Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00033 CACAACCCTATCTTCTTCGAGTGTTCTTCCTCTTTGATTAATTTCTTTGTAGCCTTTTATTCTCAACCTCTCCTCAAAAGAAGAAGAAAAATGGCCACTGAAAAGCTTACAAGTTGTGCAAAATTTTTTGCAAGCTCTAAACCCTACTTGGCCATGATCTCTTTGCAATTTGGCTATGCTGGCATGAACATTATCACTAAGGTTTCTCTCAACCAAGGCATGAGCCACTATGTTCTTGTGGTTTATCGCCATGCTTTTGCCACTGCTTCCATTGCTCCTTTTGCATTCATTTTTGAAAGGAAAGGTCAACCAAAGATAACATTCCCAATTTTCATGCAAATTTTTGTCCTAGCTCTTCTCGGGCCTGTGATCGATCAAAATTTCTACTATGCTGGGTTGAAGCTCACATCTCCAACCTTCTCTTGTGCAATGAGCAACATGCTTCCAGCAATGACTTTTGTTATGGCAATTTGTTGCCGGATGGAGAAGATAAACATAAAGAAGGTGAGATGCATAGCAAAGATAGTGGGGACATTATTGACAGTGGCAGGGGCCATGTTAATGACCTTATACAGAGGCCCTATAGTGGAGATGTTATGGGCCAAACATGCACACAATAAAGCCAATGCAACAAGCACCACAGGATCATTGGACAAAGATTGGTTCCTAGGTTGCACCTTTCTTATCATTGCAACCCTAGCTTGGGCTTCCCTCTTTGTTTTACAAGCAAAAGCTATACAAACGTACAAAAATCATCACCTAAGCCTCACTTCACTTGTGTGCTTTATAGGCACTCTTCAGGCTATTGCTGTTACTTTTGTTGCTGAGCACAATGCTTCTGTGTGGAGAATTGGTTGGGATATGAACTTACTTGCTGCTGCATATGCTGGGATTGTGACATCAAGCACATCATACTATGTACAAGGACTGGTAATTAAGAAGAAAGGACCTGTCTTTGCAACTGCCTTTAGCCCTTTAATGATGATCATTGTTGCCATCATGGGTTCCTTTATCCTTGCAGAGCAAATCTATCTTGGAGGTGTGATTGGTGCCATCTTAATTGTCATAGGTTTGTATTCAGTTCTGTGGGGAAAGCACAAAGAGCAAATGGAGAACAAAGTGGCAGATGAAATTTCATTGCCTGTAAAGGATGCTCAAATTGCTGTCATTGGAGGACCAGTGATTGATGCCACAGATAATTTTACAGAAGAAAAATATTGTCAAAAGGGAGAACCCAACAACAAACTCTCTTCAGTTATAATAACTTTGCCTATTCAAGAGCCTCCCACAAAAACTAACCAACAGGCAAAGGCTTAAGCAATTTGGAAATGTGAATAGGAAACCTTTTTTTTTCTTATGTTCCATTATCCTCATTTTGCCCTTTCTAGCAATTTTTATTTTCCCCTTTAGTTTTTTCTTCTTTAGCTTTTTTTCTGCTATAAAAGGGTTCTTGCTTGTTGCATTTAAGCAATATATATATATAAACTTGTAAGATAATCAATCAAATTAGAAAAGAGAATGATAAAGCTTGTCTCTCTCTGGGGCATCTCTATTTATTTTATTGGTATAATCATTTTAGATTTCATGTACTTGGTTTTTTATTTTTTTTTTTTATTTATGATATTAGTGCAGAATATCTATCACTTTTTCTAATAGCTACTACTTGCATAGTAATTGTGATTTCACTTAGGCTAATAATTGTTAAGACAACATTCACTTACGCTAATAATTTGTTGATACTCATTTTT 1748 0.373 MATEKLTSCAKFFASSKPYLAMISLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATASIAPFAFIFERKGQPKITFPIFMQIFVLALLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAICCRMEKINIKKVRCIAKIVGTLLTVAGAMLMTLYRGPIVEMLWAKHAHNKANATSTTGSLDKDWFLGCTFLIIATLAWASLFVLQAKAIQTYKNHHLSLTSLVCFIGTLQAIAVTFVAEHNASVWRIGWDMNLLAAAYAGIVTSSTSYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEQIYLGGVIGAILIVIGLYSVLWGKHKEQMENKVADEISLPVKDAQIAVIGGPVIDATDNFTEEKYCQKGEPNNKLSSVIITLPIQEPPTKTNQQAKA 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00033 408 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020
Pste1g00033 408 Pfam EamA-like transporter family 193 332 IPR000620 GO:0016020
Pste1g00033 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 337 - -
Pste1g00033 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 161 - -
Pste1g00033 408 PANTHER WAT1-RELATED PROTEIN 17 341 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00033 Pste-Chr1 198123 202441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00033 1 405 Nodulin-like Gene Family AT5G07050 62.981 0.0 526