Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste10g00096 AAAAAAAAAGGAGAGCGGTGACAGATGGATATAGAACAACAATAACATGTCACACATTACATTTATATCACACCGTATTTAAGATTTGCCCACCCACGTTAAGGAATCCTCTTCTCTTTCTCTTTCGCTTTCAATTCCCTCCCTCTGCGCTTTTTCCATGGACACGGACGCCGTCGTTTCCTTCGACCATGTCTTGCCGGAGGATTCCCACGAGGTTCATGTCTTGGCCGTCGACGACAGCCTCGTTGATCGAAAGTTCATCGAACGCTTGCTCAAAATCTCAGCTTGTAAGGTTACCGCTGTGGATAGTGGAATCAGAGCACTGCAATTTCTGGGGTTGGATGAGCAGAGAAGGATCTCTGAATCTGATGGTTTTGTCCCAAGTTTGAAGGTGGATCTAATTATCACAGACTACTGCATGCCCGAAATGACCGGTTACGAGTTACTCAAGAAAATTAAGGAATCGTCCACTTTCAGAGAAATTCCTGTAGTGATTATGTCGTCTGAAAACATTTTGCCGCGCATAGACAGATGTTTGGAGGAGGGTGCAGAGGATTTCATAGTGAAGCCAGTGAAGTTATCTGACGTGAAACGGTTAAAGGGTTACATGACAACGCGAGAGGTTAAGGTGGGAAGACGAGACACAATAATTAGTGGAGATGGTGGTGGCGGCGATGATGGTGTGGAGATAAACAACAAAAGGAAGCTGGAAGAGCAAGAGGACGCATCTGACGTGTCATCATCCCCACCTTCCACTTCTACGCTCTCATCATCACCGTCCGTTTCTTCACCATCATCTTCTCCCACGTCTTCACCCAGCGTGCTCGCTTCTCCAATCAGACGGCTTAAAATGACCAGCACCGATTGACTCTCTGTTATGTCCTCCACAGCAGCATTTCTCTTTTTGCTCTTCAGATTTATTGCTCCCCTCTTTTGGGGCTCCAACTGCAATTACCCGTTCCTGTGTGTAACGGTTTTTGTTGCACTGCCCCGCTCTTTTCTTTTGCTAATTTATTTTGTTTGTTTGTTAAAGTTAATGAAGCATATTATTATGTGCCAAGAAAGGGTTAATGAAATATATATTAATATAATGTTTTTGTTTTACGGAAAAAGGGATGAATTGAAAAGATTATGCCCTTTTTATACGAACTTGTAATGAAAACCTCGAAATAAAAAAAAAATATATATATATATATGGTGTGGAAGGGGATGAGTGAACATTGAATTTGGGATGGGAAATGATGTAAAACAGATGGAATATTAGTTTGAAAGATCTTGTCTGGTGTAAAGAATAAAAAAAAAAAAGGAACGGGGATGTGAATTGGACATGCTGGAAGTGTTCCCTTAACGAAGAGGGTGAGAAGGTGTCGTGGGGTCTTGGAACTGCTGTACTTGTCTGATTGTCTCTAATGGAGGAGGTTTCGCTGCAATAAACCCTTCTGCAATATCAGAAAACATTGCCTATGTCATGTGGAAGAGGAACCAGAATATTTGGTTGTTGATACTGGACCATAGTGATCCACATGTGCCCTGTGCTGGATTGGCTTTTTTCATCTTTTTTTCATGTTCGCCCCTTTTCAACGGAAGGTAACATTGACCACCACAGGCTTCATATGTTACGCTTACACTTAAAGAGGTAACAATACTTATCCAAACTACACAAAGGTGAATATCTCACCTTGGTTACATTTACATACCATCACTTGCTGTTATTTTAATTATTATTAGTTCAAGAACTATGTTTCACGAATACTATAATTTATTATGGGATTCCAC 1776 0.4133 MDTDAVVSFDHVLPEDSHEVHVLAVDDSLVDRKFIERLLKISACKVTAVDSGIRALQFLGLDEQRRISESDGFVPSLKVDLIITDYCMPEMTGYELLKKIKESSTFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYMTTREVKVGRRDTIISGDGGGGDDGVEINNKRKLEEQEDASDVSSSPPSTSTLSSSPSVSSPSSSPTSSPSVLASPIRRLKMTSTD 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste10g00096 236 ProSiteProfiles Response regulatory domain profile. 21 152 IPR001789 GO:0000160
Pste10g00096 236 Gene3D - 20 196 - -
Pste10g00096 236 MobiDBLite consensus disorder prediction 191 236 - -
Pste10g00096 236 MobiDBLite consensus disorder prediction 162 236 - -
Pste10g00096 236 SMART REC_2 20 151 IPR001789 GO:0000160
Pste10g00096 236 CDD REC_typeA_ARR 22 147 - -
Pste10g00096 236 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 201 IPR045279 GO:0009736
Pste10g00096 236 SUPERFAMILY CheY-like 20 146 IPR011006 -
Pste10g00096 236 Pfam Response regulator receiver domain 22 144 IPR001789 GO:0000160
Pste10g00096 236 MobiDBLite consensus disorder prediction 175 190 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste10g00096 14 228 Response Regulator Gene Family AT1G59940 56.000 2.89e-72 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste10g00096 Response_reg 2.3e-20 CL0304