Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00040 CGTGTTATTTTGTGCTGTGTGAGCTGTGACGAGTTAGGGAAGGCGTCGGTCGCACGTACGCTCAACCTGCATTTCTCTCTCACTCTCGCATCTCAGATCGAAATCGAGGCGCTTTCTACTGTTGCTATGGCCTTTTGTCTTTTGAAATGGCAATGGCCGTGGCTTCTTTATGTTCTGCTGATACATGTTGTAATTAATAACAGCAAAGCAATCACTCCTGACGGTGAGGTGCTTACCAACTTTAGGTCCGCAGTTGTTAATTCTGATGGTATCTTATTACAGTGGAGGCCAGAGGATCCTGACCCATGTAAATGGAAAGGAGTGAAGTGTGATCCGAAAACTAAAAGAGTAACACATCTGAGTCTATCTCACCATAAGTTAAGTGGGTCTATATCACCTGACCTTGGGAAGCTAGAGAAACTGAGAGTTCTTGCTCTTCATAACAACAACTTCTATGGGACAATTCCATCAGAATTGGGAAATTGCACTGAATTGGAGGGAATATTTTTACAGGGTAATTACCTTAGTGGAATGATTCCAAGTGAAATAGGAAACCTTTCACAGCTTCAAAATTTGGATATATCAAGCAATTCTCTCAGTGGGAATATTCCTGCTTCACTTGGCAAGTTGTATAATCTCAAAAATTTCAATGTATCAACCAATTTTTTGGTCGGACCTATACCTTCTGATGGTGTCCTTGCCAACTTCACTGGAAACTCCTTTGTAGGAAATCGTGGTTTGTGTGGAGTGAAAATCAATTCAACATGTAAAGATGATGGTTCCCCGGGGAGCAATAATCAATCTACTTCCTCAGACCAAAATCAACTTGGAAAGAAGAAATATTCTGGCAAGCTGCTCATCAGTGCATCAGCAACTGTGGGAGCCCTACTTTTGGTGGCACTTATGTGCTTCTGGGGTTGTTTTCTTTACAAGAAGTTTGGTAAAAATGACAGAATAAGTCTGGCAATGGATGTTGGCGCAGGTGCATCAATTGTTATGTTTCATGGAGATCTACCATATTCTTCGAAAGACATCATTAAGAAACTAGAGATTTTGAATGAGGAACACATAATAGGGATAGGGGGATTTGGAACTGTTTACAAGCTTGCAATGGATGATGGGAATGTATTTGCTTTGAAAAGGATTCTAAAGTTGAATGAGGGTTTTGATCGTTTCTTTGAGAGGGAGCTTGAAATTCTTGGTAGCATCAAACACCGTTATCTAGTGAACTTACGAGGTTATTGCAATTCACCTACGTCAAAGTTGTTAATATATGATTACTTACCAGGTGGTAGTCTTGATGAAGCTCTTCATGAAAGAGCTGAGCAACTAGACTGGGATTCACGCTTGAATATAATCATGGGAGCAGCAAAAGGGCTTGCCTACTTGCACCATGATTGTTCCCCTAGGATCATACACCGTGACATAAAATCTAGCAACATTTTGCTTGACGGAAACTTGGATGCTCGGGTCTCTGATTTTGGACTTGCTAAATTGCTGGAGGATGAAGAGTCTCACATAACCACTATTGTTGCTGGAACATTTGGTTATCTAGCTCCGGAGTATATGCAAAGTGGCAGAGCAACTGAGAAGTCTGATGTGTATAGCTTTGGTGTGTTGACACTTGAGGTGCTCAGTGGAAAGCGGCCAACAGATGCAGCATTCATTGAAAAGGGTCTCAATATTGTTGGTTGGTTGAATTTTCTAATTACTGAAAATAGGCCGAGGGACATTGTTGATCCACTATGTGAAGGGGTGCAAATGGAGAGCCTTGATGCCTTGCTTTCTGTGGCTATTCAGTGTGTTTCCTCAAGTCCTGAGGATCGACCCACCATGCACCGAGTGGTGCAATTGCTTGAATCAGAGGTCGTAACTCCATGCCCTAGTGACTTCTATGACTCCAACTCCGATTAGAAAGCTTGCAAAGACACACTAAAAGTATGTTCTTGTGTTTGCATCCATGTCACTGCACATTTCTTGCAAGTCAGAAGCGATGAAAGAGGCTCAGAATCTGCAGTGTTACGTTTCATCTCAATTGATTCATTCTTAACTGGAGTTATAATGAAGCAGATCCTTCAATACACCACTGCATGATACAAGTTGTGGTTTCCCGTCACATGTCATCATTGGACATGTTCATACATTCCTTCGTCTTTGTGAATGGAGTTGCATGTGTTACTCAATGGATCGCGGTTCCTATCTTCCTCTTGTGGTTTTTTTTTTTTTTCCTATTTTTTCCCTCTCTGCTAGCATTGTAATCTTTGTTACATTTGTTCACTCCGATTTAAGTGTATATGAATGTGTACAAGTTCAGATGGCCCACTCTCGCAAGTGATTCTTGTTATTTGTTTTTGTAATATATGTCCTATAAAAGAATTCATCTAACGAGTGTGGTTCTCACTTCTCAGATTTCAGATTGAGTTTTATTTTTTCG 