Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste10g00112 CATGGCTTCTTTGATCACTCTGAAACTGTTCTCAATTCTCCTGCTCTGCAAACTTAGTTTCTCAACCACTGAAACGACCTCAACTTTCATGCATCACGACTGCACAAGCAAGCCTAAGTTTAGTCCCAAAAGCGCTTACCAATTGAACCTAAACAATATGTTATCTGAACTTACATCTCAAGCTTTTGACAGCACCAACCAATATGGCTTCTACCAAGCCACAGGGAGTGGAACAAACGAACGTGACACAGTCTATGGACTCTTCATGTGTAATGGATACATAGAAAAATGTGGAGAATGTGTGAATACTTCTATCCACACTCTTAAATCAAAGTGTGTGCTCAACAAAGAGGCTGTAATTTGGACTCATGAATGCATGGTTCGTTACTCAAACCGGTTTTTCTTCACCACTTTGGAGGAATGGCCATCATGGTGCATGCAGAACAATGAGGACTATCAGGGCCATTTGGAAAGTTTCAACAATGTGCTGAGTTCCTTGATGGATGATCTTCTAACTGAAGCCAGTGAAGCTCCAATGAGTTATAATAAATTTGCTGTGAAGAATGCAACTGTCTCTGAAGGCAAAGACTTGACTGGCTTTGCTCAGTGCATTCCAAACCTCTCCAAGGACAATTGCAAGAAGTGCCTCAGGGATGCCATGGATTTTCTTCAAACATGTGCTAAAGGCAAAATAGGAGGAAGAGTTCTACATCCAAGTTGTATAGGTATGTTTTCAAATGGATTTGAAATAGCAGTAAAGAGGCTAAAAAAAGATTCCAGTCAAGGAGCTACAGAATTCAAGAAAGAGGTTTTGCTAATTTCAAAACTTCAACACAGAAATCTCGTGAGTCTATTGGGATTTTGCATGGAAAAGAATGAAAAAATACTCGTCTATGAATTCGTGCACAACAAAAGCCTTGATTACTACTTATTCAGCCCAGGAAATCATAGGAAATTAAGTTGGCCAGAACGATATAGAATTATAAGAGGAATTGCTAGAGGAATTCTTTATCTTCATGAGGATTCTCACCTCAACCTGATACACTGTGATCTTAAACCCAGCAATATTTTGTTAGACAGCAAAATGTCTGCAAGGATATCAGATTTTGGGTTGGCAAGAATTATTTCCATTGATCAAATGCAAGGGAATACCAGTATAATTTCAGGGACATACGGCTACATGTCTCCTGAATATGCAATGCTTGGTCAATTTTCTGTAAAATCTGATGTCTTCAGCTTTGGAGTCATAATTCTTGAGATTATCAGTGGAAAAAGAAATGAAAGTAAACCACTTGAGTTGTTGGATCCCACATTAGAACACCCCTTTTCTGAAAAAGAAATCAGAAGGTGCATCCAAATTGCTCTATTATGTGTGCAAGGAAACCCAGATCAGAGGCCTATGATGGCAACAATTGCTTTGTATTTTAACTGTGATCCAGTAGTTGATCTACTGCCTTTACCACAAGAGCCAGCGTTTTTTATGTGTGGAAAATCAGAAATCAAGGATGGC 1510 0.3914 MASLITLKLFSILLLCKLSFSTTETTSTFMHHDCTSKPKFSPKSAYQLNLNNMLSELTSQAFDSTNQYGFYQATGSGTNERDTVYGLFMCNGYIEKCGECVNTSIHTLKSKCVLNKEAVIWTHECMVRYSNRFFFTTLEEWPSWCMQNNEDYQGHLESFNNVLSSLMDDLLTEASEAPMSYNKFAVKNATVSEGKDLTGFAQCIPNLSKDNCKKCLRDAMDFLQTCAKGKIGGRVLHPSCIGMFSNGFEIAVKRLKKDSSQGATEFKKEVLLISKLQHRNLVSLLGFCMEKNEKILVYEFVHNKSLDYYLFSPGNHRKLSWPERYRIIRGIARGILYLHEDSHLNLIHCDLKPSNILLDSKMSARISDFGLARIISIDQMQGNTSIISGTYGYMSPEYAMLGQFSVKSDVFSFGVIILEIISGKRNESKPLELLDPTLEHPFSEKEIRRCIQIALLCVQGNPDQRPMMATIALYFNCDPVVDLLPLPQEPAFFMCGKSEIKDG 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste10g00112 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 346 358 IPR008271 GO:0004672|GO:0006468
Pste10g00112 503 Pfam Salt stress response/antifungal 145 246 IPR002902 -
Pste10g00112 503 Pfam Salt stress response/antifungal 34 131 IPR002902 -
Pste10g00112 503 Pfam Protein tyrosine and serine/threonine kinase 242 472 IPR001245 GO:0004672|GO:0006468
Pste10g00112 503 ProSiteProfiles Gnk2-homologous domain profile. 28 134 IPR002902 -
Pste10g00112 503 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 224 494 - -
Pste10g00112 503 ProSiteProfiles Gnk2-homologous domain profile. 140 249 IPR002902 -
Pste10g00112 503 SMART serkin_6 220 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste10g00112 503 SUPERFAMILY Protein kinase-like (PK-like) 245 488 IPR011009 -
Pste10g00112 503 Gene3D Transferase(Phosphotransferase) domain 1 303 477 - -
Pste10g00112 503 FunFam Lectin-domain containing receptor kinase A4.3 301 430 - -
Pste10g00112 503 Gene3D - 25 134 IPR038408 -
Pste10g00112 503 Gene3D - 143 244 IPR038408 -
Pste10g00112 503 Gene3D Phosphorylase Kinase; domain 1 245 302 - -
Pste10g00112 503 ProSiteProfiles Protein kinase domain profile. 220 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste10g00112 242 493 Receptor kinase-like Gene Family AT4G23190 55.435 8.64e-105 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste10g00112 PK_Tyr_Ser-Thr 4.2e-41 CL0016