAAACAACAGCAGCATGCTGATGATAAAAACTGCCGTCCATCAGTGACCATTTTCTCCGGTGAAATCAGGGTTGGGTGCGCCTTGTCTAGTGCGACCCAACCCAAGTATCTCCATGGTGACTCTCACACAGTTGTCACTGGAGTTCCTCCTGTCATTTCCAAAGTCGTTGCATCGGTTGCTGAGATGTCGCTGGAGTTGCTGTTGTTTGGCTGTTTTTTAATGGAAACTGAAACCATGGATAAAATACTACCTTCTACTCAGGTTAATCGAGGAGGACAAGGTGAAAAGCCAAAGAGGAAAAGGAAAGGACGGTCTAATGACGGGGTGGTTTCGTTTGCTACTGATGCTTCTCCAAACAATCTTGTCAGTTTGCCTCTGAGAAATGAATACAATAAACAACATACTGTTAATCAGGATGCTAATATTTATGTTGCATTGCCTTCTGAGGCGGACCCTAAAAAGAGTAGAACAAAGAGGAGAAAGAAAGAGGTAAAGAAAAGTGGCAATGGATATCATGAAAATGTCACCCAGGAGGGCAAAGCCAACAGAGATGCAGCAGAGTTGCAGAATCTGATTCATAATTTTTTTGAAGGAAAAGAGCTGCATCAGAAGCTAATTAATGAGAAGAATGTGGACAATGGTGCTCATGACTTTCCTAATGGAAATCAATCTGAAGATAGAAAAGTTAAGAAAAGGAAAAAAATGAGTAAAAGTCAGGGCTATGGGGAAGTTTTAAATTCTGATGTGCCTGTCTGTGAAGAGAGAAATGGTGAGGCTGAGATGATAGAAGAGAGAAGTAAGAAGGATGCAAAGCCTTCCCCAGTTAGAACATTCTCAAATGGATTAGTTATTCAAGAACTAGAAAAGGGGATAAAAGATGGCAAAATTGCTGCTTCTGGAAAAAAGATTAGCATCTATTACACTGGCAAGTTGAAGGAAAATGAAGTAGTGTTCGAGTCAAATGTGGGTCAAGCTCCTTTCAAATTTCGCCTTGGTAAAGCAGAAGTTGTCAAGGGTTGGGATGTTTGCCTTGAAGGCATGCAAGTAGGAGGAAAGAGAAGACTTGTAATTCCACCATCATTGACGTCAGAGAGTGACGGATACTCTGCCAAAATACCATCAAATTCATGGTTGGTTTATGACTTCGAATTGGTTAAAGTTCATTGAATATGTGTGGCTACTTATGTTTTTGGGTGAACACCCAAAAAATTGGAGTGAGGACTGACGAGGCAATACAGGGAACAGGCAAAAACCAACTATCAAAATCAACTGTACACAGTAGCTTTTTTTTGGGTTTGGTTGAACTTGAATCTGTGGTGACCTGACCGGTGATAGTTTTCCTTGTAGAAGATAGTGTTGGTTGACGCGCGGTGCAAAATACCTAGTTTTGATTCTTTTATATAGCGTGTTAAAAATAAAAGATCTTGAGGGAGCGAAAATGCACGCCGACATATATAATGGGCTGGTTTTCTTAGCTAAAGCCTAAAAGTAAGATTTTATGAATGCAATATATACTCTCCAGTATTTGAAATTTTCTGCTGGAGAGATAAAGACAGATTGGGGAGCTTAACACCTGGTGACAGAGTCAGGGTGGCCCGTCATGGAAGAGGTAAATTCCAATTGTTAGATGTACTAGTTTCCATTACAAGTTAACTTATTTTTTGTGTTTGAATTCTATACACCTTTTGCGCCATTTATATCTTTTACTC 2925 0.4075 MAFWGVEVKPGKPFTHKYDSSKGRLHISMATLGLGTATAKSTLQCNVGSRSPVYLCSLYPGNTESLQLNIEFDEVDQVLFSVIGPRSIHLCGHYLSTTRNTNLIDDSESYGEDIADTETEGSDYSDEDEYEDSFIDDDGVPEGFSPSPISKEEEASPDKKPKSKKCSLRRLRKKYLSVESDSDGSYEEKIIVNDIMHDQTQKIDNEDTLPISSLYKNKASRRVLDQEMDATVNRGAGDASNKNGEDGGNSIVETSLKADHVLVESQTHREAELSNHLVDPCTVLDVDDFKNLKKKKKRKEKETKSSWNGHSIKLDNGIGEEPKMEKMTQDFVAENKQQQHADDKNCRPSVTIFSGEIRVGCALSSATQPKYLHGDSHTVVTGVPPVISKVVASVAEMSLELLLFGCFLMETETMDKILPSTQVNRGGQGEKPKRKRKGRSNDGVVSFATDASPNNLVSLPLRNEYNKQHTVNQDANIYVALPSEADPKKSRTKRRKKEVKKSGNGYHENVTQEGKANRDAAELQNLIHNFFEGKELHQKLINEKNVDNGAHDFPNGNQSEDRKVKKRKKMSKSQGYGEVLNSDVPVCEERNGEAEMIEERSKKDAKPSPVRTFSNGLVIQELEKGIKDGKIAASGKKISIYYTGKLKENEVVFESNVGQAPFKFRLGKAEVVKGWDVCLEGMQVGGKRRLVIPPSLTSESDGYSAKIPSNSWLVYDFELVKVH 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00051 723 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 631 720 IPR001179 GO:0003755
Pste1g00051 723 Gene3D Nucleoplasmin core domain 1 100 - -
Pste1g00051 723 MobiDBLite consensus disorder prediction 481 516 - -
Pste1g00051 723 SUPERFAMILY FKBP-like 598 722 - -
Pste1g00051 723 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Pste1g00051 723 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 635 723 IPR001179 GO:0003755
Pste1g00051 723 MobiDBLite consensus disorder prediction 105 166 - -
Pste1g00051 723 MobiDBLite consensus disorder prediction 109 138 - -
Pste1g00051 723 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 722 - -
Pste1g00051 723 MobiDBLite consensus disorder prediction 294 317 - -
Pste1g00051 723 MobiDBLite consensus disorder prediction 546 575 - -
Pste1g00051 723 MobiDBLite consensus disorder prediction 419 446 - -
Pste1g00051 723 Gene3D - 587 723 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00051 Pste-Chr1 254700 279588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00051 634 721 Calmodulin-binding Proteins AT3G25230 37.079 8.07e-11 63.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00051 1 254700 279588 Pste1g00051 1 254700 279588 ECH