2434 0.4092 RVILCCVSCDELGKASVARTLNLHFSLTLASQIEIEALSTVAMAFCLLKWQWPWLLYVLLIHVVINNSKAITPDGEVLTNFRSAVVNSDGILLQWRPEDPDPCKWKGVKCDPKTKRVTHLSLSHHKLSGSISPDLGKLEKLRVLALHNNNFYGTIPSELGNCTELEGIFLQGNYLSGMIPSEIGNLSQLQNLDISSNSLSGNIPASLGKLYNLKNFNVSTNFLVGPIPSDGVLANFTGNSFVGNRGLCGVKINSTCKDDGSPGSNNQSTSSDQNQLGKKKYSGKLLISASATVGALLLVALMCFWGCFLYKKFGKNDRISLAMDVGAGASIVMFHGDLPYSSKDIIKKLEILNEEHIIGIGGFGTVYKLAMDDGNVFALKRILKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEALHERAEQLDWDSRLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKSDVYSFGVLTLEVLSGKRPTDAAFIEKGLNIVGWLNFLITENRPRDIVDPLCEGVQMESLDALLSVAIQCVSSSPEDRPTMHRVVQLLESEVVTPCPSDFYDSNSD 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00040 637 ProSiteProfiles Protein kinase domain profile. 352 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00040 637 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 428 630 - -
Pste1g00040 637 Gene3D Transferase(Phosphotransferase) domain 1 428 625 - -
Pste1g00040 637 ProSitePatterns Protein kinases ATP-binding region signature. 358 384 IPR017441 GO:0005524
Pste1g00040 637 Gene3D Phosphorylase Kinase; domain 1 325 427 - -
Pste1g00040 637 SMART serkin_6 352 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00040 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Pste1g00040 637 Pfam Leucine rich repeat N-terminal domain 73 111 IPR013210 -
Pste1g00040 637 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 115 620 - -
Pste1g00040 637 Gene3D Ribonuclease Inhibitor 72 257 IPR032675 -
Pste1g00040 637 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 326 427 - -
Pste1g00040 637 SUPERFAMILY L domain-like 72 237 - -
Pste1g00040 637 SUPERFAMILY Protein kinase-like (PK-like) 340 619 IPR011009 -
Pste1g00040 637 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 71 233 - -
Pste1g00040 637 Pfam Protein kinase domain 354 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00040 Pste-Chr1 213050 230280 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00040 43 628 Receptor kinase-like Gene Family AT2G35620 74.573 0.0 879
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Pste1g00040 Pkinase 1.9e-45 CL0016