Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste10g00088 ATGGCAAAACCTATACCTAAAAAGGGTTCGCGGAAAAATGGACGTATTGGCTCACGTAAGCATACTCGTAAAATACCAAAGGGAATTATTCATGTTCAAGCTAGTTTCAACAATACTATTGTGACTGTTACCGATGTACGAGGTCGGGTGATTTCTTGGTCCTCCGCCGGTACTTGTGGATTCAAGGGGACACGAAGAGGGACACCTTTTGCCGCTCAAACCGCAGCAGGAAATGCTATTCGAACAGTCGCGGATCAAGGTATGCAACGAGCAGAAGTCATGATAAAAGGTCCCGGTCTCGGAAGAGATGCGGCATTAAGAGCTATTCGTCGAAGCGGTATACTATTAAATTTTATACGAGATGTAACCCTATGCCACATAATGGATGTAGGTCTCCTAAAAAGACGCGTGTAA 414 0.4469 MAKPIPKKGSRKNGRIGSRKHTRKIPKGIIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGTRRGTPFAAQTAAGNAIRTVADQGMQRAEVMIKGPGLGRDAALRAIRRSGILLNFIRDVTLCHIMDVGLLKRRV 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste10g00088 137 Pfam Ribosomal protein S11 28 123 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pste10g00088 137 Gene3D Ribosomal protein S11 8 136 IPR036967 GO:0003735|GO:0005840|GO:0006412
Pste10g00088 137 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 4 136 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pste10g00088 137 Hamap 30S ribosomal protein S11 [rpsK]. 3 137 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pste10g00088 137 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 22 126 IPR001971 GO:0003735|GO:0005840|GO:0006412
Pste10g00088 137 SUPERFAMILY Translational machinery components 23 124 - -
Pste10g00088 137 MobiDBLite consensus disorder prediction 1 24 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste10g00088 28 123 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 36.190 1.05e-11 57.0