Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste10g00047 ATGGCCTGCCCAAATGATGTTCAGCGGTCTCTACCCAACGGAACTCAGCTTAGAAGCTTTCTACCCGCACTACCTAGACCCACAGTTCACTCACCGGAGTCGATTTTGACCGTGGAGTCAACGGAGAAAACGGTTTCGTATAATGAAACTGTTCGTCCATATGAAATTCTTCCAATTTGGTTGGCGGAAGCGAATCCACAAATGCATGCAGAGTTCTCTGCAAATGCTGGAGGAACTACGATTCTGAAGAGGCGTAGTTCCCGGCCTCCCCTCTTTCGTTTGCTTCCGGTTCATGGAAGATGGGGTAAGGCTCGGGCAAGGACAAAGAAGGACAACGTGAAAAGAGGACAGTGGACACCTGAGGAAGATAACAAGCTCTCCTCCTACATTGCTCAACATGGCACTCGCAACTGGCGTCTCATCCCCAAGAATGCTGGCCTCCAGAGATGTGGAAAGAGCTGCAGGCTAAGGTGGACTAATTACCTTCGTCCTGATTTTAAACATGGTCAATTCTCGGATTCAGAAGAGCAAACCTGTTTGCGTAGGGAATTCTCTTTATCACATTGTTCCCTTAAATGCTTACTTAAACGGATGTTCAGATGGTCACTGATAGCAGCCCAGCTGCCAGGACGCACTGACAATGATGTCAAAAACCACTGGAACACCAAGCTGAAAAAGAAACTTCACCTAGCTGAAGCAGCCCTTGGCTGCTTCAAAGATGAGGTGCTCCACCTTCTTACCAAGAAGCCAATTAACTTCCAGGGCCAACATTCCACTGCAGCACTGGGAAATAACATCACCAATTACATTAACTGTAAGCCAGAAGAAAAGGACGACACTGTTGAGAAGATTTAG 855 0.4737 MACPNDVQRSLPNGTQLRSFLPALPRPTVHSPESILTVESTEKTVSYNETVRPYEILPIWLAEANPQMHAEFSANAGGTTILKRRSSRPPLFRLLPVHGRWGKARARTKKDNVKRGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYLRPDFKHGQFSDSEEQTCLRREFSLSHCSLKCLLKRMFRWSLIAAQLPGRTDNDVKNHWNTKLKKKLHLAEAALGCFKDEVLHLLTKKPINFQGQHSTAALGNNITNYINCKPEEKDDTVEKI 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste10g00047 284 Gene3D - 171 237 - -
Pste10g00047 284 ProSiteProfiles Myb-like domain profile. 163 224 IPR001005 -
Pste10g00047 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 200 228 IPR017930 -
Pste10g00047 284 PANTHER F14D16.11-RELATED 109 228 - -
Pste10g00047 284 CDD SANT 191 224 IPR001005 -
Pste10g00047 284 FunFam MYB-related transcription factor 114 167 - -
Pste10g00047 284 SMART sant 114 164 IPR001005 -
Pste10g00047 284 SMART sant 167 226 IPR001005 -
Pste10g00047 284 Pfam Myb-like DNA-binding domain 115 162 IPR001005 -
Pste10g00047 284 Pfam Myb-like DNA-binding domain 200 222 IPR001005 -
Pste10g00047 284 SUPERFAMILY Homeodomain-like 115 225 IPR009057 -
Pste10g00047 284 ProSiteProfiles Myb-like domain profile. 110 162 IPR001005 -
Pste10g00047 284 Gene3D - 114 167 - -
Pste10g00047 284 CDD SANT 118 162 IPR001005 -
Pste10g00047 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 110 166 IPR017930 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste10g00047 109 253 MYB Transcription Factor Family AT5G56110 63.429 9.34e-70 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste10g00047 Myb_DNA-binding 4.3e-06 CL0123