Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00050 ATGACTACAAAGGTAATAACACCAGATGGGGCAGATGACTTTGAGGCCAACGGCTCTGGCCTCGAGCTGAGAGCCCTTTGGCTTCTGATTCTTCTCCGCGTTTCGCCTCTGCGCTTCGATCTTCTGCTTTCCTCTTGTCATCTTTTTTTCTCTTTGGGGCCAAGTGTGTCTAAACTTGAAATTCCAAGAAGAACACAGAAATATGAAGAAGAATGGGGAGAGGTCGCCATCTACAACAAGAGGCTACCACCAAGTCCTCCAACCTTACCCTTCATAGGTAACATATTTTGGCTCCTTAAGTCGTCAAAAAACTTTGCTGATCTTGAACCTGTTCTTCGCTCTTTACGTTCTAAGTATGGTAACATTGTCACCATTCACATCGGATCTAAACCTTCCATTTTCATAACATGTCATGAAGCTGCTCATAGAGCACTAGTTAAAAATGGCACTATCTTTGCTGATCGTCCTTTGGCTCTTGAAACCACCCAAGTTTTCTTCCCTAACCAATACACCGTTACTACTTCTCCATATGGCCCCAATTGGAGATTTTTTCGCCAAAACTTAGTGCAAACAATTCAATCTTCTCGGTTAAGTTTATATTCTAATTGTCGTAAGTGGGCATTAAATATATTAAAGAAAAATATTCTAGATGAGATTGAGTCCGGCAACAGGGCCATACCAATTGATGGTTACTTCAATTATGCATTGTATGCTTTATTTTCGTATATTTGTTTTGGAGAGAAGTTTGATGAGACAACCGTTAGCAGTATTCAAAGGGTGCAACATAGTTTTCTTCACAATTTCATTAAATTCAATGTGTTAAATTTTGTACCGGTCTTGTCTAAGATTGTGTTTAAAGGGTTGTGGAGAGAGATCTTGGTAATTCGTCAAAATCAGGTGAATGTATTCCTCCCTATCATAAAAGCACGCTACGAGAAAATAAAAAGCAAGGTTGGTGTTGAAGATGAAAATGATGGAGTGTTTAAGCCTTATGTGGATACCATTTTTGATATGAAACTCCCTAGCAATGGAAAGAAGCTAACGGATGAAGAGTTGGTTAGTATGTGTGTTGAGTTTATGATAGGTGGCACAGACACAACAGTTACCACGTGGATGTGGACCATGGCAAATTTAGTGAAGTACCAACACGTTCAAGAGAAATTGTTTGATGAAATTAAGGAAGTTGTGAAACCTGATGAGGACATTGAGGAGGAACATTTGAAAAGGATGCCTTATTCGAAGGCTGTAGTGTTGGAGACCTTAAGGAGACACCCTCCAGGGCATTTTATATTGCCTAGGGCAGTCACACAAGATACTGTTATGGATGGCCATGATATACCCAAAAATGCAATTGTGAATTTTCTTGTGGCTGAATTTGGTTGGGATCCAAATGTGTGGGAAGATCCTATGGAATTTAAACCTGAGAGGTTTTTGAGGCATGATGGAGATGTTAAATTTGATCTGAAAGGGACTACAGAGATTAAAATGATGCCTTTTGGTGCTGGAAGGAGAGTTTGTCCAGCAATTAGTATGGCAACTTTTCACCTTCAGTACTTTGTAGCCAATTTGATAAGGGATTTTAAATGGACTCTTGAAGAAGGGTGTGAAGTTGACATGAGTGAGAAGCAGGCCTTCACTATTGTGATGAAGAATCCATTAAGGCCATGTGTGTCTCCAAGAAGCACTTGA 1689 0.3991 MTTKVITPDGADDFEANGSGLELRALWLLILLRVSPLRFDLLLSSCHLFFSLGPSVSKLEIPRRTQKYEEEWGEVAIYNKRLPPSPPTLPFIGNIFWLLKSSKNFADLEPVLRSLRSKYGNIVTIHIGSKPSIFITCHEAAHRALVKNGTIFADRPLALETTQVFFPNQYTVTTSPYGPNWRFFRQNLVQTIQSSRLSLYSNCRKWALNILKKNILDEIESGNRAIPIDGYFNYALYALFSYICFGEKFDETTVSSIQRVQHSFLHNFIKFNVLNFVPVLSKIVFKGLWREILVIRQNQVNVFLPIIKARYEKIKSKVGVEDENDGVFKPYVDTIFDMKLPSNGKKLTDEELVSMCVEFMIGGTDTTVTTWMWTMANLVKYQHVQEKLFDEIKEVVKPDEDIEEEHLKRMPYSKAVVLETLRRHPPGHFILPRAVTQDTVMDGHDIPKNAIVNFLVAEFGWDPNVWEDPMEFKPERFLRHDGDVKFDLKGTTEIKMMPFGAGRRVCPAISMATFHLQYFVANLIRDFKWTLEEGCEVDMSEKQAFTIVMKNPLRPCVSPRST 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00050 562 CDD CYP77_89 118 554 - -
Pste1g00050 562 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 77 553 - -
Pste1g00050 562 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 499 508 IPR017972 GO:0005506|GO:0016705
Pste1g00050 562 SUPERFAMILY Cytochrome P450 83 560 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00050 562 PRINTS E-class P450 group I signature 140 161 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00050 562 PRINTS E-class P450 group I signature 455 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00050 562 PRINTS E-class P450 group I signature 414 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00050 562 PRINTS E-class P450 group I signature 351 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00050 562 PRINTS E-class P450 group I signature 371 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00050 562 PRINTS E-class P450 group I signature 116 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00050 562 PRINTS E-class P450 group I signature 235 253 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00050 562 PRINTS E-class P450 group I signature 506 529 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00050 562 PRINTS E-class P450 group I signature 496 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00050 562 PRINTS P450 superfamily signature 362 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00050 562 PRINTS P450 superfamily signature 415 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00050 562 PRINTS P450 superfamily signature 497 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00050 562 Pfam Cytochrome P450 83 551 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00050 562 Gene3D Cytochrome P450 77 562 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste1g00050 562 FunFam Cytochrome P450 family protein 77 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00050 Pste-Chr1 253617 263130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00050 82 562 Cytochrome P450 AT1G64940 43.992 9.64e-153 446