Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste10g00032 ATGGGCACAGTAGATATGATCATTGCATTTCACATGAAGGCTTTGGTCTTATTCCTTTGGCTGTTTGTCCCCTCATTGGGCAAAGACTTGTTAAGTTGTGAGACAACTTCACCTGATGCCTCTGGCTACCATTGCATTGAAAATGTGTCACATAACCAATGTGAAACATTTGCACTCTTTCTCACAAACTCTTACTATTCCTCTCTCTCCAACCTCACCTCTTATTTGGGACTAAATAGGTTTGTGATAGCACAAGCAAATGGATTCTCTGTAGACACTGAGTTCCTCTCCCAGGATCAGCCTATTTTGATACCAATTGAGTGCAAATGCAAAGGTGGCTTTTACCAGGCTGAGTTAACCAAAACTACCATTAAGGGAGAGAGTTTCTATGACATTGCTCAATCACTAGAGGGCTTGACAACTTGCAAGGCTATCTGGCACAACAACCCTGGTGTGTCACCTTGGAACCTTGATGACAAAATCAGATTGGTTATCCCATTGAGATGTGCATGCCCTTTTTCTTCTCAAGTTAAACCACAACCAAAGCTTCTGCTTTCTTATCCTGTAAGTGAAGGTGATACAATTTCTAATTTGGCCTCAAAGTTCAATATTACTAAAAAAGCTATTGTTGCTTCTAATAACATATCAGAAGGCCTTAGGAATAGAAATATTGCACCCTTTACCTCTATTCTTATTCCACTTAATGGTAAGCCTATCATTGGTCCTTTGATTAAGCCCAAGGAACCCAATTCTGGATTTCACACAACAAGCATCGCAGTGACAAGTAGTCCACACAAGAAGTCACTAATGTGGAAGACTGAATTGTGTATTGGCCTGGCTGGGGTTGCACTTGGAGTCTGCATTGCTTTTGCTGCAACCTTTATCTTCATCAGATTGAAGCACAAGAAGGAGGATGAGAATTCAAGCAAAGAAGGAGACATGGAGCTGCAACATCTGAACCAAAGTGTGAGAACCACCTCAACTAGTGACAAGAAAGTTTCATTTGAAGGGTCTCAAGATGCTCTTGATGTGAAAATTGTGGACTCCACACCACGGAAGATGTTGCTGGAGACATACACTATTGAAGATGCGAGAAAAGCAACTGAAGGTTTCAGCTCAAGCAATCACATTGAAGGGTCAGTGTATCATGGTCGTCTGAATGGGAAGAACATGGCAATTAAAAGAACAAAGGCTGAAGTAGTCTCAAAGATAGATCTTGGCCTTTTTCATGATGCACTTCACCACCACCCCAACATACTTAGGCTTCTTGGAACAAGCATATTAGAATGGAAGGAGCAAGAAGAGTCATTTTTAGTATTTGAGTATGCCAAAAACGGTTCATTGAAAGATTGGCTTCATGGTGGATTAGCCATCAAGAATCAATTCATTGCCTCTTGCTACTGTTTCTTGACATGGAGCCAAAGGTTGAGAATCTGCCTTGATGTGGCCAGTGCCTTGCAGTATATGCACCATGTAATGAACCCAAGCTATGTGCATAGAAATGTAAAAAGCAGGAACATCCTTTTGGATGAAGAATTTGGTGCCAAGATAGGGAATTTTGGTATGGCAGGTTGTGTCGAGAATGACACTGAGGACCCACATTTCTATTCCACTAACCCTGCCTCTTGGAGTCTTGGTTATTTGGCACCTGAATATGTGCACCAAGGCATAATTTCCCCAAGCATTGATATCTTTGCTTATGGGGTGGTTTTGTTGGAAGTTTTGTCTGGTCAAACACCTATAAGCAGGCCTAATGAGAAGGGAGAAGGAAGCATTTGGCTTACAGATAAAATCAAGTCCATTTTGGTGTCTGAAAATGTGAATGAACTAAGGGAGTGGATAGATAGTGCATTGGGGGAGAACTATTCATTTGATGCAGCTGTTGCACTTGCCAACATTGCAAGAGCTTGTGTGGAGGAAGATTCTTCTTTGAGACCAAGTGCAAGGGAAATTGTTGAGAAACTTTCAAGATTGGTGGAGGAATTACCACAAGGGGAACATCACATGTTAATGTGTGAAAGTTCAAGCAAACCTCTGGTGAAGGCAGTGGAAAACAATCTTGAATAA 2067 0.4146 MGTVDMIIAFHMKALVLFLWLFVPSLGKDLLSCETTSPDASGYHCIENVSHNQCETFALFLTNSYYSSLSNLTSYLGLNRFVIAQANGFSVDTEFLSQDQPILIPIECKCKGGFYQAELTKTTIKGESFYDIAQSLEGLTTCKAIWHNNPGVSPWNLDDKIRLVIPLRCACPFSSQVKPQPKLLLSYPVSEGDTISNLASKFNITKKAIVASNNISEGLRNRNIAPFTSILIPLNGKPIIGPLIKPKEPNSGFHTTSIAVTSSPHKKSLMWKTELCIGLAGVALGVCIAFAATFIFIRLKHKKEDENSSKEGDMELQHLNQSVRTTSTSDKKVSFEGSQDALDVKIVDSTPRKMLLETYTIEDARKATEGFSSSNHIEGSVYHGRLNGKNMAIKRTKAEVVSKIDLGLFHDALHHHPNILRLLGTSILEWKEQEESFLVFEYAKNGSLKDWLHGGLAIKNQFIASCYCFLTWSQRLRICLDVASALQYMHHVMNPSYVHRNVKSRNILLDEEFGAKIGNFGMAGCVENDTEDPHFYSTNPASWSLGYLAPEYVHQGIISPSIDIFAYGVVLLEVLSGQTPISRPNEKGEGSIWLTDKIKSILVSENVNELREWIDSALGENYSFDAAVALANIARACVEEDSSLRPSAREIVEKLSRLVEELPQGEHHMLMCESSSKPLVKAVENNLE 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste10g00032 688 SUPERFAMILY Protein kinase-like (PK-like) 354 655 IPR011009 -
Pste10g00032 688 Gene3D Phosphorylase Kinase; domain 1 345 442 - -
Pste10g00032 688 SMART LysM_2 186 233 IPR018392 -
Pste10g00032 688 Pfam Protein kinase domain 379 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste10g00032 688 Gene3D LysM domain 185 233 IPR036779 -
Pste10g00032 688 Pfam LysM domain 187 233 IPR018392 -
Pste10g00032 688 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 26 662 - -
Pste10g00032 688 FunFam PTI1-like tyrosine-protein kinase 3 443 669 - -
Pste10g00032 688 CDD LysM 186 232 IPR018392 -
Pste10g00032 688 ProSiteProfiles LysM domain profile. 185 232 IPR018392 -
Pste10g00032 688 Gene3D Transferase(Phosphotransferase) domain 1 443 674 - -
Pste10g00032 688 ProSiteProfiles Protein kinase domain profile. 361 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste10g00032 42 681 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 40.774 4.52e-150 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pste10g00032 Pkinase 2.8e-31 CL0016