Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00027 CACAAACCTGCCCTTACTAGTAATAAAATCAAATTTCACATACTAGTAGAGAATATTTTTGTTTTTCTTTTATATATATATATAGATAGATTAAAAATTAAATTTAATGAGTTATTTAATATTTAATATATTTGTTTTGATTTAAAACTTTAATAAATAATGATAAAGAATGCGTTAAAGATTGTATTTAGATGAGTTGTGGAGGTAGCTTTTATAAGCAATGAGTGGAGGAAGAGAGAGAGAGAGAGAGAGAGAAAAAAAAAAGAAGATTTTGCTGGAGAAGAGATTGTGTGGTTTGGTGTGTTTAAAAGGAAGAAGAAGGCAACGTAGAGAAAGAGAGAGAAGTGATAATGGCGGGGCAATCAAGGAAGTGGATGATTTTGGTGGCGACAATATGGATACAGGCATTCACGGGGAGCAACTTCGATTTCTCAGAGTACTCGTCTTCATTGAAATCCGCCCTAAACATCTCACAGGTGCAACTCAACTACCTCGCCACCGCCAACGACATGGGCAAGGTATTCGGCTGGTCCTCAGGCCTCGCCCTCATGCACCTCCCACTCTCTCTCGTCATGCTCATCGCCGCCTCCTTTGGCCTCGTCGGCTACGGCCTCCAGTGGCTCGCCATCAAAACCATCATCTCCTTGCCTTATTCCCTCTTCTTTCTTCTGTGTCTGTTGAGTGGCTGTAGCATCTGTTGGTTCAACACAGTGTGTTTTGTTCTTTGCATTAGGAATTTCCCAGTTAACAGACCCCTTGCATTGTCACTCACAGTGAGTTTCAATGGTGTGAGTGCTGCACTCTACACACTGGCTGCCAATTCTATAGACCCTTCATCAGAGGAACTATATCTACTCTTGAATGCCCTTGTTCCCCTTCTTACTTCCCTCGTAGCACTGGTCCCAATTCTTCTCCAACCCCCTTTGGACTCTTTCTCAAGATCTCCAGATGCTGCTCGCAAGAACTCAGTAATATTTCTAGTACTCAACTTCTTAGCCATTTTCACTGGCCTATACCTCCTCCTCTTTGGCTCATCAACTTCTGACAAAGCCACATCGAGGCTCTATTTTGGTGGGGCCATTTTGCTCCTCATATCCCCACTATGCATTCCGGGCATCATATATGCTCGAGATTGGGTTCACCATGCCATCCATTCTAGATTTCGGGTGGAAGGCTCTGGTTTCCTTCTTGTTCATGTTGATGATCTTGAACTTCATAAGGACCTCCTTACTCGTCAGACCAGTGCTCTTACTCTCAGCAATGAAGATGGTCACAGCCTGCTGACTGAGAATGGATCCGCGTATGGAAGTCAGAGCTCAAAATCTAGTGACGTGTGTTGTGACAAGATTCTTGGCCAGGACCAGTTGGCAATGCTAGGAGAAGAGCATAGTGCTGCAGTGGTTGTCCAAAGGATGGATTTCTGGCTCTACTATGTTGCATACTTCTGTGGAGGCACAATTGGTCTTGTCTACAGCAATAATCTGGGACAGATAGCTCAATCTTTAGGCCTGAGGTCAAGTATATCTACCCTTGTCACACTATACTCAGCATTTTCCTTCTTTGGCCGCTTGCTCTCAGCTGTACCAGACTATATTCGAAACAAGTTCTACTTTGCAAGGACCGGATGGCTTGCCATTGCTCTTGTTCCAACCCCAGTTGCGTTTATATTGCTTGCATCATCAGACAGTGCCACTGCGCTTAACACAGGCACTGCACTAATTGGCTTGAGCTCAGGTTTCATATTTGCGGCCGCTGTGGCAATTACATCAGAGCTATTTGGACCCAACAGTGTGAGCGTCAATCACAACATTCTCATAACGAACATCCCAATTGGGTCACTTCTGTATGGTTTTCTGGCTGCATTGATTTATGATGAGAATGCTTACTCTATCCCAGGAGACCTAATGGGTGACACACTGGTGTGCATGGGGAGAAAGTGCTACTTTTGGACATTTGTCTGGTGGGGCGGAGTGTCTGTCATAGGACTAGCTTCTAGTGTGTTGTTGTTCTTGAGAACAAAACGTGCATATGATCGTTTTGAAAGACACCGTATTTCTGCGCAATCTATGGTGTCTTAGCTTTTGGCAATGTTGAAACGTGCAGATCATGGAATTACTGATAGTTGAAGTTGAAGTTGGATGTATAGGGGATATGATTTTGGAGTTTAGAGATGAAGCAGGGGAGAGTAAGCATTTTATTTCTCTCTGACAATGCGCCAAACAAACAAACAGTTAAAAGAAAAACAAGTAAATACTAACTACTAAGAATGGAACCTGGATGCTGGAAGAACCTGAGGAAAAGATTATTACTTAGTCCCGACCGTCACGTATACACGTGGACCTTCATGCTGGAAAACATATGCGACAATGAACATATACTCGTGGACCTTCATGAGGTTTTGCCACACCGAGTTGGGTCAATATGAGCAGGTAAACACTCAGCTTCATACGAAATACATAGTTTTATGTTTTCTAATTATAGCCACTGAAGAATAGTGACAATATGTATATACATACACACATACATATGATGTATGCTTCGACCTTGGTTGAGGTATCGTGGAATAGAAGAGAACATAGCATATTTATGGTCTACGTGTAAAATTTTTTTAAGAGATACGTTTACATCTTGCCGGTGGACACCAACCTTTTCTTTTTCAAAAAGAAAAAAAAATAGTATTTGACAATTCAGGGATTATTGGTTGTCAGTTTTTTTCCTTTTATATTTTTAAATTATAAGTTTTAAATTAAAATATCTTTGATTAAAAATGAAGTTGAATTGATTTTTAATTCAATGACGCAGATCCAAAAATGTGACAAATCGTGTCTCACGGCATCACTTAATTGTGGA 2850 0.414 MAGQSRKWMILVATIWIQAFTGSNFDFSEYSSSLKSALNISQVQLNYLATANDMGKVFGWSSGLALMHLPLSLVMLIAASFGLVGYGLQWLAIKTIISLPYSLFFLLCLLSGCSICWFNTVCFVLCIRNFPVNRPLALSLTVSFNGVSAALYTLAANSIDPSSEELYLLLNALVPLLTSLVALVPILLQPPLDSFSRSPDAARKNSVIFLVLNFLAIFTGLYLLLFGSSTSDKATSRLYFGGAILLLISPLCIPGIIYARDWVHHAIHSRFRVEGSGFLLVHVDDLELHKDLLTRQTSALTLSNEDGHSLLTENGSAYGSQSSKSSDVCCDKILGQDQLAMLGEEHSAAVVVQRMDFWLYYVAYFCGGTIGLVYSNNLGQIAQSLGLRSSISTLVTLYSAFSFFGRLLSAVPDYIRNKFYFARTGWLAIALVPTPVAFILLASSDSATALNTGTALIGLSSGFIFAAAVAITSELFGPNSVSVNHNILITNIPIGSLLYGFLAALIYDENAYSIPGDLMGDTLVCMGRKCYFWTFVWWGGVSVIGLASSVLLFLRTKRAYDRFERHRISAQSMVS 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00027 575 Gene3D MFS general substrate transporter like domains 357 571 IPR036259 -
Pste1g00027 575 Pfam Nodulin-like 7 254 IPR010658 -
Pste1g00027 575 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 561 - -
Pste1g00027 575 SUPERFAMILY MFS general substrate transporter 11 558 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00027 Pste-Chr1 168446 173662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00027 1 572 Nodulin-like Gene Family AT1G31470 57.068 0.0 602
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00027 1 168446 173662 Pste1g00027 1 168446 173662 ECH
Pste1g00027 1 168446 173662 Pste7g00533 7 4935411 4940398 PCT